RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 NPLOC4Q8TAT6 608 aa17.89■□□□□ 0.45
TRIM3-213ENST00000533309 RAD54LQ92698 747 aa17.89■□□□□ 0.45
TRIM3-213ENST00000533309 USP6NLQ92738 828 aa17.89■□□□□ 0.45
TRIM3-213ENST00000533309 MAML3Q96JK9 1138 aa17.89■□□□□ 0.45
TRIM3-213ENST00000533309 HOOK1Q9UJC3 728 aaKnown RBP17.89■□□□□ 0.45
TRIM3-213ENST00000533309 KIAA1024Q9UPX6 916 aa17.89■□□□□ 0.45
TRIM3-213ENST00000533309 SLITRK3O94933 977 aa17.88■□□□□ 0.45
TRIM3-213ENST00000533309 CCDC192P0DO97 292 aa17.88■□□□□ 0.45
TRIM3-213ENST00000533309 UBA1P22314 1058 aaKnown RBP17.88■□□□□ 0.45
TRIM3-213ENST00000533309 MAP2K2P36507 400 aa17.88■□□□□ 0.45
TRIM3-213ENST00000533309 SARSP49591 514 aaKnown RBP17.88■□□□□ 0.45
TRIM3-213ENST00000533309 KRT76Q01546 638 aa17.88■□□□□ 0.45
TRIM3-213ENST00000533309 MAP2K5Q13163 448 aa17.88■□□□□ 0.45
TRIM3-213ENST00000533309 NT5DC1Q5TFE4 455 aa17.88■□□□□ 0.45
TRIM3-213ENST00000533309 MIER3Q7Z3K6 550 aa17.88■□□□□ 0.45
TRIM3-213ENST00000533309 LARP4BQ92615 738 aaKnown RBP17.88■□□□□ 0.45
TRIM3-213ENST00000533309 CCDC34Q96HJ3 373 aa17.88■□□□□ 0.45
TRIM3-213ENST00000533309 DYDC2Q96IM9 177 aa17.88■□□□□ 0.45
TRIM3-213ENST00000533309 SENP7Q9BQF6 1050 aa17.88■□□□□ 0.45
TRIM3-213ENST00000533309 KATNBL1Q9H079 304 aa17.88■□□□□ 0.45
TRIM3-213ENST00000533309 TSPY26PQ9H489 355 aa17.88■□□□□ 0.45
TRIM3-213ENST00000533309 TUFT1Q9NNX1 390 aa17.88■□□□□ 0.45
TRIM3-213ENST00000533309 WRAP73Q9P2S5 460 aaPredicted RBP17.88■□□□□ 0.45
TRIM3-213ENST00000533309 TELO2Q9Y4R8 837 aa17.88■□□□□ 0.45
TRIM3-213ENST00000533309 E9PMD0 336 aa17.87■□□□□ 0.45
TRIM3-213ENST00000533309 GTPBP6O43824 516 aaPredicted RBP17.87■□□□□ 0.45
TRIM3-213ENST00000533309 ARIH2O95376 493 aa17.87■□□□□ 0.45
TRIM3-213ENST00000533309 CUL4BQ13620 913 aa17.87■□□□□ 0.45
TRIM3-213ENST00000533309 MCM6Q14566 821 aa17.87■□□□□ 0.45
TRIM3-213ENST00000533309 ZNF746Q6NUN9 644 aaPredicted RBP17.87■□□□□ 0.45
TRIM3-213ENST00000533309 SASS6Q6UVJ0 657 aa17.87■□□□□ 0.45
TRIM3-213ENST00000533309 CFHR5Q9BXR6 569 aa17.87■□□□□ 0.45
TRIM3-213ENST00000533309 JPH1Q9HDC5 661 aaPredicted RBP17.87■□□□□ 0.45
TRIM3-213ENST00000533309 FSD2A1L4K1 749 aa17.87■□□□□ 0.45
TRIM3-213ENST00000533309 WDR64B1ANS9 1081 aa17.87■□□□□ 0.45
TRIM3-213ENST00000533309 SNAI1O95863 264 aaPredicted RBP17.87■□□□□ 0.45
TRIM3-213ENST00000533309 HOXC6P09630 235 aa17.87■□□□□ 0.45
TRIM3-213ENST00000533309 TGFB3P10600 412 aa17.87■□□□□ 0.45
TRIM3-213ENST00000533309 PSMC6P62333 389 aa17.87■□□□□ 0.45
TRIM3-213ENST00000533309 CTTNQ14247 550 aaKnown RBP17.87■□□□□ 0.45
TRIM3-213ENST00000533309 CCDC62Q6P9F0 684 aa17.87■□□□□ 0.45
TRIM3-213ENST00000533309 NEK9Q8TD19 979 aa17.87■□□□□ 0.45
TRIM3-213ENST00000533309 BLZF1Q9H2G9 400 aa17.87■□□□□ 0.45
TRIM3-213ENST00000533309 SLC9A2Q9UBY0 812 aa17.87■□□□□ 0.45
TRIM3-213ENST00000533309 GJD2Q9UKL4 321 aa17.87■□□□□ 0.45
TRIM3-213ENST00000533309 BIN1O00499 593 aa17.86■□□□□ 0.45
TRIM3-213ENST00000533309 TNPO2O14787 897 aaKnown RBP17.86■□□□□ 0.45
TRIM3-213ENST00000533309 TBC1D8O95759 1140 aa17.86■□□□□ 0.45
TRIM3-213ENST00000533309 MUTP22033 750 aa17.86■□□□□ 0.45
TRIM3-213ENST00000533309 SFNP31947 248 aa17.86■□□□□ 0.45
TRIM3-213ENST00000533309 JAK3P52333 1124 aa17.86■□□□□ 0.45
TRIM3-213ENST00000533309 BANK1Q8NDB2 785 aa17.86■□□□□ 0.45
TRIM3-213ENST00000533309 RDM1Q8NG50 284 aa17.86■□□□□ 0.45
TRIM3-213ENST00000533309 SMARCE1Q969G3 411 aa17.86■□□□□ 0.45
TRIM3-213ENST00000533309 LXNQ9BS40 222 aa17.86■□□□□ 0.45
TRIM3-213ENST00000533309 ARHGAP39Q9C0H5 1083 aa17.86■□□□□ 0.45
TRIM3-213ENST00000533309 PDGFCQ9NRA1 345 aa17.86■□□□□ 0.45
TRIM3-213ENST00000533309 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.86■□□□□ 0.45
TRIM3-213ENST00000533309 DDX41Q9UJV9 622 aaKnown RBP17.86■□□□□ 0.45
TRIM3-213ENST00000533309 SYNGAP1Q96PV0 1343 aa17.86■□□□□ 0.45
TRIM3-213ENST00000533309 CASP8AP2Q9UKL3 1982 aa17.86■□□□□ 0.45
TRIM3-213ENST00000533309 ARID2Q68CP9 1835 aa17.85■□□□□ 0.45
TRIM3-213ENST00000533309 SORBS3O60504 671 aa17.85■□□□□ 0.45
TRIM3-213ENST00000533309 FARP2O94887 1054 aaPredicted RBP17.85■□□□□ 0.45
TRIM3-213ENST00000533309 MYL1P05976 194 aa17.85■□□□□ 0.45
TRIM3-213ENST00000533309 LACTBP83111 547 aaPredicted RBP17.85■□□□□ 0.45
TRIM3-213ENST00000533309 STX1AQ16623 288 aa17.85■□□□□ 0.45
TRIM3-213ENST00000533309 LY6KQ17RY6 165 aa17.85■□□□□ 0.45
TRIM3-213ENST00000533309 TAPT1Q6NXT6 567 aa17.85■□□□□ 0.45
TRIM3-213ENST00000533309 SV2BQ7L1I2 683 aa17.85■□□□□ 0.45
TRIM3-213ENST00000533309 CYFIP1Q7L576 1253 aa17.85■□□□□ 0.45
TRIM3-213ENST00000533309 TPH2Q8IWU9 490 aa17.85■□□□□ 0.45
TRIM3-213ENST00000533309 KCTD17Q8N5Z5 321 aa17.85■□□□□ 0.45
TRIM3-213ENST00000533309 SOCS4Q8WXH5 440 aa17.85■□□□□ 0.45
TRIM3-213ENST00000533309 TRIM47Q96LD4 638 aa17.85■□□□□ 0.45
TRIM3-213ENST00000533309 TINF2Q9BSI4 451 aa17.85■□□□□ 0.45
TRIM3-213ENST00000533309 TRIM9Q9C026 710 aa17.85■□□□□ 0.45
TRIM3-213ENST00000533309 VTA1Q9NP79 307 aa17.85■□□□□ 0.45
TRIM3-213ENST00000533309 RNF186Q9NXI6 227 aa17.85■□□□□ 0.45
TRIM3-213ENST00000533309 TCEAL9Q9UHQ7 104 aa17.85■□□□□ 0.45
TRIM3-213ENST00000533309 MAN1B1Q9UKM7 699 aa17.85■□□□□ 0.45
TRIM3-213ENST00000533309 MYMKA6NI61 221 aa17.84■□□□□ 0.45
TRIM3-213ENST00000533309 P4HBP07237 508 aaKnown RBP17.84■□□□□ 0.45
TRIM3-213ENST00000533309 PLA2G4BP0C869 781 aa17.84■□□□□ 0.45
TRIM3-213ENST00000533309 BMP6P22004 513 aa17.84■□□□□ 0.45
TRIM3-213ENST00000533309 ACTR2P61160 394 aa17.84■□□□□ 0.45
TRIM3-213ENST00000533309 CAP1Q01518 475 aa17.84■□□□□ 0.45
TRIM3-213ENST00000533309 DHX8Q14562 1220 aaKnown RBP17.84■□□□□ 0.45
TRIM3-213ENST00000533309 UGCGQ16739 394 aa17.84■□□□□ 0.45
TRIM3-213ENST00000533309 KCNV1Q6PIU1 500 aa17.84■□□□□ 0.45
TRIM3-213ENST00000533309 SMAP1Q8IYB5 467 aaPredicted RBP17.84■□□□□ 0.45
TRIM3-213ENST00000533309 MSL3Q8N5Y2 521 aaKnown RBP17.84■□□□□ 0.45
TRIM3-213ENST00000533309 C7orf25Q9BPX7 421 aa17.84■□□□□ 0.45
TRIM3-213ENST00000533309 SLC5A4Q9NY91 659 aa17.84■□□□□ 0.45
TRIM3-213ENST00000533309 FLRT1Q9NZU1 646 aa17.84■□□□□ 0.45
TRIM3-213ENST00000533309 SAMM50Q9Y512 469 aa17.84■□□□□ 0.45
TRIM3-213ENST00000533309 PCDHA10Q9Y5I2 948 aa17.84■□□□□ 0.45
TRIM3-213ENST00000533309 RBM47A0AV96 593 aaKnown RBP17.83■□□□□ 0.45
TRIM3-213ENST00000533309 KLRC4O43908 158 aa17.83■□□□□ 0.45
TRIM3-213ENST00000533309 TRPA1O75762 1119 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms