RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 C7orf43Q8WVR3 580 aa19■□□□□ 0.63
BRCA2-204ENST00000530893 MMS19Q96T76 1030 aa19■□□□□ 0.63
BRCA2-204ENST00000530893 P2RX7Q99572 595 aaKnown RBP19■□□□□ 0.63
BRCA2-204ENST00000530893 TDRD3Q9H7E2 651 aaKnown RBP19■□□□□ 0.63
BRCA2-204ENST00000530893 ABCB6Q9NP58 842 aa19■□□□□ 0.63
BRCA2-204ENST00000530893 TRAF3IP3Q9Y228 551 aa19■□□□□ 0.63
BRCA2-204ENST00000530893 DUSP10Q9Y6W6 482 aa19■□□□□ 0.63
BRCA2-204ENST00000530893 POTEFA5A3E0 1075 aa19■□□□□ 0.63
BRCA2-204ENST00000530893 POTEIP0CG38 1075 aa19■□□□□ 0.63
BRCA2-204ENST00000530893 STAT3P40763 770 aa19■□□□□ 0.63
BRCA2-204ENST00000530893 ADAM9Q13443 819 aa19■□□□□ 0.63
BRCA2-204ENST00000530893 USH1GQ495M9 461 aa19■□□□□ 0.63
BRCA2-204ENST00000530893 POTEGQ6S5H5 508 aa19■□□□□ 0.63
BRCA2-204ENST00000530893 POTEEQ6S8J3 1075 aa19■□□□□ 0.63
BRCA2-204ENST00000530893 RNF10Q8N5U6 811 aaKnown RBP19■□□□□ 0.63
BRCA2-204ENST00000530893 CSRNP1Q96S65 589 aa19■□□□□ 0.63
BRCA2-204ENST00000530893 POLR3CQ9BUI4 534 aaPredicted RBP19■□□□□ 0.63
BRCA2-204ENST00000530893 SNX12Q9UMY4 172 aa19■□□□□ 0.63
BRCA2-204ENST00000530893 RGPD3A6NKT7 1758 aaPredicted RBP18.99■□□□□ 0.63
BRCA2-204ENST00000530893 RGPD4Q7Z3J3 1758 aa18.99■□□□□ 0.63
BRCA2-204ENST00000530893 FAM86B1E9PN63 330 aa18.99■□□□□ 0.63
BRCA2-204ENST00000530893 SERPING1P05155 500 aa18.99■□□□□ 0.63
BRCA2-204ENST00000530893 FAM86B2P0C5J1 330 aa18.99■□□□□ 0.63
BRCA2-204ENST00000530893 SPATA31C1P0DKV0 1188 aa18.99■□□□□ 0.63
BRCA2-204ENST00000530893 GIT2Q14161 759 aa18.99■□□□□ 0.63
BRCA2-204ENST00000530893 AOC3Q16853 763 aa18.99■□□□□ 0.63
BRCA2-204ENST00000530893 MAP9Q49MG5 647 aa18.99■□□□□ 0.63
BRCA2-204ENST00000530893 HGSNATQ68CP4 663 aa18.99■□□□□ 0.63
BRCA2-204ENST00000530893 ZNF572Q7Z3I7 529 aaPredicted RBP18.99■□□□□ 0.63
BRCA2-204ENST00000530893 FGFBP2Q9BYJ0 223 aa18.99■□□□□ 0.63
BRCA2-204ENST00000530893 JADE2Q9NQC1 790 aa18.99■□□□□ 0.63
BRCA2-204ENST00000530893 TBC1D7Q9P0N9 293 aa18.99■□□□□ 0.63
BRCA2-204ENST00000530893 PSME4Q14997 1843 aa18.99■□□□□ 0.63
BRCA2-204ENST00000530893 MAGEA1P43355 309 aa18.98■□□□□ 0.63
BRCA2-204ENST00000530893 GRIPAP1Q4V328 841 aa18.98■□□□□ 0.63
BRCA2-204ENST00000530893 FAM83BQ5T0W9 1011 aa18.98■□□□□ 0.63
BRCA2-204ENST00000530893 SFMBT2Q5VUG0 894 aa18.98■□□□□ 0.63
BRCA2-204ENST00000530893 MSL1Q68DK7 614 aa18.98■□□□□ 0.63
BRCA2-204ENST00000530893 NELFCDQ8IXH7 590 aa18.98■□□□□ 0.63
BRCA2-204ENST00000530893 ACBD3Q9H3P7 528 aa18.98■□□□□ 0.63
BRCA2-204ENST00000530893 ARHGEF10LQ9HCE6 1279 aa18.98■□□□□ 0.63
BRCA2-204ENST00000530893 TMOD2Q9NZR1 351 aa18.98■□□□□ 0.63
BRCA2-204ENST00000530893 PRR12Q9ULL5 1215 aa18.98■□□□□ 0.63
BRCA2-204ENST00000530893 NPHP3-ACAD11A0A0J9YXS1 232 aa18.98■□□□□ 0.63
BRCA2-204ENST00000530893 MSH4O15457 936 aa18.98■□□□□ 0.63
BRCA2-204ENST00000530893 NOL4O94818 638 aa18.98■□□□□ 0.63
BRCA2-204ENST00000530893 TCP1P17987 556 aaKnown RBP18.98■□□□□ 0.63
BRCA2-204ENST00000530893 STAT2P52630 851 aa18.98■□□□□ 0.63
BRCA2-204ENST00000530893 EPM2AIP1Q7L775 607 aaPredicted RBP18.98■□□□□ 0.63
BRCA2-204ENST00000530893 FRMD5Q7Z6J6 570 aa18.98■□□□□ 0.63
BRCA2-204ENST00000530893 CCDC155Q8N6L0 562 aa18.98■□□□□ 0.63
BRCA2-204ENST00000530893 CAGE1Q8TC20 777 aa18.98■□□□□ 0.63
BRCA2-204ENST00000530893 SMCR8Q8TEV9 937 aaPredicted RBP18.98■□□□□ 0.63
BRCA2-204ENST00000530893 RUBCNQ92622 972 aa18.98■□□□□ 0.63
BRCA2-204ENST00000530893 VAV3Q9UKW4 847 aa18.98■□□□□ 0.63
BRCA2-204ENST00000530893 PDXKO00764 312 aa18.97■□□□□ 0.63
BRCA2-204ENST00000530893 OPLAHO14841 1288 aa18.97■□□□□ 0.63
BRCA2-204ENST00000530893 SRGAP2O75044 1071 aa18.97■□□□□ 0.63
BRCA2-204ENST00000530893 EPS15P42566 896 aa18.97■□□□□ 0.63
BRCA2-204ENST00000530893 KNOP1Q1ED39 458 aaKnown RBP18.97■□□□□ 0.63
BRCA2-204ENST00000530893 BMT2Q1RMZ1 405 aa18.97■□□□□ 0.63
BRCA2-204ENST00000530893 CCDC70Q6NSX1 233 aa18.97■□□□□ 0.63
BRCA2-204ENST00000530893 PRMT6Q96LA8 375 aaPredicted RBP18.97■□□□□ 0.63
BRCA2-204ENST00000530893 CALUO43852 315 aaPredicted RBP18.96■□□□□ 0.63
BRCA2-204ENST00000530893 NR2F2P24468 414 aa18.96■□□□□ 0.63
BRCA2-204ENST00000530893 CYP2C19P33261 490 aa18.96■□□□□ 0.63
BRCA2-204ENST00000530893 REEP2Q9BRK0 252 aa18.96■□□□□ 0.63
BRCA2-204ENST00000530893 LSM14BQ9BX40 385 aaKnown RBP18.96■□□□□ 0.63
BRCA2-204ENST00000530893 VIPAS39Q9H9C1 493 aa18.96■□□□□ 0.63
BRCA2-204ENST00000530893 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.96■□□□□ 0.63
BRCA2-204ENST00000530893 GOPCQ9HD26 462 aa18.96■□□□□ 0.63
BRCA2-204ENST00000530893 TSKSQ9UJT2 592 aa18.96■□□□□ 0.63
BRCA2-204ENST00000530893 CAPN6Q9Y6Q1 641 aa18.96■□□□□ 0.63
BRCA2-204ENST00000530893 A0A1W2PRG0 241 aa18.96■□□□□ 0.63
BRCA2-204ENST00000530893 POLR3GO15318 223 aaPredicted RBP18.96■□□□□ 0.63
BRCA2-204ENST00000530893 EYA4O95677 639 aa18.96■□□□□ 0.63
BRCA2-204ENST00000530893 ZNF76P36508 570 aa18.96■□□□□ 0.63
BRCA2-204ENST00000530893 CACNB1Q02641 598 aaPredicted RBP18.96■□□□□ 0.63
BRCA2-204ENST00000530893 PABPC4Q13310 644 aaKnown RBP eCLIP18.96■□□□□ 0.63
BRCA2-204ENST00000530893 CASP8Q14790 479 aa18.96■□□□□ 0.63
BRCA2-204ENST00000530893 TDRD12Q587J7 1177 aaKnown RBP18.96■□□□□ 0.63
BRCA2-204ENST00000530893 CAPZA3Q96KX2 299 aa18.96■□□□□ 0.63
BRCA2-204ENST00000530893 ZHX3Q9H4I2 956 aa18.96■□□□□ 0.63
BRCA2-204ENST00000530893 AIPL1Q9NZN9 384 aa18.96■□□□□ 0.63
BRCA2-204ENST00000530893 TMX2Q9Y320 296 aa18.96■□□□□ 0.63
BRCA2-204ENST00000530893 MUTP22033 750 aa18.95■□□□□ 0.62
BRCA2-204ENST00000530893 SNAP25P60880 206 aa18.95■□□□□ 0.62
BRCA2-204ENST00000530893 PSMC6P62333 389 aa18.95■□□□□ 0.62
BRCA2-204ENST00000530893 JAG1P78504 1218 aa18.95■□□□□ 0.62
BRCA2-204ENST00000530893 CREG2Q8IUH2 290 aa18.95■□□□□ 0.62
BRCA2-204ENST00000530893 NOX5Q96PH1 765 aa18.95■□□□□ 0.62
BRCA2-204ENST00000530893 TUFT1Q9NNX1 390 aa18.95■□□□□ 0.62
BRCA2-204ENST00000530893 NLRC4Q9NPP4 1024 aa18.95■□□□□ 0.62
BRCA2-204ENST00000530893 PLCB1Q9NQ66 1216 aa18.95■□□□□ 0.62
BRCA2-204ENST00000530893 HYOU1Q9Y4L1 999 aa18.95■□□□□ 0.62
BRCA2-204ENST00000530893 GAP43P17677 238 aa18.95■□□□□ 0.62
BRCA2-204ENST00000530893 ERCC3P19447 782 aa18.95■□□□□ 0.62
BRCA2-204ENST00000530893 RPL13P26373 211 aaKnown RBP18.95■□□□□ 0.62
BRCA2-204ENST00000530893 POLR2FP61218 127 aaKnown RBP18.95■□□□□ 0.62
BRCA2-204ENST00000530893 GFPT1Q06210 699 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms