RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 DEFB103AP81534 67 aa17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 MRPS9P82933 396 aaKnown RBP17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 ZNF200P98182 395 aaPredicted RBP17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 IKBKEQ14164 716 aa17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 NEDD9Q14511 834 aa17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 SKIV2LQ15477 1246 aaKnown RBP17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 XRRA1Q6P2D8 792 aa17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 TRAF7Q6Q0C0 670 aa17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 METTL7BQ6UX53 244 aa17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 NFXL1Q6ZNB6 911 aa17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 TMTC2Q8N394 836 aa17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 ADAMTS19Q8TE59 1207 aa17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 WNT8BQ93098 351 aa17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 MYL10Q9BUA6 226 aa17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 TUT1Q9H6E5 874 aaKnown RBP17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 NCOR1O75376 2440 aa17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 PRRC2BQ5JSZ5 2229 aaKnown RBP17.52■□□□□ 0.39
DEPDC7-204ENST00000532078 XIRP2A4UGR9 3374 aa17.51■□□□□ 0.39
DEPDC7-204ENST00000532078 CCDC69A6NI79 296 aa17.51■□□□□ 0.39
DEPDC7-204ENST00000532078 SPATA31C2B4DYI2 1134 aa17.51■□□□□ 0.39
DEPDC7-204ENST00000532078 HOXC8P31273 242 aa17.51■□□□□ 0.39
DEPDC7-204ENST00000532078 CAMK2BQ13554 666 aa17.51■□□□□ 0.39
DEPDC7-204ENST00000532078 MBTPS1Q14703 1052 aa17.51■□□□□ 0.39
DEPDC7-204ENST00000532078 AAK1Q2M2I8 961 aa17.51■□□□□ 0.39
DEPDC7-204ENST00000532078 PCNX4Q63HM2 1172 aa17.51■□□□□ 0.39
DEPDC7-204ENST00000532078 ATP6V0A1Q93050 837 aa17.51■□□□□ 0.39
DEPDC7-204ENST00000532078 TMEM87BQ96K49 555 aa17.51■□□□□ 0.39
DEPDC7-204ENST00000532078 HS3ST6Q96QI5 342 aa17.51■□□□□ 0.39
DEPDC7-204ENST00000532078 USP26Q9BXU7 913 aa17.51■□□□□ 0.39
DEPDC7-204ENST00000532078 RSPH10B2B2RC85 870 aa17.5■□□□□ 0.39
DEPDC7-204ENST00000532078 PIK3CDO00329 1044 aa17.5■□□□□ 0.39
DEPDC7-204ENST00000532078 SH2B2O14492 632 aaPredicted RBP17.5■□□□□ 0.39
DEPDC7-204ENST00000532078 LGR5O75473 907 aa17.5■□□□□ 0.39
DEPDC7-204ENST00000532078 GJB5O95377 273 aa17.5■□□□□ 0.39
DEPDC7-204ENST00000532078 RSPH10BP0C881 870 aa17.5■□□□□ 0.39
DEPDC7-204ENST00000532078 SMIM10L2AP0DMW4 78 aa17.5■□□□□ 0.39
DEPDC7-204ENST00000532078 SMIM10L2BP0DMW5 78 aa17.5■□□□□ 0.39
DEPDC7-204ENST00000532078 CALM1P0DP23 149 aa17.5■□□□□ 0.39
DEPDC7-204ENST00000532078 CALM2P0DP24 149 aa17.5■□□□□ 0.39
DEPDC7-204ENST00000532078 CALM3P0DP25 149 aa17.5■□□□□ 0.39
DEPDC7-204ENST00000532078 THPOP40225 353 aa17.5■□□□□ 0.39
DEPDC7-204ENST00000532078 HIC1Q14526 733 aa17.5■□□□□ 0.39
DEPDC7-204ENST00000532078 TCTN1Q2MV58 587 aa17.5■□□□□ 0.39
DEPDC7-204ENST00000532078 USP17L6PQ6QN14 398 aa17.5■□□□□ 0.39
DEPDC7-204ENST00000532078 CYFIP1Q7L576 1253 aa17.5■□□□□ 0.39
DEPDC7-204ENST00000532078 TMCO2Q7Z6W1 182 aaPredicted RBP17.5■□□□□ 0.39
DEPDC7-204ENST00000532078 UHRF1Q96T88 793 aaPredicted RBP17.5■□□□□ 0.39
DEPDC7-204ENST00000532078 RAD9AQ99638 391 aa17.5■□□□□ 0.39
DEPDC7-204ENST00000532078 LSG1Q9H089 658 aaKnown RBP17.5■□□□□ 0.39
DEPDC7-204ENST00000532078 ZNF215Q9UL58 517 aaPredicted RBP17.5■□□□□ 0.39
DEPDC7-204ENST00000532078 LCHNA4D1U4 455 aa17.49■□□□□ 0.39
DEPDC7-204ENST00000532078 CAND2O75155 1236 aa17.49■□□□□ 0.39
DEPDC7-204ENST00000532078 PLEKHA8P1O95397 391 aa17.49■□□□□ 0.39
DEPDC7-204ENST00000532078 GNAT1P11488 350 aa17.49■□□□□ 0.39
DEPDC7-204ENST00000532078 SEMA3FQ13275 785 aa17.49■□□□□ 0.39
DEPDC7-204ENST00000532078 GPR20Q99678 358 aa17.49■□□□□ 0.39
DEPDC7-204ENST00000532078 SENP7Q9BQF6 1050 aa17.49■□□□□ 0.39
DEPDC7-204ENST00000532078 ESYT1Q9BSJ8 1104 aa17.49■□□□□ 0.39
DEPDC7-204ENST00000532078 BCAS3Q9H6U6 928 aa17.49■□□□□ 0.39
DEPDC7-204ENST00000532078 RTEL1Q9NZ71 1219 aa17.49■□□□□ 0.39
DEPDC7-204ENST00000532078 DOCK5Q9H7D0 1870 aa17.49■□□□□ 0.39
DEPDC7-204ENST00000532078 MEIS2O14770 477 aa17.48■□□□□ 0.39
DEPDC7-204ENST00000532078 SLC27A2O14975 620 aa17.48■□□□□ 0.39
DEPDC7-204ENST00000532078 LIFRP42702 1097 aa17.48■□□□□ 0.39
DEPDC7-204ENST00000532078 GRB10Q13322 594 aa17.48■□□□□ 0.39
DEPDC7-204ENST00000532078 NLRX1Q86UT6 975 aa17.48■□□□□ 0.39
DEPDC7-204ENST00000532078 GIMAP8Q8ND71 665 aaPredicted RBP17.48■□□□□ 0.39
DEPDC7-204ENST00000532078 COG5Q9UP83 839 aa17.48■□□□□ 0.39
DEPDC7-204ENST00000532078 MICAL3Q7RTP6 2002 aa17.48■□□□□ 0.39
DEPDC7-204ENST00000532078 TREHO43280 583 aa17.47■□□□□ 0.39
DEPDC7-204ENST00000532078 AMHP03971 560 aa17.47■□□□□ 0.39
DEPDC7-204ENST00000532078 TFF2Q03403 129 aa17.47■□□□□ 0.39
DEPDC7-204ENST00000532078 CREB3L3Q68CJ9 461 aa17.47■□□□□ 0.39
DEPDC7-204ENST00000532078 KRT40Q6A162 431 aa17.47■□□□□ 0.39
DEPDC7-204ENST00000532078 SPRED2Q7Z698 418 aa17.47■□□□□ 0.39
DEPDC7-204ENST00000532078 TRIM50Q86XT4 487 aa17.47■□□□□ 0.39
DEPDC7-204ENST00000532078 SRBD1Q8N5C6 995 aaKnown RBP17.47■□□□□ 0.39
DEPDC7-204ENST00000532078 CDHR1Q96JP9 859 aa17.47■□□□□ 0.39
DEPDC7-204ENST00000532078 TGS1Q96RS0 853 aaKnown RBP17.47■□□□□ 0.39
DEPDC7-204ENST00000532078 RNPEPQ9H4A4 650 aa17.47■□□□□ 0.39
DEPDC7-204ENST00000532078 PSTPIP2Q9H939 334 aa17.47■□□□□ 0.39
DEPDC7-204ENST00000532078 ANO2Q9NQ90 1003 aa17.47■□□□□ 0.39
DEPDC7-204ENST00000532078 SLC12A7Q9Y666 1083 aa17.47■□□□□ 0.39
DEPDC7-204ENST00000532078 SIP14410 1827 aa17.47■□□□□ 0.39
DEPDC7-204ENST00000532078 LINC01553A4QN01 128 aa17.46■□□□□ 0.39
DEPDC7-204ENST00000532078 LPXNO60711 386 aa17.46■□□□□ 0.39
DEPDC7-204ENST00000532078 RXRAP19793 462 aa17.46■□□□□ 0.39
DEPDC7-204ENST00000532078 SP4Q02446 784 aa17.46■□□□□ 0.39
DEPDC7-204ENST00000532078 PLEKHG4Q58EX7 1191 aa17.46■□□□□ 0.39
DEPDC7-204ENST00000532078 VARS2Q5ST30 1063 aaKnown RBP17.46■□□□□ 0.39
DEPDC7-204ENST00000532078 UTP14CQ5TAP6 766 aaKnown RBP17.46■□□□□ 0.39
DEPDC7-204ENST00000532078 FAM117BQ6P1L5 589 aa17.46■□□□□ 0.39
DEPDC7-204ENST00000532078 DBF4BQ8NFT6 615 aa17.46■□□□□ 0.39
DEPDC7-204ENST00000532078 GDPD5Q8WTR4 605 aa17.46■□□□□ 0.39
DEPDC7-204ENST00000532078 SEPT8Q92599 483 aa17.46■□□□□ 0.39
DEPDC7-204ENST00000532078 GPRASP2Q96D09 838 aa17.46■□□□□ 0.39
DEPDC7-204ENST00000532078 LMCD1Q9NZU5 365 aa17.46■□□□□ 0.39
DEPDC7-204ENST00000532078 INSL6Q9Y581 213 aa17.46■□□□□ 0.39
DEPDC7-204ENST00000532078 CTSHP09668 335 aa17.45■□□□□ 0.38
DEPDC7-204ENST00000532078 ERVK-21P61565 698 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms