RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 MYH9P35579 1960 aaKnown RBP11.21□□□□□ -0.62
NUP98-220ENST00000533346 CUL9Q8IWT3 2517 aa11.2□□□□□ -0.62
NUP98-220ENST00000533346 SCN5AQ14524 2016 aa11.2□□□□□ -0.62
NUP98-220ENST00000533346 NRCAMQ92823 1304 aa11.2□□□□□ -0.62
NUP98-220ENST00000533346 CAND2O75155 1236 aa11.2□□□□□ -0.62
NUP98-220ENST00000533346 IQCF3P0C7M6 154 aa11.2□□□□□ -0.62
NUP98-220ENST00000533346 TCF7P36402 384 aaPredicted RBP11.2□□□□□ -0.62
NUP98-220ENST00000533346 SLC26A2P50443 739 aa11.2□□□□□ -0.62
NUP98-220ENST00000533346 SMAD3P84022 425 aaKnown RBP11.2□□□□□ -0.62
NUP98-220ENST00000533346 TRIM71Q2Q1W2 868 aaKnown RBP11.2□□□□□ -0.62
NUP98-220ENST00000533346 Q4G0T1 1027 aa11.2□□□□□ -0.62
NUP98-220ENST00000533346 TMEM240Q5SV17 173 aa11.2□□□□□ -0.62
NUP98-220ENST00000533346 C9orf50Q5SZB4 431 aa11.2□□□□□ -0.62
NUP98-220ENST00000533346 PSRC1Q6PGN9 363 aaPredicted RBP11.2□□□□□ -0.62
NUP98-220ENST00000533346 PLPPR4Q7Z2D5 763 aa11.2□□□□□ -0.62
NUP98-220ENST00000533346 SERINC5Q86VE9 423 aa11.2□□□□□ -0.62
NUP98-220ENST00000533346 CCDC155Q8N6L0 562 aa11.2□□□□□ -0.62
NUP98-220ENST00000533346 NSUN7Q8NE18 718 aaKnown RBP11.2□□□□□ -0.62
NUP98-220ENST00000533346 HERVK_113Q902F9 699 aa11.2□□□□□ -0.62
NUP98-220ENST00000533346 TNPO1Q92973 898 aaKnown RBP11.2□□□□□ -0.62
NUP98-220ENST00000533346 LENG9Q96B70 501 aa11.2□□□□□ -0.62
NUP98-220ENST00000533346 PGBD1Q96JS3 809 aa11.2□□□□□ -0.62
NUP98-220ENST00000533346 SDF4Q9BRK5 362 aa11.2□□□□□ -0.62
NUP98-220ENST00000533346 LLPHQ9BRT6 129 aaKnown RBP11.2□□□□□ -0.62
NUP98-220ENST00000533346 SMARCAD1Q9H4L7 1026 aa11.2□□□□□ -0.62
NUP98-220ENST00000533346 JPH1Q9HDC5 661 aaPredicted RBP11.2□□□□□ -0.62
NUP98-220ENST00000533346 SLC9A2Q9UBY0 812 aa11.2□□□□□ -0.62
NUP98-220ENST00000533346 ZNF215Q9UL58 517 aaPredicted RBP11.2□□□□□ -0.62
NUP98-220ENST00000533346 UMODL1Q5DID0 1318 aa11.19□□□□□ -0.62
NUP98-220ENST00000533346 LARGE1O95461 756 aa11.19□□□□□ -0.62
NUP98-220ENST00000533346 ZNF286BP0CG31 522 aa11.19□□□□□ -0.62
NUP98-220ENST00000533346 GNAT1P11488 350 aa11.19□□□□□ -0.62
NUP98-220ENST00000533346 CYP2C9P11712 490 aa11.19□□□□□ -0.62
NUP98-220ENST00000533346 CSF2RAP15509 400 aa11.19□□□□□ -0.62
NUP98-220ENST00000533346 CYP2C18P33260 490 aa11.19□□□□□ -0.62
NUP98-220ENST00000533346 ST3GAL1Q11201 340 aa11.19□□□□□ -0.62
NUP98-220ENST00000533346 ITGB3BPQ13352 177 aaPredicted RBP11.19□□□□□ -0.62
NUP98-220ENST00000533346 HIC1Q14526 733 aa11.19□□□□□ -0.62
NUP98-220ENST00000533346 FAM47CQ5HY64 1035 aa11.19□□□□□ -0.62
NUP98-220ENST00000533346 FAM43BQ6ZT52 329 aaPredicted RBP11.19□□□□□ -0.62
NUP98-220ENST00000533346 KRT25Q7Z3Z0 450 aa11.19□□□□□ -0.62
NUP98-220ENST00000533346 PLA2G4DQ86XP0 818 aa11.19□□□□□ -0.62
NUP98-220ENST00000533346 DHX38Q92620 1227 aaKnown RBP11.19□□□□□ -0.62
NUP98-220ENST00000533346 PCYT2Q99447 389 aa11.19□□□□□ -0.62
NUP98-220ENST00000533346 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.19□□□□□ -0.621e-9■■□□□ 14.5
NUP98-220ENST00000533346 PPP1R12CQ9BZL4 782 aa11.19□□□□□ -0.62
NUP98-220ENST00000533346 RNPEPQ9H4A4 650 aa11.19□□□□□ -0.62
NUP98-220ENST00000533346 SH2B1Q9NRF2 756 aaPredicted RBP11.19□□□□□ -0.62
NUP98-220ENST00000533346 ERAP1Q9NZ08 941 aa11.19□□□□□ -0.62
NUP98-220ENST00000533346 ORC3Q9UBD5 711 aaPredicted RBP11.19□□□□□ -0.62
NUP98-220ENST00000533346 TELO2Q9Y4R8 837 aa11.19□□□□□ -0.62
NUP98-220ENST00000533346 TMEM265A0A087WTH1 108 aa11.18□□□□□ -0.62
NUP98-220ENST00000533346 C17orf102A2RUQ5 167 aa11.18□□□□□ -0.62
NUP98-220ENST00000533346 IPO5O00410 1097 aaKnown RBP11.18□□□□□ -0.62
NUP98-220ENST00000533346 FGBP02675 491 aa11.18□□□□□ -0.62
NUP98-220ENST00000533346 CXCL10P02778 98 aa11.18□□□□□ -0.62
NUP98-220ENST00000533346 RPLP2P05387 115 aaKnown RBP11.18□□□□□ -0.62
NUP98-220ENST00000533346 SMIM10L2AP0DMW4 78 aa11.18□□□□□ -0.62
NUP98-220ENST00000533346 SMIM10L2BP0DMW5 78 aa11.18□□□□□ -0.62
NUP98-220ENST00000533346 ZNF76P36508 570 aa11.18□□□□□ -0.62
NUP98-220ENST00000533346 ACTR2P61160 394 aa11.18□□□□□ -0.62
NUP98-220ENST00000533346 GPNMBQ14956 572 aa11.18□□□□□ -0.62
NUP98-220ENST00000533346 RABEP1Q15276 862 aa11.18□□□□□ -0.62
NUP98-220ENST00000533346 PPP4R3AQ6IN85 833 aa11.18□□□□□ -0.62
NUP98-220ENST00000533346 ZNF746Q6NUN9 644 aaPredicted RBP11.18□□□□□ -0.62
NUP98-220ENST00000533346 TRAF7Q6Q0C0 670 aa11.18□□□□□ -0.62
NUP98-220ENST00000533346 B3GNT9Q6UX72 402 aa11.18□□□□□ -0.62
NUP98-220ENST00000533346 ABHD15Q6UXT9 468 aa11.18□□□□□ -0.62
NUP98-220ENST00000533346 SMAP1Q8IYB5 467 aaPredicted RBP11.18□□□□□ -0.62
NUP98-220ENST00000533346 RETREG2Q8NC44 543 aa11.18□□□□□ -0.62
NUP98-220ENST00000533346 TBCKQ8TEA7 893 aa11.18□□□□□ -0.62
NUP98-220ENST00000533346 AIFM3Q96NN9 605 aa11.18□□□□□ -0.62
NUP98-220ENST00000533346 RIT2Q99578 217 aa11.18□□□□□ -0.62
NUP98-220ENST00000533346 ALG1Q9BT22 464 aa11.18□□□□□ -0.62
NUP98-220ENST00000533346 TET1Q8NFU7 2136 aa11.18□□□□□ -0.62
NUP98-220ENST00000533346 EYSQ5T1H1 3165 aa11.18□□□□□ -0.62
NUP98-220ENST00000533346 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.17□□□□□ -0.62
NUP98-220ENST00000533346 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.17□□□□□ -0.62
NUP98-220ENST00000533346 MBLAC1A4D2B0 266 aaPredicted RBP11.17□□□□□ -0.62
NUP98-220ENST00000533346 RRN3P2A6NIE6 340 aa11.17□□□□□ -0.62
NUP98-220ENST00000533346 CKBP12277 381 aa11.17□□□□□ -0.62
NUP98-220ENST00000533346 SELPP16109 830 aa11.17□□□□□ -0.62
NUP98-220ENST00000533346 KRT76Q01546 638 aa11.17□□□□□ -0.62
NUP98-220ENST00000533346 NONOQ15233 471 aaKnown RBP eCLIP11.17□□□□□ -0.62
NUP98-220ENST00000533346 FAM26DQ5JW98 314 aa11.17□□□□□ -0.62
NUP98-220ENST00000533346 ZNF365Q70YC5 407 aa11.17□□□□□ -0.62
NUP98-220ENST00000533346 Q7L0L9 218 aa11.17□□□□□ -0.62
NUP98-220ENST00000533346 NECAB1Q8N987 351 aa11.17□□□□□ -0.62
NUP98-220ENST00000533346 RDM1Q8NG50 284 aa11.17□□□□□ -0.62
NUP98-220ENST00000533346 RASGRP4Q8TDF6 673 aa11.17□□□□□ -0.62
NUP98-220ENST00000533346 SLC5A5Q92911 643 aa11.17□□□□□ -0.62
NUP98-220ENST00000533346 TNFRSF25Q93038 417 aa11.17□□□□□ -0.62
NUP98-220ENST00000533346 NAP1L4Q99733 375 aaKnown RBP11.17□□□□□ -0.62
NUP98-220ENST00000533346 ZNF577Q9BSK1 485 aa11.17□□□□□ -0.62
NUP98-220ENST00000533346 NOD1Q9Y239 953 aa11.17□□□□□ -0.62
NUP98-220ENST00000533346 MAFBQ9Y5Q3 323 aaPredicted RBP11.17□□□□□ -0.62
NUP98-220ENST00000533346 SPTBN5Q9NRC6 3674 aaKnown RBP11.17□□□□□ -0.62
NUP98-220ENST00000533346 TBX3O15119 743 aa11.16□□□□□ -0.62
NUP98-220ENST00000533346 MSH4O15457 936 aa11.16□□□□□ -0.62
NUP98-220ENST00000533346 PPFIA3O75145 1194 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms