RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 SERINC5Q86VE9 423 aa19.66■□□□□ 0.74
PHRF1-204ENST00000532550 TRIM50Q86XT4 487 aa19.66■□□□□ 0.74
PHRF1-204ENST00000532550 TRIM22Q8IYM9 498 aa19.66■□□□□ 0.74
PHRF1-204ENST00000532550 SLC17A8Q8NDX2 589 aa19.66■□□□□ 0.74
PHRF1-204ENST00000532550 BICD2Q8TD16 824 aa19.66■□□□□ 0.74
PHRF1-204ENST00000532550 SDF4Q9BRK5 362 aa19.66■□□□□ 0.74
PHRF1-204ENST00000532550 SETD4Q9NVD3 440 aa19.66■□□□□ 0.74
PHRF1-204ENST00000532550 MEIS1O00470 390 aa19.65■□□□□ 0.74
PHRF1-204ENST00000532550 TREHO43280 583 aa19.65■□□□□ 0.74
PHRF1-204ENST00000532550 ARP10275 920 aa19.65■□□□□ 0.74
PHRF1-204ENST00000532550 THPOP40225 353 aa19.65■□□□□ 0.74
PHRF1-204ENST00000532550 ARHGAP4P98171 946 aa19.65■□□□□ 0.74
PHRF1-204ENST00000532550 SSRP1Q08945 709 aaKnown RBP19.65■□□□□ 0.74
PHRF1-204ENST00000532550 TRIM71Q2Q1W2 868 aaKnown RBP19.65■□□□□ 0.74
PHRF1-204ENST00000532550 ZNF618Q5T7W0 954 aa19.65■□□□□ 0.74
PHRF1-204ENST00000532550 CPLX2Q6PUV4 134 aaKnown RBP19.65■□□□□ 0.74
PHRF1-204ENST00000532550 REXO1Q8N1G1 1221 aaKnown RBP19.65■□□□□ 0.74
PHRF1-204ENST00000532550 CCDC148Q8NFR7 591 aa19.65■□□□□ 0.74
PHRF1-204ENST00000532550 GLG1Q92896 1179 aa19.65■□□□□ 0.74
PHRF1-204ENST00000532550 LARP6Q9BRS8 491 aaKnown RBP19.65■□□□□ 0.74
PHRF1-204ENST00000532550 SMARCAD1Q9H4L7 1026 aa19.65■□□□□ 0.74
PHRF1-204ENST00000532550 JPH1Q9HDC5 661 aaPredicted RBP19.65■□□□□ 0.74
PHRF1-204ENST00000532550 SLC9A2Q9UBY0 812 aa19.65■□□□□ 0.74
PHRF1-204ENST00000532550 COL6A3P12111 3177 aa19.65■□□□□ 0.74
PHRF1-204ENST00000532550 BAIAP3O94812 1187 aa19.64■□□□□ 0.73
PHRF1-204ENST00000532550 HOXC8P31273 242 aa19.64■□□□□ 0.73
PHRF1-204ENST00000532550 STK3Q13188 491 aa19.64■□□□□ 0.73
PHRF1-204ENST00000532550 GPNMBQ14956 572 aa19.64■□□□□ 0.73
PHRF1-204ENST00000532550 GRIN2CQ14957 1233 aa19.64■□□□□ 0.73
PHRF1-204ENST00000532550 PHOSPHO2Q8TCD6 241 aa19.64■□□□□ 0.73
PHRF1-204ENST00000532550 MYLIPQ8WY64 445 aa19.64■□□□□ 0.73
PHRF1-204ENST00000532550 WNT8BQ93098 351 aa19.64■□□□□ 0.73
PHRF1-204ENST00000532550 SLC28A3Q9HAS3 691 aa19.64■□□□□ 0.73
PHRF1-204ENST00000532550 ERAP1Q9NZ08 941 aa19.64■□□□□ 0.73
PHRF1-204ENST00000532550 NFASCO94856 1347 aa19.64■□□□□ 0.73
PHRF1-204ENST00000532550 TANC1Q9C0D5 1861 aa19.63■□□□□ 0.73
PHRF1-204ENST00000532550 NRCAMQ92823 1304 aa19.63■□□□□ 0.73
PHRF1-204ENST00000532550 RSPH10B2B2RC85 870 aa19.63■□□□□ 0.73
PHRF1-204ENST00000532550 NBNO60934 754 aa19.63■□□□□ 0.73
PHRF1-204ENST00000532550 CYP3A4P08684 503 aa19.63■□□□□ 0.73
PHRF1-204ENST00000532550 RSPH10BP0C881 870 aa19.63■□□□□ 0.73
PHRF1-204ENST00000532550 KCNJ6P48051 423 aa19.63■□□□□ 0.73
PHRF1-204ENST00000532550 RABGGTBP53611 331 aa19.63■□□□□ 0.73
PHRF1-204ENST00000532550 ANAPC15P60006 121 aa19.63■□□□□ 0.73
PHRF1-204ENST00000532550 CNKSR3Q6P9H4 555 aa19.63■□□□□ 0.73
PHRF1-204ENST00000532550 NIPA1Q7RTP0 329 aa19.63■□□□□ 0.73
PHRF1-204ENST00000532550 PLA2G4DQ86XP0 818 aa19.63■□□□□ 0.73
PHRF1-204ENST00000532550 SLC9A7Q96T83 725 aa19.63■□□□□ 0.73
PHRF1-204ENST00000532550 NKX2-4Q9H2Z4 354 aa19.63■□□□□ 0.73
PHRF1-204ENST00000532550 AZI2Q9H6S1 392 aa19.63■□□□□ 0.73
PHRF1-204ENST00000532550 AGO4Q9HCK5 861 aaKnown RBP19.63■□□□□ 0.73
PHRF1-204ENST00000532550 SH3GLB2Q9NR46 395 aa19.63■□□□□ 0.73
PHRF1-204ENST00000532550 PCDHA11Q9Y5I1 949 aa19.63■□□□□ 0.73
PHRF1-204ENST00000532550 KIF28PB7ZC32 967 aa19.62■□□□□ 0.73
PHRF1-204ENST00000532550 CXCL10P02778 98 aa19.62■□□□□ 0.73
PHRF1-204ENST00000532550 FOSL2P15408 326 aa19.62■□□□□ 0.73
PHRF1-204ENST00000532550 NLRP5P59047 1200 aa19.62■□□□□ 0.73
PHRF1-204ENST00000532550 TNPO1Q92973 898 aaKnown RBP19.62■□□□□ 0.73
PHRF1-204ENST00000532550 VPS54Q9P1Q0 977 aa19.62■□□□□ 0.73
PHRF1-204ENST00000532550 YBX2Q9Y2T7 364 aaKnown RBP19.62■□□□□ 0.73
PHRF1-204ENST00000532550 EMSYQ7Z589 1322 aa19.61■□□□□ 0.73
PHRF1-204ENST00000532550 FAM86B1E9PN63 330 aa19.61■□□□□ 0.73
PHRF1-204ENST00000532550 FAM86B2P0C5J1 330 aa19.61■□□□□ 0.73
PHRF1-204ENST00000532550 MARK3P27448 753 aa19.61■□□□□ 0.73
PHRF1-204ENST00000532550 IKBKEQ14164 716 aa19.61■□□□□ 0.73
PHRF1-204ENST00000532550 TRAF7Q6Q0C0 670 aa19.61■□□□□ 0.73
PHRF1-204ENST00000532550 LMBR1Q8WVP7 490 aa19.61■□□□□ 0.73
PHRF1-204ENST00000532550 ABHD14A-ACY1A0A1B0GW23 586 aa19.6■□□□□ 0.73
PHRF1-204ENST00000532550 ADAMTS3O15072 1205 aa19.6■□□□□ 0.73
PHRF1-204ENST00000532550 EFCAB14O75071 495 aa19.6■□□□□ 0.73
PHRF1-204ENST00000532550 CAND2O75155 1236 aa19.6■□□□□ 0.73
PHRF1-204ENST00000532550 LGR5O75473 907 aa19.6■□□□□ 0.73
PHRF1-204ENST00000532550 DEXIO95424 95 aa19.6■□□□□ 0.73
PHRF1-204ENST00000532550 MYOGP15173 224 aa19.6■□□□□ 0.73
PHRF1-204ENST00000532550 ACTR2P61160 394 aa19.6■□□□□ 0.73
PHRF1-204ENST00000532550 ADAM17P78536 824 aa19.6■□□□□ 0.73
PHRF1-204ENST00000532550 PPFIA1Q13136 1202 aa19.6■□□□□ 0.73
PHRF1-204ENST00000532550 ITGB3BPQ13352 177 aaPredicted RBP19.6■□□□□ 0.73
PHRF1-204ENST00000532550 RASGRP4Q8TDF6 673 aa19.6■□□□□ 0.73
PHRF1-204ENST00000532550 CRYGNQ8WXF5 182 aa19.6■□□□□ 0.73
PHRF1-204ENST00000532550 SLKQ9H2G2 1235 aaPredicted RBP19.6■□□□□ 0.73
PHRF1-204ENST00000532550 GBF1Q92538 1859 aa19.6■□□□□ 0.73
PHRF1-204ENST00000532550 DDX39AO00148 427 aaKnown RBP19.59■□□□□ 0.73
PHRF1-204ENST00000532550 STAT5BP51692 787 aa19.59■□□□□ 0.73
PHRF1-204ENST00000532550 MBTPS1Q14703 1052 aa19.59■□□□□ 0.73
PHRF1-204ENST00000532550 ANKRD1Q15327 319 aa19.59■□□□□ 0.73
PHRF1-204ENST00000532550 GRIK4Q16099 956 aa19.59■□□□□ 0.73
PHRF1-204ENST00000532550 PLPPR4Q7Z2D5 763 aa19.59■□□□□ 0.73
PHRF1-204ENST00000532550 HERC6Q8IVU3 1022 aa19.59■□□□□ 0.73
PHRF1-204ENST00000532550 MAFAQ8NHW3 353 aaPredicted RBP19.59■□□□□ 0.73
PHRF1-204ENST00000532550 GAS2L1Q99501 681 aaPredicted RBP19.59■□□□□ 0.73
PHRF1-204ENST00000532550 ZNF577Q9BSK1 485 aa19.59■□□□□ 0.73
PHRF1-204ENST00000532550 CDH23Q9H251 3354 aa19.59■□□□□ 0.73
PHRF1-204ENST00000532550 RRN3P2A6NIE6 340 aa19.58■□□□□ 0.72
PHRF1-204ENST00000532550 IPO5O00410 1097 aaKnown RBP19.58■□□□□ 0.72
PHRF1-204ENST00000532550 CDKL5O76039 1030 aa19.58■□□□□ 0.72
PHRF1-204ENST00000532550 ATG7O95352 703 aa19.58■□□□□ 0.72
PHRF1-204ENST00000532550 CTSHP09668 335 aa19.58■□□□□ 0.72
PHRF1-204ENST00000532550 WDR5P61964 334 aaKnown RBP19.58■□□□□ 0.72
PHRF1-204ENST00000532550 SETQ01105 290 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms