RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 NOC4LQ9BVI4 516 aaKnown RBP12.3□□□□□ -0.44
GPATCH4-216ENST00000531900 PPP1R12CQ9BZL4 782 aa12.3□□□□□ -0.44
GPATCH4-216ENST00000531900 JPH1Q9HDC5 661 aaPredicted RBP12.3□□□□□ -0.44
GPATCH4-216ENST00000531900 TBC1D22BQ9NU19 505 aa12.3□□□□□ -0.44
GPATCH4-216ENST00000531900 TRMT13Q9NUP7 481 aaKnown RBP12.3□□□□□ -0.44
GPATCH4-216ENST00000531900 MYH9P35579 1960 aaKnown RBP12.29□□□□□ -0.44
GPATCH4-216ENST00000531900 TMEM265A0A087WTH1 108 aa12.29□□□□□ -0.44
GPATCH4-216ENST00000531900 IGKV6D-21A0A0A0MT36 114 aa12.29□□□□□ -0.44
GPATCH4-216ENST00000531900 ST18O60284 1047 aa12.29□□□□□ -0.44
GPATCH4-216ENST00000531900 ZNF76P36508 570 aa12.29□□□□□ -0.44
GPATCH4-216ENST00000531900 MCM2P49736 904 aa12.29□□□□□ -0.44
GPATCH4-216ENST00000531900 Q4G0T1 1027 aa12.29□□□□□ -0.44
GPATCH4-216ENST00000531900 PSRC1Q6PGN9 363 aaPredicted RBP12.29□□□□□ -0.44
GPATCH4-216ENST00000531900 PLA2G4DQ86XP0 818 aa12.29□□□□□ -0.44
GPATCH4-216ENST00000531900 TBCKQ8TEA7 893 aa12.29□□□□□ -0.44
GPATCH4-216ENST00000531900 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.29□□□□□ -0.44
GPATCH4-216ENST00000531900 ALG1Q9BT22 464 aa12.29□□□□□ -0.44
GPATCH4-216ENST00000531900 SEMA6BQ9H3T3 888 aa12.29□□□□□ -0.44
GPATCH4-216ENST00000531900 HIPK3Q9H422 1215 aa12.29□□□□□ -0.44
GPATCH4-216ENST00000531900 HDAC6Q9UBN7 1215 aa12.29□□□□□ -0.44
GPATCH4-216ENST00000531900 SLC9A2Q9UBY0 812 aa12.29□□□□□ -0.44
GPATCH4-216ENST00000531900 KCNJ14Q9UNX9 436 aa12.29□□□□□ -0.44
GPATCH4-216ENST00000531900 TELO2Q9Y4R8 837 aa12.29□□□□□ -0.44
GPATCH4-216ENST00000531900 EMSYQ7Z589 1322 aa12.29□□□□□ -0.44
GPATCH4-216ENST00000531900 COL6A3P12111 3177 aa12.28□□□□□ -0.44
GPATCH4-216ENST00000531900 IPO5O00410 1097 aaKnown RBP12.28□□□□□ -0.44
GPATCH4-216ENST00000531900 JAK2O60674 1132 aa12.28□□□□□ -0.44
GPATCH4-216ENST00000531900 ZNF286BP0CG31 522 aa12.28□□□□□ -0.44
GPATCH4-216ENST00000531900 CSF2RAP15509 400 aa12.28□□□□□ -0.44
GPATCH4-216ENST00000531900 CYP2C18P33260 490 aa12.28□□□□□ -0.44
GPATCH4-216ENST00000531900 TCF7P36402 384 aaPredicted RBP12.28□□□□□ -0.44
GPATCH4-216ENST00000531900 ADAM17P78536 824 aa12.28□□□□□ -0.44
GPATCH4-216ENST00000531900 HMGN5P82970 282 aaKnown RBP12.28□□□□□ -0.44
GPATCH4-216ENST00000531900 TMEM240Q5SV17 173 aa12.28□□□□□ -0.44
GPATCH4-216ENST00000531900 PPP4R3AQ6IN85 833 aa12.28□□□□□ -0.44
GPATCH4-216ENST00000531900 GDF6Q6KF10 455 aaPredicted RBP12.28□□□□□ -0.44
GPATCH4-216ENST00000531900 PLPPR4Q7Z2D5 763 aa12.28□□□□□ -0.44
GPATCH4-216ENST00000531900 C7orf31Q8N865 590 aa12.28□□□□□ -0.44
GPATCH4-216ENST00000531900 CAGE1Q8TC20 777 aa12.28□□□□□ -0.44
GPATCH4-216ENST00000531900 TNFRSF25Q93038 417 aa12.28□□□□□ -0.44
GPATCH4-216ENST00000531900 GUCD1Q96NT3 240 aa12.28□□□□□ -0.44
GPATCH4-216ENST00000531900 RIT2Q99578 217 aa12.28□□□□□ -0.44
GPATCH4-216ENST00000531900 SDF4Q9BRK5 362 aa12.28□□□□□ -0.44
GPATCH4-216ENST00000531900 MTIF3Q9H2K0 278 aaKnown RBP12.28□□□□□ -0.44
GPATCH4-216ENST00000531900 ZNF215Q9UL58 517 aaPredicted RBP12.28□□□□□ -0.44
GPATCH4-216ENST00000531900 TET1Q8NFU7 2136 aa12.28□□□□□ -0.44
GPATCH4-216ENST00000531900 MMP1P03956 469 aa12.27□□□□□ -0.45
GPATCH4-216ENST00000531900 SLC26A2P50443 739 aa12.27□□□□□ -0.45
GPATCH4-216ENST00000531900 ACTR2P61160 394 aa12.27□□□□□ -0.45
GPATCH4-216ENST00000531900 BFSP2Q13515 415 aa12.27□□□□□ -0.45
GPATCH4-216ENST00000531900 NONOQ15233 471 aaKnown RBP eCLIP12.27□□□□□ -0.45
GPATCH4-216ENST00000531900 PTGISQ16647 500 aa12.27□□□□□ -0.45
GPATCH4-216ENST00000531900 ZNF746Q6NUN9 644 aaPredicted RBP12.27□□□□□ -0.45
GPATCH4-216ENST00000531900 B3GNT9Q6UX72 402 aa12.27□□□□□ -0.45
GPATCH4-216ENST00000531900 ABHD15Q6UXT9 468 aa12.27□□□□□ -0.45
GPATCH4-216ENST00000531900 RPUSD2Q8IZ73 545 aaKnown RBP12.27□□□□□ -0.45
GPATCH4-216ENST00000531900 AFAP1L1Q8TED9 768 aa12.27□□□□□ -0.45
GPATCH4-216ENST00000531900 SLC5A5Q92911 643 aa12.27□□□□□ -0.45
GPATCH4-216ENST00000531900 PCYT2Q99447 389 aa12.27□□□□□ -0.45
GPATCH4-216ENST00000531900 CDX2Q99626 313 aaPredicted RBP12.27□□□□□ -0.45
GPATCH4-216ENST00000531900 WNT8AQ9H1J5 351 aa12.27□□□□□ -0.45
GPATCH4-216ENST00000531900 RNPEPQ9H4A4 650 aa12.27□□□□□ -0.45
GPATCH4-216ENST00000531900 SMARCAD1Q9H4L7 1026 aa12.27□□□□□ -0.45
GPATCH4-216ENST00000531900 IL23AQ9NPF7 189 aa12.27□□□□□ -0.45
GPATCH4-216ENST00000531900 GJB4Q9NTQ9 266 aa12.27□□□□□ -0.45
GPATCH4-216ENST00000531900 ERAP1Q9NZ08 941 aa12.27□□□□□ -0.45
GPATCH4-216ENST00000531900 CHD9Q3L8U1 2897 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 TANC1Q9C0D5 1861 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 MSH4O15457 936 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 SORBS3O60504 671 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 PARNO95453 639 aaKnown RBP12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 CCNE2O96020 404 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 FGBP02675 491 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 ACRP10323 421 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 CYP2C9P11712 490 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 GCFC2P16383 781 aaKnown RBP12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 RFC2P35250 354 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 PTK7Q13308 1070 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 HIC1Q14526 733 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 TRIM71Q2Q1W2 868 aaKnown RBP12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 PRR16Q569H4 304 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 FAM47CQ5HY64 1035 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 RASIP1Q5U651 963 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 ZNF365Q70YC5 407 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 C16orf59Q7L2K0 433 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 RPAINQ86UA6 219 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 SERINC5Q86VE9 423 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 CCDC83Q8IWF9 413 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 SMAP1Q8IYB5 467 aaPredicted RBP12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 FBXO18Q8NFZ0 1043 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 OXER1Q8TDS5 423 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 VWCEQ96DN2 955 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 NAP1L4Q99733 375 aaKnown RBP12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 ZNF577Q9BSK1 485 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 NRCAMQ92823 1304 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 CDH23Q9H251 3354 aa12.26□□□□□ -0.45
GPATCH4-216ENST00000531900 CCDC194A0A1B0GVG4 234 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 TBX3O15119 743 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 CAND2O75155 1236 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 PSMD10O75832 226 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms