RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 ZFPM1Q8IX07 1006 aa10.77□□□□□ -0.69
CHKA-207ENST00000533728 SMYD4Q8IYR2 804 aaPredicted RBP10.77□□□□□ -0.69
CHKA-207ENST00000533728 GUF1Q8N442 669 aaKnown RBP10.77□□□□□ -0.69
CHKA-207ENST00000533728 PDCL2Q8N4E4 241 aa10.77□□□□□ -0.69
CHKA-207ENST00000533728 ZNF507Q8TCN5 953 aa10.77□□□□□ -0.69
CHKA-207ENST00000533728 LRRC15Q8TF66 581 aa10.77□□□□□ -0.69
CHKA-207ENST00000533728 FAM151AQ8WW52 585 aa10.77□□□□□ -0.69
CHKA-207ENST00000533728 RAD54LQ92698 747 aa10.77□□□□□ -0.69
CHKA-207ENST00000533728 PNMA5Q96PV4 448 aa10.77□□□□□ -0.69
CHKA-207ENST00000533728 KCNMB3Q9NPA1 279 aa10.77□□□□□ -0.69
CHKA-207ENST00000533728 BLOC1S4Q9NUP1 217 aa10.77□□□□□ -0.69
CHKA-207ENST00000533728 TMEM260Q9NX78 707 aa10.77□□□□□ -0.69
CHKA-207ENST00000533728 DDX25Q9UHL0 483 aaKnown RBP10.77□□□□□ -0.69
CHKA-207ENST00000533728 GDAQ9Y2T3 454 aa10.77□□□□□ -0.69
CHKA-207ENST00000533728 ZFHX4Q86UP3 3567 aa10.77□□□□□ -0.69
CHKA-207ENST00000533728 SMCHD1A6NHR9 2005 aa10.77□□□□□ -0.69
CHKA-207ENST00000533728 ACACBO00763 2458 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 FAM86C2PA6NEL3 165 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 SPDYE2BA6NHP3 402 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 F5H6K3 240 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 PIK3CDO00329 1044 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 SLC37A4O43826 429 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 GNRH1P01148 92 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 TFRCP02786 760 aaKnown RBP10.76□□□□□ -0.69
CHKA-207ENST00000533728 GYPCP04921 128 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 CYP3A4P08684 503 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 SPDYE6P0CI01 402 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 CIITAP33076 1130 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 TXKP42681 527 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 TNNI2P48788 182 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 UBXN2AP68543 259 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 LRRC63Q05C16 580 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 KLRC3Q07444 240 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 RBL2Q08999 1139 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 KCTD2Q14681 263 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 KIF22Q14807 665 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 Q4G0T1 1027 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 SYDE2Q5VT97 1194 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 ZNF662Q6ZS27 426 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 FAM83AQ86UY5 434 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 ZSCAN29Q8IWY8 852 aaPredicted RBP10.76□□□□□ -0.69
CHKA-207ENST00000533728 TRIM47Q96LD4 638 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 ANO3Q9BYT9 981 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 ARHGAP39Q9C0H5 1083 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 ARHGEF10LQ9HCE6 1279 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 C11orf16Q9NQ32 467 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 GINM1Q9NU53 330 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 CGNQ9P2M7 1197 aaKnown RBP10.76□□□□□ -0.69
CHKA-207ENST00000533728 MYO1AQ9UBC5 1043 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 DNAI1Q9UI46 699 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 SCAF8Q9UPN6 1271 aaKnown RBP10.76□□□□□ -0.69
CHKA-207ENST00000533728 PCDHA1Q9Y5I3 950 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 OTOFQ9HC10 1997 aa10.76□□□□□ -0.69
CHKA-207ENST00000533728 XIRP2A4UGR9 3374 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 TDP2O95551 362 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 NDUFB10O96000 172 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 BMP3P12645 472 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 CAPN2P17655 700 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 SREBF1P36956 1147 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 TUBB4BP68371 445 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 MAP3K10Q02779 954 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 TCP10Q12799 353 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 PRKG1Q13976 671 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 SPDYE2Q495Y8 402 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 LDLRAD1Q5T700 205 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 CYP26C1Q6V0L0 522 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 SYT10Q6XYQ8 523 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 KCTD1Q719H9 257 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 FBXO11Q86XK2 927 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 CLEC10AQ8IUN9 316 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 ZNF710Q8N1W2 664 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 MB21D1Q8N884 522 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 SNX29Q8TEQ0 813 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 HAS1Q92839 578 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 SLC10A4Q96EP9 437 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 PRMT6Q96LA8 375 aaPredicted RBP10.75□□□□□ -0.69
CHKA-207ENST00000533728 FAM20AQ96MK3 541 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 ERGIC2Q96RQ1 377 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 DUSP9Q99956 384 aaKnown RBP10.75□□□□□ -0.69
CHKA-207ENST00000533728 SH2D4AQ9H788 454 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 BMP2KQ9NSY1 1161 aaPredicted RBP10.75□□□□□ -0.69
CHKA-207ENST00000533728 RNF216Q9NWF9 866 aaPredicted RBP10.75□□□□□ -0.69
CHKA-207ENST00000533728 PCDHA12Q9UN75 941 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 WDR81Q562E7 1941 aa10.75□□□□□ -0.69
CHKA-207ENST00000533728 RIF1Q5UIP0 2472 aaKnown RBP10.74□□□□□ -0.69
CHKA-207ENST00000533728 A0A1W2PQJ5 194 aa10.74□□□□□ -0.69
CHKA-207ENST00000533728 MYMKA6NI61 221 aa10.74□□□□□ -0.69
CHKA-207ENST00000533728 MEIS2O14770 477 aa10.74□□□□□ -0.69
CHKA-207ENST00000533728 KIF20AO95235 890 aa10.74□□□□□ -0.69
CHKA-207ENST00000533728 MUTP22033 750 aa10.74□□□□□ -0.69
CHKA-207ENST00000533728 SLC16A2P36021 539 aa10.74□□□□□ -0.69
CHKA-207ENST00000533728 ADKP55263 362 aaKnown RBP10.74□□□□□ -0.69
CHKA-207ENST00000533728 CDK17Q00537 523 aa10.74□□□□□ -0.69
CHKA-207ENST00000533728 ATP2B2Q01814 1243 aa10.74□□□□□ -0.69
CHKA-207ENST00000533728 UBXN1Q04323 297 aa10.74□□□□□ -0.69
CHKA-207ENST00000533728 NCBP1Q09161 790 aaKnown RBP10.74□□□□□ -0.69
CHKA-207ENST00000533728 DLGAP5Q15398 846 aa10.74□□□□□ -0.69
CHKA-207ENST00000533728 NBPF9Q3BBW0 867 aa10.74□□□□□ -0.69
CHKA-207ENST00000533728 HSP90AA4PQ58FG1 418 aa10.74□□□□□ -0.69
CHKA-207ENST00000533728 HAUS3Q68CZ6 603 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms