RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 NOC4LQ9BVI4 516 aaKnown RBP15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 TUT1Q9H6E5 874 aaKnown RBP15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 JPH1Q9HDC5 661 aaPredicted RBP15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 PRDM5Q9NQX1 630 aaPredicted RBP15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 HDAC6Q9UBN7 1215 aa15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 SLC9A2Q9UBY0 812 aa15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 GTF2IRD1Q9UHL9 959 aa15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 TRIOBPQ9H2D6 2365 aa15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 TIMP1P01033 207 aa15.83■□□□□ 0.12
TSPAN4-220ENST00000532375 KRT2P35908 639 aa15.83■□□□□ 0.12
TSPAN4-220ENST00000532375 ACTR2P61160 394 aa15.83■□□□□ 0.12
TSPAN4-220ENST00000532375 SETQ01105 290 aaPredicted RBP15.83■□□□□ 0.12
TSPAN4-220ENST00000532375 B3GNT9Q6UX72 402 aa15.83■□□□□ 0.12
TSPAN4-220ENST00000532375 ABHD15Q6UXT9 468 aa15.83■□□□□ 0.12
TSPAN4-220ENST00000532375 PIK3AP1Q6ZUJ8 805 aa15.83■□□□□ 0.12
TSPAN4-220ENST00000532375 DIS3L2Q8IYB7 885 aaKnown RBP15.83■□□□□ 0.12
TSPAN4-220ENST00000532375 SLC5A5Q92911 643 aa15.83■□□□□ 0.12
TSPAN4-220ENST00000532375 RNPEPQ9H4A4 650 aa15.83■□□□□ 0.12
TSPAN4-220ENST00000532375 UMODL1Q5DID0 1318 aa15.83■□□□□ 0.12
TSPAN4-220ENST00000532375 KAT6AQ92794 2004 aa15.83■□□□□ 0.12
TSPAN4-220ENST00000532375 WNT7AO00755 349 aa15.82■□□□□ 0.12
TSPAN4-220ENST00000532375 TLR3O15455 904 aaKnown RBP15.82■□□□□ 0.12
TSPAN4-220ENST00000532375 CYP2C9P11712 490 aa15.82■□□□□ 0.12
TSPAN4-220ENST00000532375 FOSBP53539 338 aa15.82■□□□□ 0.12
TSPAN4-220ENST00000532375 EPHB4P54760 987 aa15.82■□□□□ 0.12
TSPAN4-220ENST00000532375 ADAM17P78536 824 aa15.82■□□□□ 0.12
TSPAN4-220ENST00000532375 ZNF200P98182 395 aaPredicted RBP15.82■□□□□ 0.12
TSPAN4-220ENST00000532375 GUCY1B3Q02153 619 aa15.82■□□□□ 0.12
TSPAN4-220ENST00000532375 CUL4AQ13619 759 aa15.82■□□□□ 0.12
TSPAN4-220ENST00000532375 FAM47CQ5HY64 1035 aa15.82■□□□□ 0.12
TSPAN4-220ENST00000532375 UTP14CQ5TAP6 766 aaKnown RBP15.82■□□□□ 0.12
TSPAN4-220ENST00000532375 PPP4R3AQ6IN85 833 aa15.82■□□□□ 0.12
TSPAN4-220ENST00000532375 ETNPPLQ8TBG4 499 aa15.82■□□□□ 0.12
TSPAN4-220ENST00000532375 DHX38Q92620 1227 aaKnown RBP15.82■□□□□ 0.12
TSPAN4-220ENST00000532375 GJA10Q969M2 543 aa15.82■□□□□ 0.12
TSPAN4-220ENST00000532375 SDF4Q9BRK5 362 aa15.82■□□□□ 0.12
TSPAN4-220ENST00000532375 ZNF577Q9BSK1 485 aa15.82■□□□□ 0.12
TSPAN4-220ENST00000532375 KATNAL1Q9BW62 490 aa15.82■□□□□ 0.12
TSPAN4-220ENST00000532375 TBC1D22BQ9NU19 505 aa15.82■□□□□ 0.12
TSPAN4-220ENST00000532375 PRKAG2Q9UGJ0 569 aa15.82■□□□□ 0.12
TSPAN4-220ENST00000532375 EMSYQ7Z589 1322 aa15.82■□□□□ 0.12
TSPAN4-220ENST00000532375 CCDC194A0A1B0GVG4 234 aa15.81■□□□□ 0.12
TSPAN4-220ENST00000532375 SLC37A4O43826 429 aa15.81■□□□□ 0.12
TSPAN4-220ENST00000532375 PSMD10O75832 226 aa15.81■□□□□ 0.12
TSPAN4-220ENST00000532375 RAG1P15918 1043 aa15.81■□□□□ 0.12
TSPAN4-220ENST00000532375 CYP2C18P33260 490 aa15.81■□□□□ 0.12
TSPAN4-220ENST00000532375 MFSD5Q6N075 450 aa15.81■□□□□ 0.12
TSPAN4-220ENST00000532375 C16orf59Q7L2K0 433 aa15.81■□□□□ 0.12
TSPAN4-220ENST00000532375 NEK8Q86SG6 692 aa15.81■□□□□ 0.12
TSPAN4-220ENST00000532375 WNT8BQ93098 351 aa15.81■□□□□ 0.12
TSPAN4-220ENST00000532375 C8orf76Q96K31 380 aa15.81■□□□□ 0.12
TSPAN4-220ENST00000532375 RIT2Q99578 217 aa15.81■□□□□ 0.12
TSPAN4-220ENST00000532375 WNT8AQ9H1J5 351 aa15.81■□□□□ 0.12
TSPAN4-220ENST00000532375 KCNMB3Q9NPA1 279 aa15.81■□□□□ 0.12
TSPAN4-220ENST00000532375 MYH9P35579 1960 aaKnown RBP15.8■□□□□ 0.12
TSPAN4-220ENST00000532375 DDX39AO00148 427 aaKnown RBP15.8■□□□□ 0.12
TSPAN4-220ENST00000532375 SUPT20HL2P0C7V6 817 aa15.8■□□□□ 0.12
TSPAN4-220ENST00000532375 SMIM10L2AP0DMW4 78 aa15.8■□□□□ 0.12
TSPAN4-220ENST00000532375 SMIM10L2BP0DMW5 78 aa15.8■□□□□ 0.12
TSPAN4-220ENST00000532375 ATP4AP20648 1035 aa15.8■□□□□ 0.12
TSPAN4-220ENST00000532375 CHMP4BP1P59074 171 aa15.8■□□□□ 0.12
TSPAN4-220ENST00000532375 PTGISQ16647 500 aa15.8■□□□□ 0.12
TSPAN4-220ENST00000532375 TRIM71Q2Q1W2 868 aaKnown RBP15.8■□□□□ 0.12
TSPAN4-220ENST00000532375 LETM2Q2VYF4 491 aa15.8■□□□□ 0.12
TSPAN4-220ENST00000532375 PLPPR4Q7Z2D5 763 aa15.8■□□□□ 0.12
TSPAN4-220ENST00000532375 C7orf31Q8N865 590 aa15.8■□□□□ 0.12
TSPAN4-220ENST00000532375 PPP1R12CQ9BZL4 782 aa15.8■□□□□ 0.12
TSPAN4-220ENST00000532375 SMARCAD1Q9H4L7 1026 aa15.8■□□□□ 0.12
TSPAN4-220ENST00000532375 TET1Q8NFU7 2136 aa15.8■□□□□ 0.12
TSPAN4-220ENST00000532375 SCN5AQ14524 2016 aa15.8■□□□□ 0.12
TSPAN4-220ENST00000532375 KIF28PB7ZC32 967 aa15.79■□□□□ 0.12
TSPAN4-220ENST00000532375 RBL2Q08999 1139 aa15.79■□□□□ 0.12
TSPAN4-220ENST00000532375 GPNMBQ14956 572 aa15.79■□□□□ 0.12
TSPAN4-220ENST00000532375 HABP4Q5JVS0 413 aaKnown RBP15.79■□□□□ 0.12
TSPAN4-220ENST00000532375 ZNF746Q6NUN9 644 aaPredicted RBP15.79■□□□□ 0.12
TSPAN4-220ENST00000532375 CCDC60Q8IWA6 550 aaPredicted RBP15.79■□□□□ 0.12
TSPAN4-220ENST00000532375 HAS1Q92839 578 aa15.79■□□□□ 0.12
TSPAN4-220ENST00000532375 LBHD1Q9BQE6 289 aaPredicted RBP15.79■□□□□ 0.12
TSPAN4-220ENST00000532375 HIPK3Q9H422 1215 aa15.79■□□□□ 0.12
TSPAN4-220ENST00000532375 SETD4Q9NVD3 440 aa15.79■□□□□ 0.12
TSPAN4-220ENST00000532375 DDX25Q9UHL0 483 aaKnown RBP15.79■□□□□ 0.12
TSPAN4-220ENST00000532375 A0A1W2PPC1 479 aa15.78■□□□□ 0.12
TSPAN4-220ENST00000532375 RBAK-RBAKDNI3L0D1 243 aa15.78■□□□□ 0.12
TSPAN4-220ENST00000532375 GCFC2P16383 781 aaKnown RBP15.78■□□□□ 0.12
TSPAN4-220ENST00000532375 U2AF2P26368 475 aaKnown RBP eCLIP15.78■□□□□ 0.12
TSPAN4-220ENST00000532375 TRIM29Q14134 588 aa15.78■□□□□ 0.12
TSPAN4-220ENST00000532375 PLCB4Q15147 1175 aa15.78■□□□□ 0.12
TSPAN4-220ENST00000532375 MARCH8Q5T0T0 291 aa15.78■□□□□ 0.12
TSPAN4-220ENST00000532375 TRAF7Q6Q0C0 670 aa15.78■□□□□ 0.12
TSPAN4-220ENST00000532375 SERINC5Q86VE9 423 aa15.78■□□□□ 0.12
TSPAN4-220ENST00000532375 FAM184AQ8NB25 1140 aa15.78■□□□□ 0.12
TSPAN4-220ENST00000532375 AFAP1L1Q8TED9 768 aa15.78■□□□□ 0.12
TSPAN4-220ENST00000532375 UBE2OQ9C0C9 1292 aaKnown RBP15.78■□□□□ 0.12
TSPAN4-220ENST00000532375 FOXP1Q9H334 677 aaPredicted RBP15.78■□□□□ 0.12
TSPAN4-220ENST00000532375 BRMS1Q9HCU9 246 aa15.78■□□□□ 0.12
TSPAN4-220ENST00000532375 ERAP1Q9NZ08 941 aa15.78■□□□□ 0.12
TSPAN4-220ENST00000532375 MAFBQ9Y5Q3 323 aaPredicted RBP15.78■□□□□ 0.12
TSPAN4-220ENST00000532375 PITPNM1O00562 1244 aa15.77■□□□□ 0.12
TSPAN4-220ENST00000532375 TREHO43280 583 aa15.77■□□□□ 0.12
TSPAN4-220ENST00000532375 CCNT1O60563 726 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms