RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 RBL2Q08999 1139 aa26.15■■□□□ 1.78
CAPN1-222ENST00000532285 RASIP1Q5U651 963 aa26.15■■□□□ 1.78
CAPN1-222ENST00000532285 GALNT17Q6IS24 598 aa26.15■■□□□ 1.78
CAPN1-222ENST00000532285 HERVK_113Q902F9 699 aa26.15■■□□□ 1.78
CAPN1-222ENST00000532285 DHX38Q92620 1227 aaKnown RBP26.15■■□□□ 1.78
CAPN1-222ENST00000532285 IGLV3-22A0A075B6J6 115 aa26.14■■□□□ 1.78
CAPN1-222ENST00000532285 GNAT1P11488 350 aa26.14■■□□□ 1.78
CAPN1-222ENST00000532285 HOXC8P31273 242 aa26.14■■□□□ 1.78
CAPN1-222ENST00000532285 HIC1Q14526 733 aa26.14■■□□□ 1.78
CAPN1-222ENST00000532285 FAM109BQ6ICB4 259 aaPredicted RBP26.14■■□□□ 1.78
CAPN1-222ENST00000532285 ATP6V0A1Q93050 837 aa26.14■■□□□ 1.78
CAPN1-222ENST00000532285 C22orf23Q9BZE7 217 aa26.14■■□□□ 1.78
CAPN1-222ENST00000532285 RNPEPQ9H4A4 650 aa26.14■■□□□ 1.78
CAPN1-222ENST00000532285 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.13■■□□□ 1.77
CAPN1-222ENST00000532285 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.13■■□□□ 1.77
CAPN1-222ENST00000532285 SELPP16109 830 aa26.13■■□□□ 1.77
CAPN1-222ENST00000532285 SETQ01105 290 aaPredicted RBP26.13■■□□□ 1.77
CAPN1-222ENST00000532285 ITGB3BPQ13352 177 aaPredicted RBP26.13■■□□□ 1.77
CAPN1-222ENST00000532285 ME3Q16798 604 aa26.13■■□□□ 1.77
CAPN1-222ENST00000532285 DEFB128Q7Z7B8 93 aa26.13■■□□□ 1.77
CAPN1-222ENST00000532285 SERINC5Q86VE9 423 aa26.13■■□□□ 1.77
CAPN1-222ENST00000532285 BLIDQ8IZY5 108 aa26.13■■□□□ 1.77
CAPN1-222ENST00000532285 DEFB123Q8N688 67 aa26.13■■□□□ 1.77
CAPN1-222ENST00000532285 DAGLBQ8NCG7 672 aa26.13■■□□□ 1.77
CAPN1-222ENST00000532285 VWCEQ96DN2 955 aa26.13■■□□□ 1.77
CAPN1-222ENST00000532285 AIFM3Q96NN9 605 aa26.13■■□□□ 1.77
CAPN1-222ENST00000532285 SMARCAD1Q9H4L7 1026 aa26.13■■□□□ 1.77
CAPN1-222ENST00000532285 ERAP1Q9NZ08 941 aa26.13■■□□□ 1.77
CAPN1-222ENST00000532285 PARNO95453 639 aaKnown RBP26.12■■□□□ 1.77
CAPN1-222ENST00000532285 CKBP12277 381 aa26.12■■□□□ 1.77
CAPN1-222ENST00000532285 XBP1P17861 261 aa26.12■■□□□ 1.77
CAPN1-222ENST00000532285 CIITAP33076 1130 aa26.12■■□□□ 1.77
CAPN1-222ENST00000532285 USP11P51784 963 aa26.12■■□□□ 1.77
CAPN1-222ENST00000532285 OTOP2Q7RTS6 562 aa26.12■■□□□ 1.77
CAPN1-222ENST00000532285 NECAB1Q8N987 351 aa26.12■■□□□ 1.77
CAPN1-222ENST00000532285 GLG1Q92896 1179 aa26.12■■□□□ 1.77
CAPN1-222ENST00000532285 GTF3C6Q969F1 213 aa26.12■■□□□ 1.77
CAPN1-222ENST00000532285 EMSYQ7Z589 1322 aa26.12■■□□□ 1.77
CAPN1-222ENST00000532285 TET1Q8NFU7 2136 aa26.11■■□□□ 1.77
CAPN1-222ENST00000532285 IPO5O00410 1097 aaKnown RBP26.11■■□□□ 1.77
CAPN1-222ENST00000532285 CTDNEP1O95476 244 aa26.11■■□□□ 1.77
CAPN1-222ENST00000532285 ACTR2P61160 394 aa26.11■■□□□ 1.77
CAPN1-222ENST00000532285 TRIM71Q2Q1W2 868 aaKnown RBP26.11■■□□□ 1.77
CAPN1-222ENST00000532285 LRRC8DQ7L1W4 858 aa26.11■■□□□ 1.77
CAPN1-222ENST00000532285 WASF1Q92558 559 aa26.11■■□□□ 1.77
CAPN1-222ENST00000532285 AZI2Q9H6S1 392 aa26.11■■□□□ 1.77
CAPN1-222ENST00000532285 SETD4Q9NVD3 440 aa26.11■■□□□ 1.77
CAPN1-222ENST00000532285 ORC3Q9UBD5 711 aaPredicted RBP26.11■■□□□ 1.77
CAPN1-222ENST00000532285 MYH9P35579 1960 aaKnown RBP26.1■■□□□ 1.77
CAPN1-222ENST00000532285 M0R2N6 131 aa26.1■■□□□ 1.77
CAPN1-222ENST00000532285 LGR5O75473 907 aa26.1■■□□□ 1.77
CAPN1-222ENST00000532285 LARGE1O95461 756 aa26.1■■□□□ 1.77
CAPN1-222ENST00000532285 ACTN1P12814 892 aa26.1■■□□□ 1.77
CAPN1-222ENST00000532285 ZNF577Q9BSK1 485 aa26.1■■□□□ 1.77
CAPN1-222ENST00000532285 PHF20Q9BVI0 1012 aa26.1■■□□□ 1.77
CAPN1-222ENST00000532285 TBC1D22BQ9NU19 505 aa26.1■■□□□ 1.77
CAPN1-222ENST00000532285 NRCAMQ92823 1304 aa26.1■■□□□ 1.77
CAPN1-222ENST00000532285 TREHO43280 583 aa26.09■■□□□ 1.77
CAPN1-222ENST00000532285 ATG7O95352 703 aa26.09■■□□□ 1.77
CAPN1-222ENST00000532285 NPY5RQ15761 445 aa26.09■■□□□ 1.77
CAPN1-222ENST00000532285 PRR16Q569H4 304 aa26.09■■□□□ 1.77
CAPN1-222ENST00000532285 Q7L0L9 218 aa26.09■■□□□ 1.77
CAPN1-222ENST00000532285 TBCKQ8TEA7 893 aa26.09■■□□□ 1.77
CAPN1-222ENST00000532285 WNT8BQ93098 351 aa26.09■■□□□ 1.77
CAPN1-222ENST00000532285 FTOQ9C0B1 505 aaKnown RBP eCLIP26.09■■□□□ 1.77
CAPN1-222ENST00000532285 CXXC1Q9P0U4 656 aaPredicted RBP26.09■■□□□ 1.77
CAPN1-222ENST00000532285 WDR81Q562E7 1941 aa26.09■■□□□ 1.77
CAPN1-222ENST00000532285 GBF1Q92538 1859 aa26.08■■□□□ 1.77
CAPN1-222ENST00000532285 DHX15O43143 795 aaKnown RBP26.08■■□□□ 1.77
CAPN1-222ENST00000532285 ADAM17P78536 824 aa26.08■■□□□ 1.77
CAPN1-222ENST00000532285 ZNF618Q5T7W0 954 aa26.08■■□□□ 1.77
CAPN1-222ENST00000532285 PLPPR4Q7Z2D5 763 aa26.08■■□□□ 1.77
CAPN1-222ENST00000532285 LMBR1Q8WVP7 490 aa26.08■■□□□ 1.77
CAPN1-222ENST00000532285 PCYT2Q99447 389 aa26.08■■□□□ 1.77
CAPN1-222ENST00000532285 KCNJ14Q9UNX9 436 aa26.08■■□□□ 1.77
CAPN1-222ENST00000532285 DDX39AO00148 427 aaKnown RBP26.07■■□□□ 1.76
CAPN1-222ENST00000532285 MARK3P27448 753 aa26.07■■□□□ 1.76
CAPN1-222ENST00000532285 THPOP40225 353 aa26.07■■□□□ 1.76
CAPN1-222ENST00000532285 ZNF697Q5TEC3 545 aa26.07■■□□□ 1.76
CAPN1-222ENST00000532285 TNPO1Q92973 898 aaKnown RBP26.07■■□□□ 1.76
CAPN1-222ENST00000532285 LIMCH1Q9UPQ0 1083 aa26.07■■□□□ 1.76
CAPN1-222ENST00000532285 SLC4A7Q9Y6M7 1214 aa26.07■■□□□ 1.76
CAPN1-222ENST00000532285 ZBBXA8MT70 800 aa26.06■■□□□ 1.76
CAPN1-222ENST00000532285 EDIL3O43854 480 aa26.06■■□□□ 1.76
CAPN1-222ENST00000532285 CAND2O75155 1236 aa26.06■■□□□ 1.76
CAPN1-222ENST00000532285 CCNE2O96020 404 aa26.06■■□□□ 1.76
CAPN1-222ENST00000532285 STAT5BP51692 787 aa26.06■■□□□ 1.76
CAPN1-222ENST00000532285 PPFIA1Q13136 1202 aa26.06■■□□□ 1.76
CAPN1-222ENST00000532285 NONOQ15233 471 aaKnown RBP eCLIP26.06■■□□□ 1.76
CAPN1-222ENST00000532285 ABHD15Q6UXT9 468 aa26.06■■□□□ 1.76
CAPN1-222ENST00000532285 KRT25Q7Z3Z0 450 aa26.06■■□□□ 1.76
CAPN1-222ENST00000532285 NSUN7Q8NE18 718 aaKnown RBP26.06■■□□□ 1.76
CAPN1-222ENST00000532285 LENG9Q96B70 501 aa26.06■■□□□ 1.76
CAPN1-222ENST00000532285 KIF2CQ99661 725 aa26.06■■□□□ 1.76
CAPN1-222ENST00000532285 MTMR10Q9NXD2 777 aa26.06■■□□□ 1.76
CAPN1-222ENST00000532285 IGKV6D-21A0A0A0MT36 114 aa26.05■■□□□ 1.76
CAPN1-222ENST00000532285 DTNBO60941 627 aa26.05■■□□□ 1.76
CAPN1-222ENST00000532285 FDPSP14324 419 aaKnown RBP26.05■■□□□ 1.76
CAPN1-222ENST00000532285 RBM25P49756 843 aaKnown RBP26.05■■□□□ 1.76
CAPN1-222ENST00000532285 SLC26A2P50443 739 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms