RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 TTLL4Q14679 1199 aa14.16□□□□□ -0.14
COPB1-208ENST00000532088 PRR16Q569H4 304 aa14.16□□□□□ -0.14
COPB1-208ENST00000532088 MAP3K21Q5TCX8 1036 aa14.16□□□□□ -0.14
COPB1-208ENST00000532088 IQSEC1Q6DN90 963 aa14.16□□□□□ -0.14
COPB1-208ENST00000532088 TAPT1Q6NXT6 567 aa14.16□□□□□ -0.14
COPB1-208ENST00000532088 FBXO46Q6PJ61 603 aaPredicted RBP14.16□□□□□ -0.14
COPB1-208ENST00000532088 PLA2G4DQ86XP0 818 aa14.16□□□□□ -0.14
COPB1-208ENST00000532088 SLFN12Q8IYM2 578 aa14.16□□□□□ -0.14
COPB1-208ENST00000532088 GIMAP8Q8ND71 665 aaPredicted RBP14.16□□□□□ -0.14
COPB1-208ENST00000532088 SCFD2Q8WU76 684 aa14.16□□□□□ -0.14
COPB1-208ENST00000532088 KCNMB3Q9NPA1 279 aa14.16□□□□□ -0.14
COPB1-208ENST00000532088 RTEL1Q9NZ71 1219 aa14.16□□□□□ -0.14
COPB1-208ENST00000532088 PCDHB6Q9Y5E3 794 aa14.16□□□□□ -0.14
COPB1-208ENST00000532088 PTCH2Q9Y6C5 1203 aa14.16□□□□□ -0.14
COPB1-208ENST00000532088 NFASCO94856 1347 aa14.15□□□□□ -0.14
COPB1-208ENST00000532088 KIAA1217Q5T5P2 1943 aa14.15□□□□□ -0.14
COPB1-208ENST00000532088 PCNTO95613 3336 aa14.15□□□□□ -0.14
COPB1-208ENST00000532088 SLC37A4O43826 429 aa14.15□□□□□ -0.14
COPB1-208ENST00000532088 BAG4O95429 457 aaKnown RBP14.15□□□□□ -0.14
COPB1-208ENST00000532088 YEATS4O95619 227 aa14.15□□□□□ -0.14
COPB1-208ENST00000532088 CYBAP13498 195 aa14.15□□□□□ -0.14
COPB1-208ENST00000532088 CD46P15529 392 aa14.15□□□□□ -0.14
COPB1-208ENST00000532088 MCM7P33993 719 aa14.15□□□□□ -0.14
COPB1-208ENST00000532088 KRT85P78386 507 aa14.15□□□□□ -0.14
COPB1-208ENST00000532088 ATP2C1P98194 919 aaPredicted RBP14.15□□□□□ -0.14
COPB1-208ENST00000532088 FOXD4L5Q5VV16 416 aaPredicted RBP14.15□□□□□ -0.14
COPB1-208ENST00000532088 ANO1Q5XXA6 986 aa14.15□□□□□ -0.14
COPB1-208ENST00000532088 ARL6IP4Q66PJ3 421 aaKnown RBP14.15□□□□□ -0.14
COPB1-208ENST00000532088 CLEC17AQ6ZS10 378 aa14.15□□□□□ -0.14
COPB1-208ENST00000532088 FBXO16Q8IX29 292 aaPredicted RBP14.15□□□□□ -0.14
COPB1-208ENST00000532088 ETNPPLQ8TBG4 499 aa14.15□□□□□ -0.14
COPB1-208ENST00000532088 FOXD4L4Q8WXT5 416 aaPredicted RBP14.15□□□□□ -0.14
COPB1-208ENST00000532088 MTMR9Q96QG7 549 aa14.15□□□□□ -0.14
COPB1-208ENST00000532088 RIT2Q99578 217 aa14.15□□□□□ -0.14
COPB1-208ENST00000532088 AGO4Q9HCK5 861 aaKnown RBP14.15□□□□□ -0.14
COPB1-208ENST00000532088 KCNH7Q9NS40 1196 aa14.15□□□□□ -0.14
COPB1-208ENST00000532088 TBC1D22BQ9NU19 505 aa14.15□□□□□ -0.14
COPB1-208ENST00000532088 Q9Y3F1 56 aa14.15□□□□□ -0.14
COPB1-208ENST00000532088 WNT7AO00755 349 aa14.14□□□□□ -0.15
COPB1-208ENST00000532088 MSH4O15457 936 aa14.14□□□□□ -0.15
COPB1-208ENST00000532088 CYP2C19P33261 490 aa14.14□□□□□ -0.15
COPB1-208ENST00000532088 SEMA3FQ13275 785 aa14.14□□□□□ -0.15
COPB1-208ENST00000532088 NEDD9Q14511 834 aa14.14□□□□□ -0.15
COPB1-208ENST00000532088 SF3A1Q15459 793 aaKnown RBP14.14□□□□□ -0.15
COPB1-208ENST00000532088 ZNF174Q15697 407 aa14.14□□□□□ -0.15
COPB1-208ENST00000532088 CALCRLQ16602 461 aa14.14□□□□□ -0.15
COPB1-208ENST00000532088 FAM173BQ6P4H8 233 aa14.14□□□□□ -0.15
COPB1-208ENST00000532088 CCDC62Q6P9F0 684 aa14.14□□□□□ -0.15
COPB1-208ENST00000532088 THSD4Q6ZMP0 1018 aa14.14□□□□□ -0.15
COPB1-208ENST00000532088 C4orf32Q8N8J7 132 aa14.14□□□□□ -0.15
COPB1-208ENST00000532088 CYP2W1Q8TAV3 490 aa14.14□□□□□ -0.15
COPB1-208ENST00000532088 SLC5A5Q92911 643 aa14.14□□□□□ -0.15
COPB1-208ENST00000532088 USP28Q96RU2 1077 aa14.14□□□□□ -0.15
COPB1-208ENST00000532088 WDR11Q9BZH6 1224 aa14.14□□□□□ -0.15
COPB1-208ENST00000532088 DDX41Q9UJV9 622 aaKnown RBP14.14□□□□□ -0.15
COPB1-208ENST00000532088 FAM184BQ9ULE4 1060 aa14.14□□□□□ -0.15
COPB1-208ENST00000532088 MRVI1Q9Y6F6 885 aa14.14□□□□□ -0.15
COPB1-208ENST00000532088 MCM3APO60318 1980 aa14.13□□□□□ -0.15
COPB1-208ENST00000532088 IPO5O00410 1097 aaKnown RBP14.13□□□□□ -0.15
COPB1-208ENST00000532088 SEPT4O43236 478 aa14.13□□□□□ -0.15
COPB1-208ENST00000532088 MSCO60682 206 aa14.13□□□□□ -0.15
COPB1-208ENST00000532088 PPP6R2O75170 966 aa14.13□□□□□ -0.15
COPB1-208ENST00000532088 OR52Z1P0C646 297 aa14.13□□□□□ -0.15
COPB1-208ENST00000532088 ARP10275 920 aa14.13□□□□□ -0.15
COPB1-208ENST00000532088 AKR1A1P14550 325 aa14.13□□□□□ -0.15
COPB1-208ENST00000532088 ELNP15502 786 aa14.13□□□□□ -0.15
COPB1-208ENST00000532088 KCNA2P16389 499 aa14.13□□□□□ -0.15
COPB1-208ENST00000532088 ATP2B1P20020 1258 aa14.13□□□□□ -0.15
COPB1-208ENST00000532088 DNM1Q05193 864 aaKnown RBP14.13□□□□□ -0.15
COPB1-208ENST00000532088 CACNB2Q08289 660 aaPredicted RBP14.13□□□□□ -0.15
COPB1-208ENST00000532088 SLC39A14Q15043 492 aa14.13□□□□□ -0.15
COPB1-208ENST00000532088 PTPAQ15257 358 aa14.13□□□□□ -0.15
COPB1-208ENST00000532088 DUSP28Q4G0W2 176 aa14.13□□□□□ -0.15
COPB1-208ENST00000532088 SEPT14Q6ZU15 432 aa14.13□□□□□ -0.15
COPB1-208ENST00000532088 LINC00301Q8NCQ3 95 aa14.13□□□□□ -0.15
COPB1-208ENST00000532088 KCNG4Q8TDN1 519 aa14.13□□□□□ -0.15
COPB1-208ENST00000532088 EMID1Q96A84 441 aaPredicted RBP14.13□□□□□ -0.15
COPB1-208ENST00000532088 KCTD12Q96CX2 325 aaKnown RBP14.13□□□□□ -0.15
COPB1-208ENST00000532088 ZNF577Q9BSK1 485 aa14.13□□□□□ -0.15
COPB1-208ENST00000532088 SCAND2PQ9GZW5 306 aaPredicted RBP14.13□□□□□ -0.15
COPB1-208ENST00000532088 ZHX1Q9UKY1 873 aaPredicted RBP14.13□□□□□ -0.15
COPB1-208ENST00000532088 INHAP05111 366 aa14.12□□□□□ -0.15
COPB1-208ENST00000532088 NKX3-2P78367 333 aa14.12□□□□□ -0.15
COPB1-208ENST00000532088 METTL7BQ6UX53 244 aa14.12□□□□□ -0.15
COPB1-208ENST00000532088 EEPD1Q7L9B9 569 aa14.12□□□□□ -0.15
COPB1-208ENST00000532088 HAS1Q92839 578 aa14.12□□□□□ -0.15
COPB1-208ENST00000532088 TNPO1Q92973 898 aaKnown RBP14.12□□□□□ -0.15
COPB1-208ENST00000532088 FERMT2Q96AC1 680 aa14.12□□□□□ -0.15
COPB1-208ENST00000532088 SDF4Q9BRK5 362 aa14.12□□□□□ -0.15
COPB1-208ENST00000532088 TMEM60Q9H2L4 133 aa14.12□□□□□ -0.15
COPB1-208ENST00000532088 RCOR1Q9UKL0 485 aa14.12□□□□□ -0.15
COPB1-208ENST00000532088 CLIC4Q9Y696 253 aa14.12□□□□□ -0.15
COPB1-208ENST00000532088 DHX15O43143 795 aaKnown RBP14.11□□□□□ -0.15
COPB1-208ENST00000532088 PSMD10O75832 226 aa14.11□□□□□ -0.15
COPB1-208ENST00000532088 TXNP10599 105 aaKnown RBP14.11□□□□□ -0.15
COPB1-208ENST00000532088 CAPN2P17655 700 aa14.11□□□□□ -0.15
COPB1-208ENST00000532088 UBA1P22314 1058 aaKnown RBP14.11□□□□□ -0.15
COPB1-208ENST00000532088 ADCYAP1R1P41586 468 aa14.11□□□□□ -0.15
COPB1-208ENST00000532088 KRT76Q01546 638 aa14.11□□□□□ -0.15
COPB1-208ENST00000532088 TNFAIP2Q03169 654 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms