RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 VWA5B2Q8N398 1253 aa5.93□□□□□ -1.46
ECHDC1-222ENST00000531967 ZMIZ2Q8NF64 920 aa5.93□□□□□ -1.46
ECHDC1-222ENST00000531967 PTPRN2Q92932 1015 aa5.93□□□□□ -1.46
ECHDC1-222ENST00000531967 ATG4CQ96DT6 458 aa5.93□□□□□ -1.46
ECHDC1-222ENST00000531967 GMCL1Q96IK5 515 aa5.93□□□□□ -1.46
ECHDC1-222ENST00000531967 HAUS7Q99871 368 aa5.93□□□□□ -1.46
ECHDC1-222ENST00000531967 FHDC1Q9C0D6 1143 aaPredicted RBP5.93□□□□□ -1.46
ECHDC1-222ENST00000531967 PRDM5Q9NQX1 630 aaPredicted RBP5.93□□□□□ -1.46
ECHDC1-222ENST00000531967 SUSD2Q9UGT4 822 aa5.93□□□□□ -1.46
ECHDC1-222ENST00000531967 CYP8B1Q9UNU6 501 aa5.93□□□□□ -1.46
ECHDC1-222ENST00000531967 RHPN2P1A8MT19 583 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 IRAK2O43187 625 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 XYLBO75191 536 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 TPPPO94811 219 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 TGDSO95455 350 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 STARD3NLO95772 234 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 ATP4AP20648 1035 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 KCNJ6P48051 423 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 KRT32Q14532 448 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 HSF5Q4G112 596 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 SETMARQ53H47 684 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 ABHD17CQ6PCB6 329 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 CNSTQ6PJW8 725 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 CCBE1Q6UXH8 406 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 NLRC3Q7RTR2 1065 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 SIMC1Q8NDZ2 872 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 SPATA18Q8TC71 538 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 PPP1R14AQ96A00 147 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 TMEM169Q96HH4 297 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 HSH2DQ96JZ2 352 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 MAGEH1Q9H213 219 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 TRMT1Q9NXH9 659 aaKnown RBP5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 ZSWIM5Q9P217 1185 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 DENND2AQ9ULE3 1009 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 USP19O94966 1318 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 ANKRD34BA5PLL1 514 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 H3BML4 177 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 ACTN2P35609 894 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 PHKA1P46020 1223 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 RGS3P49796 1198 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 RCAN1P53805 252 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 CACNB3P54284 484 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 SCAND1P57086 179 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 PPP2R3AQ06190 1150 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 GALNT1Q10472 559 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 STARD3Q14849 445 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 GGT6Q6P531 493 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 KRT74Q7RTS7 529 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 DNAJB7Q7Z6W7 309 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 DENND1CQ8IV53 801 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 MIER2Q8N344 545 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 FNIP1Q8TF40 1166 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 CHTF18Q8WVB6 975 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 MOGAT1Q96PD6 335 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 GHITMQ9H3K2 345 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 JMJD4Q9H9V9 463 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 GMIPQ9P107 970 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 TBC1D29Q9UFV1 150 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 CORO2BQ9UQ03 480 aa5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 MTF2Q9Y483 593 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-222ENST00000531967 TNFRSF10CO14798 259 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 HOXC11O43248 304 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 TBX1O43435 398 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 CRTAMO95727 393 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 P4HA1P13674 534 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 IL4RP24394 825 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 CD151P48509 253 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 PLCL1Q15111 1095 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 DOK7Q18PE1 504 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 SPRED3Q2MJR0 410 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 DDX53Q86TM3 631 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 GSDMBQ8TAX9 411 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 GIMAP1Q8WWP7 306 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 ERCC4Q92889 916 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 RBM18Q96H35 190 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 TIGD1Q96MW7 591 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 UROC1Q96N76 676 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 CNTNAP3BQ96NU0 1288 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 CNTNAP3Q9BZ76 1288 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 RAI14Q9P0K7 980 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 C19orf53Q9UNZ5 99 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 SAMM50Q9Y512 469 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 PRR36Q9H6K5 1346 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 PLOD2O00469 737 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 B3GALT2O43825 422 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 URI1O94763 535 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 UBXN7O94888 489 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 CCDC175P0C221 793 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 THEGLP0DJG4 465 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 RAG1P15918 1043 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 GRNP28799 593 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 ADD1P35611 737 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 NOP2P46087 812 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 LIMK1P53667 647 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 CSE1LP55060 971 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 EVCP57679 992 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 OCRLQ01968 901 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 HAUS3Q68CZ6 603 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 IRGCQ6NXR0 463 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 TXNDC11Q6PKC3 985 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms