RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 DDX25Q9UHL0 483 aaKnown RBP9.07□□□□□ -0.96
TRIM49-202ENST00000532501 NRBP1Q9UHY1 535 aa9.07□□□□□ -0.96
TRIM49-202ENST00000532501 CLIC4Q9Y696 253 aa9.07□□□□□ -0.96
TRIM49-202ENST00000532501 EML1O00423 815 aa9.06□□□□□ -0.96
TRIM49-202ENST00000532501 CCNT1O60563 726 aaKnown RBP9.06□□□□□ -0.96
TRIM49-202ENST00000532501 AKR1A1P14550 325 aa9.06□□□□□ -0.96
TRIM49-202ENST00000532501 ZNF76P36508 570 aa9.06□□□□□ -0.96
TRIM49-202ENST00000532501 USP11P51784 963 aa9.06□□□□□ -0.96
TRIM49-202ENST00000532501 SPIRE1Q08AE8 756 aa9.06□□□□□ -0.96
TRIM49-202ENST00000532501 PTPAQ15257 358 aa9.06□□□□□ -0.96
TRIM49-202ENST00000532501 Q4G0T1 1027 aa9.06□□□□□ -0.96
TRIM49-202ENST00000532501 CELF3Q5SZQ8 465 aaKnown RBP9.06□□□□□ -0.96
TRIM49-202ENST00000532501 PPP4R3AQ6IN85 833 aa9.06□□□□□ -0.96
TRIM49-202ENST00000532501 CCSAPQ6IQ19 270 aaPredicted RBP9.06□□□□□ -0.96
TRIM49-202ENST00000532501 MOXD1Q6UVY6 613 aa9.06□□□□□ -0.96
TRIM49-202ENST00000532501 CYFIP1Q7L576 1253 aa9.06□□□□□ -0.96
TRIM49-202ENST00000532501 NIPA1Q7RTP0 329 aa9.06□□□□□ -0.96
TRIM49-202ENST00000532501 KLHDC9Q8NEP7 349 aa9.06□□□□□ -0.96
TRIM49-202ENST00000532501 U2AF1L4Q8WU68 220 aaKnown RBP9.06□□□□□ -0.96
TRIM49-202ENST00000532501 SLC5A5Q92911 643 aa9.06□□□□□ -0.96
TRIM49-202ENST00000532501 MTMR9Q96QG7 549 aa9.06□□□□□ -0.96
TRIM49-202ENST00000532501 UPF3AQ9H1J1 476 aaKnown RBP9.06□□□□□ -0.96
TRIM49-202ENST00000532501 UNC45AQ9H3U1 944 aa9.06□□□□□ -0.96
TRIM49-202ENST00000532501 EHMT1Q9H9B1 1298 aa9.06□□□□□ -0.96
TRIM49-202ENST00000532501 VAV3Q9UKW4 847 aa9.06□□□□□ -0.96
TRIM49-202ENST00000532501 FAM184BQ9ULE4 1060 aa9.06□□□□□ -0.96
TRIM49-202ENST00000532501 GSTTP1A0A1W2PQM5 241 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 IPO5O00410 1097 aaKnown RBP9.05□□□□□ -0.96
TRIM49-202ENST00000532501 PSMD10O75832 226 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 EN2P19622 333 aaPredicted RBP9.05□□□□□ -0.96
TRIM49-202ENST00000532501 SOX10P56693 466 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 GJA9P57773 515 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 CEBPZQ03701 1054 aaKnown RBP9.05□□□□□ -0.96
TRIM49-202ENST00000532501 DNM1Q05193 864 aaKnown RBP9.05□□□□□ -0.96
TRIM49-202ENST00000532501 GNL2Q13823 731 aaKnown RBP9.05□□□□□ -0.96
TRIM49-202ENST00000532501 TTLL4Q14679 1199 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 LRRC41Q15345 812 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 UGCGQ16739 394 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 MCTP2Q6DN12 878 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 IQSEC1Q6DN90 963 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 OR6J1Q8NGC5 347 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 CRISPLD2Q9H0B8 497 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 XPNPEP3Q9NQH7 507 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 TFIP11Q9UBB9 837 aaKnown RBP9.05□□□□□ -0.96
TRIM49-202ENST00000532501 VPS9D1Q9Y2B5 631 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 DOCK5Q9H7D0 1870 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 PP2D1A8MPX8 630 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 CHMP2AO43633 222 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 NEMFO60524 1076 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 DUSP11O75319 330 aaKnown RBP9.05□□□□□ -0.96
TRIM49-202ENST00000532501 STAM2O75886 525 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 GH1P01241 217 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 GJB1P08034 283 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 ZNF286BP0CG31 522 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 GCFC2P16383 781 aaKnown RBP9.05□□□□□ -0.96
TRIM49-202ENST00000532501 PTGDRQ13258 359 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 HIC1Q14526 733 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 SF3A1Q15459 793 aaKnown RBP9.05□□□□□ -0.96
TRIM49-202ENST00000532501 GNPTABQ3T906 1256 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 BRAPQ7Z569 592 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 NLRX1Q86UT6 975 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 LRRC15Q8TF66 581 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 KAT2BQ92831 832 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 WNT2BQ93097 391 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 GPR20Q99678 358 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 ZNF577Q9BSK1 485 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 GDPD2Q9HCC8 539 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 WRAP73Q9P2S5 460 aaPredicted RBP9.05□□□□□ -0.96
TRIM49-202ENST00000532501 OGDHLQ9ULD0 1010 aa9.05□□□□□ -0.96
TRIM49-202ENST00000532501 GRIN2DO15399 1336 aa9.04□□□□□ -0.96
TRIM49-202ENST00000532501 DNAH12Q6ZR08 3092 aa9.04□□□□□ -0.96
TRIM49-202ENST00000532501 A0A087WWV3 80 aa9.04□□□□□ -0.96
TRIM49-202ENST00000532501 ZNF862O60290 1169 aa9.04□□□□□ -0.96
TRIM49-202ENST00000532501 GFRA3O60609 400 aa9.04□□□□□ -0.96
TRIM49-202ENST00000532501 SGPL1O95470 568 aa9.04□□□□□ -0.96
TRIM49-202ENST00000532501 MMP3P08254 477 aa9.04□□□□□ -0.96
TRIM49-202ENST00000532501 OR52Z1P0C646 297 aa9.04□□□□□ -0.96
TRIM49-202ENST00000532501 C6orf222P0C671 652 aaPredicted RBP9.04□□□□□ -0.96
TRIM49-202ENST00000532501 RARBP10826 455 aa9.04□□□□□ -0.96
TRIM49-202ENST00000532501 HOXD8P13378 290 aaPredicted RBP9.04□□□□□ -0.96
TRIM49-202ENST00000532501 GJA8P48165 433 aa9.04□□□□□ -0.96
TRIM49-202ENST00000532501 TRAPPC10P48553 1259 aa9.04□□□□□ -0.96
TRIM49-202ENST00000532501 ACTR2P61160 394 aa9.04□□□□□ -0.96
TRIM49-202ENST00000532501 PSMC6P62333 389 aa9.04□□□□□ -0.96
TRIM49-202ENST00000532501 NKX3-2P78367 333 aa9.04□□□□□ -0.96
TRIM49-202ENST00000532501 ATP2C1P98194 919 aaPredicted RBP9.04□□□□□ -0.96
TRIM49-202ENST00000532501 SETQ01105 290 aaPredicted RBP9.04□□□□□ -0.96
TRIM49-202ENST00000532501 CALCRLQ16602 461 aa9.04□□□□□ -0.96
TRIM49-202ENST00000532501 LRCH2Q5VUJ6 765 aa9.04□□□□□ -0.96
TRIM49-202ENST00000532501 METTL7BQ6UX53 244 aa9.04□□□□□ -0.96
TRIM49-202ENST00000532501 CXCL17Q6UXB2 119 aa9.04□□□□□ -0.96
TRIM49-202ENST00000532501 USP49Q70CQ1 688 aa9.04□□□□□ -0.96
TRIM49-202ENST00000532501 UBE2Q1Q7Z7E8 422 aa9.04□□□□□ -0.96
TRIM49-202ENST00000532501 CCDC60Q8IWA6 550 aaPredicted RBP9.04□□□□□ -0.96
TRIM49-202ENST00000532501 DHX37Q8IY37 1157 aaKnown RBP9.04□□□□□ -0.96
TRIM49-202ENST00000532501 EMID1Q96A84 441 aaPredicted RBP9.04□□□□□ -0.96
TRIM49-202ENST00000532501 RNF25Q96BH1 459 aaPredicted RBP9.04□□□□□ -0.96
TRIM49-202ENST00000532501 ZBTB10Q96DT7 871 aa9.04□□□□□ -0.96
TRIM49-202ENST00000532501 SPATA33Q96N06 139 aa9.04□□□□□ -0.96
TRIM49-202ENST00000532501 SENP7Q9BQF6 1050 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms