RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 TGS1Q96RS0 853 aaKnown RBP15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 EHMT1Q9H9B1 1298 aa15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 CERS4Q9HA82 394 aa15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 JADE2Q9NQC1 790 aa15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 SETD4Q9NVD3 440 aa15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 PCDHA6Q9UN73 950 aa15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 PCDHA8Q9Y5H6 950 aa15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 PRRC2BQ5JSZ5 2229 aaKnown RBP15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 MYH7BA7E2Y1 1941 aa15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 MBLAC1A4D2B0 266 aaPredicted RBP15.28■□□□□ 0.04
AMBRA1-210ENST00000531542 LINC01553A4QN01 128 aa15.28■□□□□ 0.04
AMBRA1-210ENST00000531542 FOSP01100 380 aaPredicted RBP15.28■□□□□ 0.04
AMBRA1-210ENST00000531542 HMGB1P09429 215 aaKnown RBP15.28■□□□□ 0.04
AMBRA1-210ENST00000531542 MTMR1Q13613 665 aa15.28■□□□□ 0.04
AMBRA1-210ENST00000531542 KRT32Q14532 448 aa15.28■□□□□ 0.04
AMBRA1-210ENST00000531542 TMCO2Q7Z6W1 182 aaPredicted RBP15.28■□□□□ 0.04
AMBRA1-210ENST00000531542 MICU3Q86XE3 530 aa15.28■□□□□ 0.04
AMBRA1-210ENST00000531542 TRIM50Q86XT4 487 aa15.28■□□□□ 0.04
AMBRA1-210ENST00000531542 LMBR1Q8WVP7 490 aa15.28■□□□□ 0.04
AMBRA1-210ENST00000531542 TOP1MTQ969P6 601 aa15.28■□□□□ 0.04
AMBRA1-210ENST00000531542 GLT8D2Q9H1C3 349 aa15.28■□□□□ 0.04
AMBRA1-210ENST00000531542 SUGCTQ9HAC7 445 aa15.28■□□□□ 0.04
AMBRA1-210ENST00000531542 RIC8AQ9NPQ8 531 aa15.28■□□□□ 0.04
AMBRA1-210ENST00000531542 ERAP1Q9NZ08 941 aa15.28■□□□□ 0.04
AMBRA1-210ENST00000531542 GSTTP1A0A1W2PQM5 241 aa15.27■□□□□ 0.04
AMBRA1-210ENST00000531542 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.27■□□□□ 0.04
AMBRA1-210ENST00000531542 FAM43BQ6ZT52 329 aaPredicted RBP15.27■□□□□ 0.04
AMBRA1-210ENST00000531542 HEATR3Q7Z4Q2 680 aa15.27■□□□□ 0.04
AMBRA1-210ENST00000531542 MICALL1Q8N3F8 863 aa15.27■□□□□ 0.04
AMBRA1-210ENST00000531542 IL27Q8NEV9 243 aa15.27■□□□□ 0.04
AMBRA1-210ENST00000531542 SAMD11Q96NU1 681 aa15.27■□□□□ 0.04
AMBRA1-210ENST00000531542 UHRF1Q96T88 793 aaPredicted RBP15.27■□□□□ 0.04
AMBRA1-210ENST00000531542 LRRC2Q9BYS8 371 aa15.27■□□□□ 0.04
AMBRA1-210ENST00000531542 SMARCAD1Q9H4L7 1026 aa15.27■□□□□ 0.04
AMBRA1-210ENST00000531542 TELO2Q9Y4R8 837 aa15.27■□□□□ 0.04
AMBRA1-210ENST00000531542 NFASCO94856 1347 aa15.26■□□□□ 0.03
AMBRA1-210ENST00000531542 CNTNAP5Q8WYK1 1306 aa15.26■□□□□ 0.03
AMBRA1-210ENST00000531542 ZBTB43O43298 467 aa15.26■□□□□ 0.03
AMBRA1-210ENST00000531542 ARHGAP4P98171 946 aa15.26■□□□□ 0.03
AMBRA1-210ENST00000531542 UBE2SQ16763 222 aa15.26■□□□□ 0.03
AMBRA1-210ENST00000531542 UTP14CQ5TAP6 766 aaKnown RBP15.26■□□□□ 0.03
AMBRA1-210ENST00000531542 WWC2Q6AWC2 1192 aa15.26■□□□□ 0.03
AMBRA1-210ENST00000531542 SPRED2Q7Z698 418 aa15.26■□□□□ 0.03
AMBRA1-210ENST00000531542 CCDC82Q8N4S0 544 aa15.26■□□□□ 0.03
AMBRA1-210ENST00000531542 KCNB2Q92953 911 aa15.26■□□□□ 0.03
AMBRA1-210ENST00000531542 TNPO1Q92973 898 aaKnown RBP15.26■□□□□ 0.03
AMBRA1-210ENST00000531542 HLA-CQ95604 372 aa15.26■□□□□ 0.03
AMBRA1-210ENST00000531542 MXRA8Q9BRK3 442 aa15.26■□□□□ 0.03
AMBRA1-210ENST00000531542 KCNH7Q9NS40 1196 aa15.26■□□□□ 0.03
AMBRA1-210ENST00000531542 BRPF3Q9ULD4 1205 aa15.26■□□□□ 0.03
AMBRA1-210ENST00000531542 XIRP2A4UGR9 3374 aa15.25■□□□□ 0.03
AMBRA1-210ENST00000531542 COL4A6Q14031 1691 aa15.25■□□□□ 0.03
AMBRA1-210ENST00000531542 hCG_1642624A0A1W2PR95 340 aa15.25■□□□□ 0.03
AMBRA1-210ENST00000531542 RRN3P2A6NIE6 340 aa15.25■□□□□ 0.03
AMBRA1-210ENST00000531542 CDC45O75419 566 aa15.25■□□□□ 0.03
AMBRA1-210ENST00000531542 CHRNA1P02708 482 aa15.25■□□□□ 0.03
AMBRA1-210ENST00000531542 TFF2Q03403 129 aa15.25■□□□□ 0.03
AMBRA1-210ENST00000531542 PPFIA1Q13136 1202 aa15.25■□□□□ 0.03
AMBRA1-210ENST00000531542 AP3B2Q13367 1082 aa15.25■□□□□ 0.03
AMBRA1-210ENST00000531542 SKIV2LQ15477 1246 aaKnown RBP15.25■□□□□ 0.03
AMBRA1-210ENST00000531542 RTN1Q16799 776 aa15.25■□□□□ 0.03
AMBRA1-210ENST00000531542 KRT40Q6A162 431 aa15.25■□□□□ 0.03
AMBRA1-210ENST00000531542 RSPH3Q86UC2 560 aa15.25■□□□□ 0.03
AMBRA1-210ENST00000531542 RASEFQ8IZ41 740 aa15.25■□□□□ 0.03
AMBRA1-210ENST00000531542 MYOCDQ8IZQ8 938 aa15.25■□□□□ 0.03
AMBRA1-210ENST00000531542 FBXL16Q8N461 479 aa15.25■□□□□ 0.03
AMBRA1-210ENST00000531542 IFIH1Q9BYX4 1025 aaKnown RBP15.25■□□□□ 0.03
AMBRA1-210ENST00000531542 JPH1Q9HDC5 661 aaPredicted RBP15.25■□□□□ 0.03
AMBRA1-210ENST00000531542 BARHL2Q9NY43 387 aa15.25■□□□□ 0.03
AMBRA1-210ENST00000531542 PTPRSQ13332 1948 aa15.24■□□□□ 0.03
AMBRA1-210ENST00000531542 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.24■□□□□ 0.03
AMBRA1-210ENST00000531542 CTSHP09668 335 aa15.24■□□□□ 0.03
AMBRA1-210ENST00000531542 CLK2P49760 499 aaKnown RBP15.24■□□□□ 0.03
AMBRA1-210ENST00000531542 NAPAP54920 295 aa15.24■□□□□ 0.03
AMBRA1-210ENST00000531542 SP4Q02446 784 aa15.24■□□□□ 0.03
AMBRA1-210ENST00000531542 MGAT3Q09327 533 aa15.24■□□□□ 0.03
AMBRA1-210ENST00000531542 ADCK5Q3MIX3 580 aa15.24■□□□□ 0.03
AMBRA1-210ENST00000531542 CEP55Q53EZ4 464 aa15.24■□□□□ 0.03
AMBRA1-210ENST00000531542 MARCH8Q5T0T0 291 aa15.24■□□□□ 0.03
AMBRA1-210ENST00000531542 MCTP2Q6DN12 878 aa15.24■□□□□ 0.03
AMBRA1-210ENST00000531542 TYW1BQ6NUM6 668 aa15.24■□□□□ 0.03
AMBRA1-210ENST00000531542 NIPA1Q7RTP0 329 aa15.24■□□□□ 0.03
AMBRA1-210ENST00000531542 PLPPR4Q7Z2D5 763 aa15.24■□□□□ 0.03
AMBRA1-210ENST00000531542 RAB11FIP4Q86YS3 637 aa15.24■□□□□ 0.03
AMBRA1-210ENST00000531542 GLG1Q92896 1179 aa15.24■□□□□ 0.03
AMBRA1-210ENST00000531542 OSBPL7Q9BZF2 842 aa15.24■□□□□ 0.03
AMBRA1-210ENST00000531542 FAM217BQ9NTX9 383 aaPredicted RBP15.24■□□□□ 0.03
AMBRA1-210ENST00000531542 SLC9A2Q9UBY0 812 aa15.24■□□□□ 0.03
AMBRA1-210ENST00000531542 TUBE1Q9UJT0 475 aa15.24■□□□□ 0.03
AMBRA1-210ENST00000531542 SQORQ9Y6N5 450 aa15.24■□□□□ 0.03
AMBRA1-210ENST00000531542 V9GY48 417 aaPredicted RBP15.24■□□□□ 0.03
AMBRA1-210ENST00000531542 REV3LO60673 3130 aa15.24■□□□□ 0.03
AMBRA1-210ENST00000531542 CCDC196A0A1B0GTZ2 297 aa15.23■□□□□ 0.03
AMBRA1-210ENST00000531542 STXBP3O00186 592 aa15.23■□□□□ 0.03
AMBRA1-210ENST00000531542 MEIS1O00470 390 aa15.23■□□□□ 0.03
AMBRA1-210ENST00000531542 ATG7O95352 703 aa15.23■□□□□ 0.03
AMBRA1-210ENST00000531542 SREBF1P36956 1147 aa15.23■□□□□ 0.03
AMBRA1-210ENST00000531542 SLC26A2P50443 739 aa15.23■□□□□ 0.03
AMBRA1-210ENST00000531542 ADCY7P51828 1080 aa15.23■□□□□ 0.03
AMBRA1-210ENST00000531542 GRIK4Q16099 956 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms