RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 EMSYQ7Z589 1322 aa23.23■■□□□ 1.31
CCS-208ENST00000533244 LGR5O75473 907 aa23.23■■□□□ 1.31
CCS-208ENST00000533244 CYP2C9P11712 490 aa23.23■■□□□ 1.31
CCS-208ENST00000533244 PRR16Q569H4 304 aa23.23■■□□□ 1.31
CCS-208ENST00000533244 TDHQ8IZJ6 230 aa23.23■■□□□ 1.31
CCS-208ENST00000533244 TNFRSF25Q93038 417 aa23.23■■□□□ 1.31
CCS-208ENST00000533244 ATG7O95352 703 aa23.22■■□□□ 1.31
CCS-208ENST00000533244 CCNE2O96020 404 aa23.22■■□□□ 1.31
CCS-208ENST00000533244 MMP1P03956 469 aa23.22■■□□□ 1.31
CCS-208ENST00000533244 CYP2C18P33260 490 aa23.22■■□□□ 1.31
CCS-208ENST00000533244 ACTR2P61160 394 aa23.22■■□□□ 1.31
CCS-208ENST00000533244 FPGSQ05932 587 aa23.22■■□□□ 1.31
CCS-208ENST00000533244 HIC1Q14526 733 aa23.22■■□□□ 1.31
CCS-208ENST00000533244 PTGISQ16647 500 aa23.22■■□□□ 1.31
CCS-208ENST00000533244 UTP14CQ5TAP6 766 aaKnown RBP23.22■■□□□ 1.31
CCS-208ENST00000533244 PCYT2Q99447 389 aa23.22■■□□□ 1.31
CCS-208ENST00000533244 ZNF577Q9BSK1 485 aa23.22■■□□□ 1.31
CCS-208ENST00000533244 WNT8AQ9H1J5 351 aa23.22■■□□□ 1.31
CCS-208ENST00000533244 ZNF215Q9UL58 517 aaPredicted RBP23.22■■□□□ 1.31
CCS-208ENST00000533244 LAMA3Q16787 3333 aa23.22■■□□□ 1.31
CCS-208ENST00000533244 KRT2P35908 639 aa23.21■■□□□ 1.31
CCS-208ENST00000533244 EPHB4P54760 987 aa23.21■■□□□ 1.31
CCS-208ENST00000533244 HMGN5P82970 282 aaKnown RBP23.21■■□□□ 1.31
CCS-208ENST00000533244 INF2Q27J81 1249 aa23.21■■□□□ 1.31
CCS-208ENST00000533244 Q4G0T1 1027 aa23.21■■□□□ 1.31
CCS-208ENST00000533244 KRT40Q6A162 431 aa23.21■■□□□ 1.31
CCS-208ENST00000533244 TBC1D22BQ9NU19 505 aa23.21■■□□□ 1.31
CCS-208ENST00000533244 IGKV6D-21A0A0A0MT36 114 aa23.2■■□□□ 1.3
CCS-208ENST00000533244 CCDC194A0A1B0GVG4 234 aa23.2■■□□□ 1.3
CCS-208ENST00000533244 PITPNM1O00562 1244 aa23.2■■□□□ 1.3
CCS-208ENST00000533244 MSH4O15457 936 aa23.2■■□□□ 1.3
CCS-208ENST00000533244 TDP2O95551 362 aa23.2■■□□□ 1.3
CCS-208ENST00000533244 SMIM10L2AP0DMW4 78 aa23.2■■□□□ 1.3
CCS-208ENST00000533244 SMIM10L2BP0DMW5 78 aa23.2■■□□□ 1.3
CCS-208ENST00000533244 MCM2P49736 904 aa23.2■■□□□ 1.3
CCS-208ENST00000533244 RBL2Q08999 1139 aa23.2■■□□□ 1.3
CCS-208ENST00000533244 EARS2Q5JPH6 523 aaKnown RBP23.2■■□□□ 1.3
CCS-208ENST00000533244 TMEM199Q8N511 208 aa23.2■■□□□ 1.3
CCS-208ENST00000533244 DHX38Q92620 1227 aaKnown RBP23.2■■□□□ 1.3
CCS-208ENST00000533244 TMX3Q96JJ7 454 aa23.2■■□□□ 1.3
CCS-208ENST00000533244 TANC1Q9C0D5 1861 aa23.19■■□□□ 1.3
CCS-208ENST00000533244 NR5A1Q13285 461 aa23.19■■□□□ 1.3
CCS-208ENST00000533244 SMARCAD1Q9H4L7 1026 aa23.19■■□□□ 1.3
CCS-208ENST00000533244 BRMS1Q9HCU9 246 aa23.19■■□□□ 1.3
CCS-208ENST00000533244 ERAP1Q9NZ08 941 aa23.19■■□□□ 1.3
CCS-208ENST00000533244 NOD1Q9Y239 953 aa23.19■■□□□ 1.3
CCS-208ENST00000533244 CSF2RAP15509 400 aa23.18■■□□□ 1.3
CCS-208ENST00000533244 ADAM17P78536 824 aa23.18■■□□□ 1.3
CCS-208ENST00000533244 PTK7Q13308 1070 aa23.18■■□□□ 1.3
CCS-208ENST00000533244 PPIGQ13427 754 aaKnown RBP eCLIP23.18■■□□□ 1.31e-6■■□□□ 14.5
CCS-208ENST00000533244 TRIM29Q14134 588 aa23.18■■□□□ 1.3
CCS-208ENST00000533244 ZNF746Q6NUN9 644 aaPredicted RBP23.18■■□□□ 1.3
CCS-208ENST00000533244 ABHD15Q6UXT9 468 aa23.18■■□□□ 1.3
CCS-208ENST00000533244 PIK3AP1Q6ZUJ8 805 aa23.18■■□□□ 1.3
CCS-208ENST00000533244 NEK8Q86SG6 692 aa23.18■■□□□ 1.3
CCS-208ENST00000533244 DIS3L2Q8IYB7 885 aaKnown RBP23.18■■□□□ 1.3
CCS-208ENST00000533244 CAGE1Q8TC20 777 aa23.18■■□□□ 1.3
CCS-208ENST00000533244 SLC5A5Q92911 643 aa23.18■■□□□ 1.3
CCS-208ENST00000533244 RNPEPQ9H4A4 650 aa23.18■■□□□ 1.3
CCS-208ENST00000533244 TRIP12Q14669 1992 aaPredicted RBP23.18■■□□□ 1.3
CCS-208ENST00000533244 C17orf102A2RUQ5 167 aa23.17■■□□□ 1.3
CCS-208ENST00000533244 DDX39AO00148 427 aaKnown RBP23.17■■□□□ 1.3
CCS-208ENST00000533244 ZNF200P98182 395 aaPredicted RBP23.17■■□□□ 1.3
CCS-208ENST00000533244 TRIM71Q2Q1W2 868 aaKnown RBP23.17■■□□□ 1.3
CCS-208ENST00000533244 C9orf50Q5SZB4 431 aa23.17■■□□□ 1.3
CCS-208ENST00000533244 PPP4R3AQ6IN85 833 aa23.17■■□□□ 1.3
CCS-208ENST00000533244 PLPPR4Q7Z2D5 763 aa23.17■■□□□ 1.3
CCS-208ENST00000533244 UIMC1Q96RL1 719 aa23.17■■□□□ 1.3
CCS-208ENST00000533244 RIT2Q99578 217 aa23.17■■□□□ 1.3
CCS-208ENST00000533244 FAM205CA6NFA0 338 aa23.16■■□□□ 1.3
CCS-208ENST00000533244 BTBD18B2RXH4 712 aa23.16■■□□□ 1.3
CCS-208ENST00000533244 GCFC2P16383 781 aaKnown RBP23.16■■□□□ 1.3
CCS-208ENST00000533244 CCL23P55773 120 aa23.16■■□□□ 1.3
CCS-208ENST00000533244 KRT76Q01546 638 aa23.16■■□□□ 1.3
CCS-208ENST00000533244 BFSP2Q13515 415 aa23.16■■□□□ 1.3
CCS-208ENST00000533244 SHHQ15465 462 aa23.16■■□□□ 1.3
CCS-208ENST00000533244 LETM2Q2VYF4 491 aa23.16■■□□□ 1.3
CCS-208ENST00000533244 LRIT3Q3SXY7 679 aa23.16■■□□□ 1.3
CCS-208ENST00000533244 C16orf59Q7L2K0 433 aa23.16■■□□□ 1.3
CCS-208ENST00000533244 SERINC5Q86VE9 423 aa23.16■■□□□ 1.3
CCS-208ENST00000533244 ETNPPLQ8TBG4 499 aa23.16■■□□□ 1.3
CCS-208ENST00000533244 AFAP1L1Q8TED9 768 aa23.16■■□□□ 1.3
CCS-208ENST00000533244 GLG1Q92896 1179 aa23.16■■□□□ 1.3
CCS-208ENST00000533244 VWCEQ96DN2 955 aa23.16■■□□□ 1.3
CCS-208ENST00000533244 FXR1P51114 621 aaKnown RBP eCLIP23.16■■□□□ 1.3
CCS-208ENST00000533244 FOSBP53539 338 aa23.16■■□□□ 1.3
CCS-208ENST00000533244 SMAP1Q8IYB5 467 aaPredicted RBP23.16■■□□□ 1.3
CCS-208ENST00000533244 CCDC155Q8N6L0 562 aa23.16■■□□□ 1.3
CCS-208ENST00000533244 FBXO18Q8NFZ0 1043 aa23.16■■□□□ 1.3
CCS-208ENST00000533244 LMBR1Q8WVP7 490 aa23.16■■□□□ 1.3
CCS-208ENST00000533244 WNT8BQ93098 351 aa23.16■■□□□ 1.3
CCS-208ENST00000533244 C8orf76Q96K31 380 aa23.16■■□□□ 1.3
CCS-208ENST00000533244 AZI2Q9H6S1 392 aa23.16■■□□□ 1.3
CCS-208ENST00000533244 IL23AQ9NPF7 189 aa23.16■■□□□ 1.3
CCS-208ENST00000533244 SETD4Q9NVD3 440 aa23.16■■□□□ 1.3
CCS-208ENST00000533244 DDX25Q9UHL0 483 aaKnown RBP23.16■■□□□ 1.3
CCS-208ENST00000533244 NRCAMQ92823 1304 aa23.15■■□□□ 1.3
CCS-208ENST00000533244 SLC37A4O43826 429 aa23.15■■□□□ 1.3
CCS-208ENST00000533244 PSMD10O75832 226 aa23.15■■□□□ 1.3
CCS-208ENST00000533244 MARK3P27448 753 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms