RNA–Protein interactions for RNA: ENST00000530727.5

PTPRC-214, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 1,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-214ENST00000530727 HSP90AA2PQ14568 343 aaPredicted RBP5.42□□□□□ -1.54
PTPRC-214ENST00000530727 NBPF6Q5VWK0 638 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 CIAPIN1Q6FI81 312 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 LDHDQ86WU2 507 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 RPUSD2Q8IZ73 545 aaKnown RBP5.42□□□□□ -1.54
PTPRC-214ENST00000530727 TMEM145Q8NBT3 493 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 MZB1Q8WU39 189 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 SGSM3Q96HU1 749 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 NBPF4Q96M43 638 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 MTA3Q9BTC8 594 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 RXFP1Q9HBX9 757 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 NUDT5Q9UKK9 219 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 HCFC2Q9Y5Z7 792 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 IRAK3Q9Y616 596 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 MADDQ8WXG6 1647 aa5.41□□□□□ -1.54
PTPRC-214ENST00000530727 MYO1BO43795 1136 aa5.41□□□□□ -1.54
PTPRC-214ENST00000530727 NUAK1O60285 661 aa5.41□□□□□ -1.54
PTPRC-214ENST00000530727 RPL11P62913 178 aaKnown RBP5.41□□□□□ -1.54
PTPRC-214ENST00000530727 WWC2Q6AWC2 1192 aa5.41□□□□□ -1.54
PTPRC-214ENST00000530727 CILP2Q8IUL8 1156 aa5.41□□□□□ -1.54
PTPRC-214ENST00000530727 NETO2Q8NC67 525 aa5.41□□□□□ -1.54
PTPRC-214ENST00000530727 KCTD13Q8WZ19 329 aa5.41□□□□□ -1.54
PTPRC-214ENST00000530727 IER2Q9BTL4 223 aa5.41□□□□□ -1.54
PTPRC-214ENST00000530727 IRF2BPLQ9H1B7 796 aa5.41□□□□□ -1.54
PTPRC-214ENST00000530727 TMEFF2Q9UIK5 374 aaPredicted RBP5.41□□□□□ -1.54
PTPRC-214ENST00000530727 LAMC1P11047 1609 aa5.41□□□□□ -1.54
PTPRC-214ENST00000530727 PPLO60437 1756 aa5.41□□□□□ -1.54
PTPRC-214ENST00000530727 POLR1AO95602 1720 aaPredicted RBP5.41□□□□□ -1.54
PTPRC-214ENST00000530727 GPRASP1Q5JY77 1395 aa5.41□□□□□ -1.54
PTPRC-214ENST00000530727 SPATA31D1Q6ZQQ2 1576 aa5.4□□□□□ -1.54
PTPRC-214ENST00000530727 RFXAPO00287 272 aa5.4□□□□□ -1.54
PTPRC-214ENST00000530727 NCKAP1LP55160 1127 aa5.4□□□□□ -1.54
PTPRC-214ENST00000530727 PRR5P85299 388 aa5.4□□□□□ -1.54
PTPRC-214ENST00000530727 NFE2L2Q16236 605 aa5.4□□□□□ -1.54
PTPRC-214ENST00000530727 PLEKHG6Q3KR16 790 aa5.4□□□□□ -1.54
PTPRC-214ENST00000530727 ACBD5Q5T8D3 534 aaPredicted RBP5.4□□□□□ -1.54
PTPRC-214ENST00000530727 CCDC103Q8IW40 242 aa5.4□□□□□ -1.54
PTPRC-214ENST00000530727 TEX2Q8IWB9 1127 aa5.4□□□□□ -1.54
PTPRC-214ENST00000530727 LRRC47Q8N1G4 583 aaKnown RBP5.4□□□□□ -1.54
PTPRC-214ENST00000530727 KREMEN2Q8NCW0 462 aa5.4□□□□□ -1.54
PTPRC-214ENST00000530727 DPF3Q92784 378 aa5.4□□□□□ -1.54
PTPRC-214ENST00000530727 PMM1Q92871 262 aa5.4□□□□□ -1.54
PTPRC-214ENST00000530727 MRFAP1L1Q96HT8 127 aa5.4□□□□□ -1.54
PTPRC-214ENST00000530727 SIGLEC10Q96LC7 697 aa5.4□□□□□ -1.54
PTPRC-214ENST00000530727 AARSD1Q9BTE6 412 aaKnown RBP5.4□□□□□ -1.54
PTPRC-214ENST00000530727 KCTD3Q9Y597 815 aa5.4□□□□□ -1.54
PTPRC-214ENST00000530727 TIMM13Q9Y5L4 95 aaPredicted RBP5.4□□□□□ -1.54
PTPRC-214ENST00000530727 MYO5BQ9ULV0 1848 aa5.4□□□□□ -1.54
PTPRC-214ENST00000530727 NRXN1Q9ULB1 1477 aa5.4□□□□□ -1.54
PTPRC-214ENST00000530727 KIAA1210Q9ULL0 1709 aa5.4□□□□□ -1.54
PTPRC-214ENST00000530727 TMEM131LA2VDJ0 1609 aa5.4□□□□□ -1.55
PTPRC-214ENST00000530727 PDPK1O15530 556 aa5.4□□□□□ -1.55
PTPRC-214ENST00000530727 NTRK1P04629 796 aa5.4□□□□□ -1.55
PTPRC-214ENST00000530727 RGL3Q3MIN7 710 aa5.4□□□□□ -1.55
PTPRC-214ENST00000530727 ZNF385BQ569K4 471 aa5.4□□□□□ -1.55
PTPRC-214ENST00000530727 SMC5Q8IY18 1101 aa5.4□□□□□ -1.55
PTPRC-214ENST00000530727 STAG1Q8WVM7 1258 aa5.4□□□□□ -1.55
PTPRC-214ENST00000530727 PEX11GQ96HA9 241 aa5.4□□□□□ -1.55
PTPRC-214ENST00000530727 CHAMP1Q96JM3 812 aa5.4□□□□□ -1.55
PTPRC-214ENST00000530727 SIRPGQ9P1W8 387 aa5.4□□□□□ -1.55
PTPRC-214ENST00000530727 MSRB2Q9Y3D2 182 aa5.4□□□□□ -1.55
PTPRC-214ENST00000530727 MYOM2P54296 1465 aa5.4□□□□□ -1.55
PTPRC-214ENST00000530727 ERVK-7P63135 1459 aa5.4□□□□□ -1.55
PTPRC-214ENST00000530727 C22orf46C9J442 243 aa5.39□□□□□ -1.55
PTPRC-214ENST00000530727 BUB1BO60566 1050 aaPredicted RBP5.39□□□□□ -1.55
PTPRC-214ENST00000530727 HSPA5P11021 654 aaKnown RBP5.39□□□□□ -1.55
PTPRC-214ENST00000530727 PFKLP17858 780 aa5.39□□□□□ -1.55
PTPRC-214ENST00000530727 PI3P19957 117 aa5.39□□□□□ -1.55
PTPRC-214ENST00000530727 LTBRP36941 435 aa5.39□□□□□ -1.55
PTPRC-214ENST00000530727 GTF2A2P52657 109 aa5.39□□□□□ -1.55
PTPRC-214ENST00000530727 MAP4K2Q12851 820 aa5.39□□□□□ -1.55
PTPRC-214ENST00000530727 SSPNQ14714 243 aa5.39□□□□□ -1.55
PTPRC-214ENST00000530727 MTERF2Q49AM1 385 aa5.39□□□□□ -1.55
PTPRC-214ENST00000530727 SLC35F1Q5T1Q4 408 aa5.39□□□□□ -1.55
PTPRC-214ENST00000530727 IGDCC3Q8IVU1 814 aa5.39□□□□□ -1.55
PTPRC-214ENST00000530727 ALG3Q92685 438 aa5.39□□□□□ -1.55
PTPRC-214ENST00000530727 C1orf159Q96HA4 380 aa5.39□□□□□ -1.55
PTPRC-214ENST00000530727 PCDHA5Q9Y5H7 936 aa5.39□□□□□ -1.55
PTPRC-214ENST00000530727 DNAJC6O75061 913 aa5.38□□□□□ -1.55
PTPRC-214ENST00000530727 CAPNS1P04632 268 aa5.38□□□□□ -1.55
PTPRC-214ENST00000530727 FPR2P25090 351 aa5.38□□□□□ -1.55
PTPRC-214ENST00000530727 DENND5AQ6IQ26 1287 aa5.38□□□□□ -1.55
PTPRC-214ENST00000530727 CEP68Q76N32 757 aa5.38□□□□□ -1.55
PTPRC-214ENST00000530727 APBB1IPQ7Z5R6 666 aaPredicted RBP5.38□□□□□ -1.55
PTPRC-214ENST00000530727 DCP2Q8IU60 420 aaKnown RBP5.38□□□□□ -1.55
PTPRC-214ENST00000530727 RCBTB1Q8NDN9 531 aa5.38□□□□□ -1.55
PTPRC-214ENST00000530727 PLEKHO2Q8TD55 490 aa5.38□□□□□ -1.55
PTPRC-214ENST00000530727 TRMT2BQ96GJ1 504 aaKnown RBP5.38□□□□□ -1.55
PTPRC-214ENST00000530727 SPC25Q9HBM1 224 aa5.38□□□□□ -1.55
PTPRC-214ENST00000530727 ARHGEF4Q9NR80 690 aa5.38□□□□□ -1.55
PTPRC-214ENST00000530727 DDX56Q9NY93 547 aaKnown RBP5.38□□□□□ -1.55
PTPRC-214ENST00000530727 PCDHA2Q9Y5H9 948 aa5.38□□□□□ -1.55
PTPRC-214ENST00000530727 TRAV20A0A0B4J274 112 aa5.38□□□□□ -1.55
PTPRC-214ENST00000530727 ARNTLO00327 626 aa5.38□□□□□ -1.55
PTPRC-214ENST00000530727 IRS4O14654 1257 aaPredicted RBP5.38□□□□□ -1.55
PTPRC-214ENST00000530727 PRODHO43272 600 aa5.38□□□□□ -1.55
PTPRC-214ENST00000530727 DLX3O60479 287 aa5.38□□□□□ -1.55
PTPRC-214ENST00000530727 ZSCAN22P10073 491 aaPredicted RBP5.38□□□□□ -1.55
PTPRC-214ENST00000530727 LCP1P13796 627 aa5.38□□□□□ -1.55
PTPRC-214ENST00000530727 BCL6P41182 706 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms