RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 ADGRA3Q8IWK6 1321 aa13.09□□□□□ -0.31
TRAPPC4-213ENST00000533149 C17orf102A2RUQ5 167 aa13.09□□□□□ -0.31
TRAPPC4-213ENST00000533149 NMT2O60551 498 aa13.09□□□□□ -0.31
TRAPPC4-213ENST00000533149 LINC00271P0C7V0 271 aa13.09□□□□□ -0.31
TRAPPC4-213ENST00000533149 HOXD8P13378 290 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC4-213ENST00000533149 NOVP48745 357 aa13.09□□□□□ -0.31
TRAPPC4-213ENST00000533149 RABEP1Q15276 862 aa13.09□□□□□ -0.31
TRAPPC4-213ENST00000533149 NAALADL2Q58DX5 795 aa13.09□□□□□ -0.31
TRAPPC4-213ENST00000533149 ATP6V0A1Q93050 837 aa13.09□□□□□ -0.31
TRAPPC4-213ENST00000533149 P2RX5Q93086 422 aa13.09□□□□□ -0.31
TRAPPC4-213ENST00000533149 GPCPD1Q9NPB8 672 aa13.09□□□□□ -0.31
TRAPPC4-213ENST00000533149 PLAGL2Q9UPG8 496 aa13.09□□□□□ -0.31
TRAPPC4-213ENST00000533149 CACNA1HO95180 2353 aa13.09□□□□□ -0.31
TRAPPC4-213ENST00000533149 MYO7AQ13402 2215 aa13.08□□□□□ -0.32
TRAPPC4-213ENST00000533149 EIF3JO75822 258 aaKnown RBP13.08□□□□□ -0.32
TRAPPC4-213ENST00000533149 CSPG5O95196 566 aa13.08□□□□□ -0.32
TRAPPC4-213ENST00000533149 BTG3Q14201 252 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC4-213ENST00000533149 HIC1Q14526 733 aa13.08□□□□□ -0.32
TRAPPC4-213ENST00000533149 TSGA10IPQ3SY00 556 aa13.08□□□□□ -0.32
TRAPPC4-213ENST00000533149 ZBTB33Q86T24 672 aa13.08□□□□□ -0.32
TRAPPC4-213ENST00000533149 ADSSL1Q8N142 457 aa13.08□□□□□ -0.32
TRAPPC4-213ENST00000533149 MRVI1Q9Y6F6 885 aa13.08□□□□□ -0.32
TRAPPC4-213ENST00000533149 TAF6LQ9Y6J9 622 aa13.08□□□□□ -0.32
TRAPPC4-213ENST00000533149 FRMPD2Q68DX3 1309 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC4-213ENST00000533149 ATG2AQ2TAZ0 1938 aa13.07□□□□□ -0.32
TRAPPC4-213ENST00000533149 FSD2A1L4K1 749 aa13.07□□□□□ -0.32
TRAPPC4-213ENST00000533149 RANBP6O60518 1105 aaKnown RBP13.07□□□□□ -0.32
TRAPPC4-213ENST00000533149 CYP21A2P08686 494 aa13.07□□□□□ -0.32
TRAPPC4-213ENST00000533149 TOP1P11387 765 aaKnown RBP13.07□□□□□ -0.32
TRAPPC4-213ENST00000533149 CAMK1Q14012 370 aa13.07□□□□□ -0.32
TRAPPC4-213ENST00000533149 RMDN3Q96TC7 470 aa13.07□□□□□ -0.32
TRAPPC4-213ENST00000533149 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRAPPC4-213ENST00000533149 TRIOO75962 3097 aa13.07□□□□□ -0.32
TRAPPC4-213ENST00000533149 SPTBN4Q9H254 2564 aa13.06□□□□□ -0.32
TRAPPC4-213ENST00000533149 RBAK-RBAKDNI3L0D1 243 aa13.06□□□□□ -0.32
TRAPPC4-213ENST00000533149 CTSHP09668 335 aa13.06□□□□□ -0.32
TRAPPC4-213ENST00000533149 GNAT1P11488 350 aa13.06□□□□□ -0.32
TRAPPC4-213ENST00000533149 HOXC8P31273 242 aa13.06□□□□□ -0.32
TRAPPC4-213ENST00000533149 NRIP1P48552 1158 aa13.06□□□□□ -0.32
TRAPPC4-213ENST00000533149 NEK4P51957 841 aa13.06□□□□□ -0.32
TRAPPC4-213ENST00000533149 IMMTQ16891 758 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-213ENST00000533149 ADCK5Q3MIX3 580 aa13.06□□□□□ -0.32
TRAPPC4-213ENST00000533149 USH1GQ495M9 461 aa13.06□□□□□ -0.32
TRAPPC4-213ENST00000533149 ARHGEF16Q5VV41 709 aa13.06□□□□□ -0.32
TRAPPC4-213ENST00000533149 KCNV1Q6PIU1 500 aa13.06□□□□□ -0.32
TRAPPC4-213ENST00000533149 MCF2L2Q86YR7 1114 aa13.06□□□□□ -0.32
TRAPPC4-213ENST00000533149 SYTL5Q8TDW5 730 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC4-213ENST00000533149 SPATA33Q96N06 139 aa13.06□□□□□ -0.32
TRAPPC4-213ENST00000533149 JAKMIP1Q96N16 626 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-213ENST00000533149 TAAR1Q96RJ0 339 aa13.06□□□□□ -0.32
TRAPPC4-213ENST00000533149 TM6SF1Q9BZW5 370 aa13.06□□□□□ -0.32
TRAPPC4-213ENST00000533149 RC3H2Q9HBD1 1191 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-213ENST00000533149 BARX2Q9UMQ3 279 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC4-213ENST00000533149 C5orf42Q9H799 3197 aa13.05□□□□□ -0.32
TRAPPC4-213ENST00000533149 H3BRB1 525 aa13.05□□□□□ -0.32
TRAPPC4-213ENST00000533149 ZNF213O14771 459 aa13.05□□□□□ -0.32
TRAPPC4-213ENST00000533149 TREHO43280 583 aa13.05□□□□□ -0.32
TRAPPC4-213ENST00000533149 PDGFBP01127 241 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC4-213ENST00000533149 HAND2P61296 217 aa13.05□□□□□ -0.32
TRAPPC4-213ENST00000533149 KRT32Q14532 448 aa13.05□□□□□ -0.32
TRAPPC4-213ENST00000533149 MYSM1Q5VVJ2 828 aa13.05□□□□□ -0.32
TRAPPC4-213ENST00000533149 FRMD5Q7Z6J6 570 aa13.05□□□□□ -0.32
TRAPPC4-213ENST00000533149 ADGRD2Q7Z7M1 963 aa13.05□□□□□ -0.32
TRAPPC4-213ENST00000533149 UBALD2Q8IYN6 164 aa13.05□□□□□ -0.32
TRAPPC4-213ENST00000533149 SUSD6Q92537 303 aa13.05□□□□□ -0.32
TRAPPC4-213ENST00000533149 ZNF689Q96CS4 500 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC4-213ENST00000533149 IPO9Q96P70 1041 aaKnown RBP13.05□□□□□ -0.32
TRAPPC4-213ENST00000533149 TMEM47Q9BQJ4 181 aa13.05□□□□□ -0.32
TRAPPC4-213ENST00000533149 C16orf70Q9BSU1 422 aa13.05□□□□□ -0.32
TRAPPC4-213ENST00000533149 OSBPL7Q9BZF2 842 aa13.05□□□□□ -0.32
TRAPPC4-213ENST00000533149 TUT1Q9H6E5 874 aaKnown RBP13.05□□□□□ -0.32
TRAPPC4-213ENST00000533149 ZSWIM6Q9HCJ5 1215 aa13.05□□□□□ -0.32
TRAPPC4-213ENST00000533149 GLP2RO95838 553 aa13.04□□□□□ -0.32
TRAPPC4-213ENST00000533149 ITGB1P05556 798 aa13.04□□□□□ -0.32
TRAPPC4-213ENST00000533149 SMIM10L2AP0DMW4 78 aa13.04□□□□□ -0.32
TRAPPC4-213ENST00000533149 SMIM10L2BP0DMW5 78 aa13.04□□□□□ -0.32
TRAPPC4-213ENST00000533149 PDHBP11177 359 aa13.04□□□□□ -0.32
TRAPPC4-213ENST00000533149 DNAJB1P25685 340 aa13.04□□□□□ -0.32
TRAPPC4-213ENST00000533149 PSMA5P28066 241 aa13.04□□□□□ -0.32
TRAPPC4-213ENST00000533149 ZNF543Q08ER8 600 aa13.04□□□□□ -0.32
TRAPPC4-213ENST00000533149 HSDL1Q3SXM5 330 aa13.04□□□□□ -0.32
TRAPPC4-213ENST00000533149 FAM26DQ5JW98 314 aa13.04□□□□□ -0.32
TRAPPC4-213ENST00000533149 CELF3Q5SZQ8 465 aaKnown RBP13.04□□□□□ -0.32
TRAPPC4-213ENST00000533149 DGLUCYQ7Z3D6 616 aa13.04□□□□□ -0.32
TRAPPC4-213ENST00000533149 RBM23Q86U06 439 aaKnown RBP13.04□□□□□ -0.32
TRAPPC4-213ENST00000533149 TMEM105Q8N8V8 129 aa13.04□□□□□ -0.32
TRAPPC4-213ENST00000533149 SPPL3Q8TCT6 385 aa13.04□□□□□ -0.32
TRAPPC4-213ENST00000533149 SNX21Q969T3 373 aa13.04□□□□□ -0.32
TRAPPC4-213ENST00000533149 RNPEPQ9H4A4 650 aa13.04□□□□□ -0.32
TRAPPC4-213ENST00000533149 TLE6Q9H808 572 aa13.04□□□□□ -0.32
TRAPPC4-213ENST00000533149 ABCB11O95342 1321 aa13.04□□□□□ -0.32
TRAPPC4-213ENST00000533149 KIAA1217Q5T5P2 1943 aa13.03□□□□□ -0.32
TRAPPC4-213ENST00000533149 E7EWF7 191 aa13.03□□□□□ -0.32
TRAPPC4-213ENST00000533149 ORC4O43929 436 aa13.03□□□□□ -0.32
TRAPPC4-213ENST00000533149 DGKIO75912 1065 aa13.03□□□□□ -0.32
TRAPPC4-213ENST00000533149 NR3C2P08235 984 aa13.03□□□□□ -0.32
TRAPPC4-213ENST00000533149 SRGAP2BP0DMP2 458 aa13.03□□□□□ -0.32
TRAPPC4-213ENST00000533149 CPA1P15085 419 aa13.03□□□□□ -0.32
TRAPPC4-213ENST00000533149 CTDSPL2Q05D32 466 aa13.03□□□□□ -0.32
TRAPPC4-213ENST00000533149 MTMR3Q13615 1198 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms