RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 CYP2C9P11712 490 aa18.32■□□□□ 0.52
TSPAN4-218ENST00000529566 EPHB4P54760 987 aa18.32■□□□□ 0.52
TSPAN4-218ENST00000529566 ACTR2P61160 394 aa18.32■□□□□ 0.52
TSPAN4-218ENST00000529566 SETQ01105 290 aaPredicted RBP18.32■□□□□ 0.52
TSPAN4-218ENST00000529566 NR5A1Q13285 461 aa18.32■□□□□ 0.52
TSPAN4-218ENST00000529566 NONOQ15233 471 aaKnown RBP eCLIP18.32■□□□□ 0.52
TSPAN4-218ENST00000529566 KRT40Q6A162 431 aa18.32■□□□□ 0.52
TSPAN4-218ENST00000529566 MFSD5Q6N075 450 aa18.32■□□□□ 0.52
TSPAN4-218ENST00000529566 C7orf31Q8N865 590 aa18.32■□□□□ 0.52
TSPAN4-218ENST00000529566 TMX3Q96JJ7 454 aa18.32■□□□□ 0.52
TSPAN4-218ENST00000529566 UIMC1Q96RL1 719 aa18.32■□□□□ 0.52
TSPAN4-218ENST00000529566 UBE2OQ9C0C9 1292 aaKnown RBP18.32■□□□□ 0.52
TSPAN4-218ENST00000529566 HIPK3Q9H422 1215 aa18.32■□□□□ 0.52
TSPAN4-218ENST00000529566 LAMA3Q16787 3333 aa18.32■□□□□ 0.52
TSPAN4-218ENST00000529566 A0A1W2PPC1 479 aa18.31■□□□□ 0.52
TSPAN4-218ENST00000529566 MSH4O15457 936 aa18.31■□□□□ 0.52
TSPAN4-218ENST00000529566 CYP2C18P33260 490 aa18.31■□□□□ 0.52
TSPAN4-218ENST00000529566 ZNF200P98182 395 aaPredicted RBP18.31■□□□□ 0.52
TSPAN4-218ENST00000529566 PTGISQ16647 500 aa18.31■□□□□ 0.52
TSPAN4-218ENST00000529566 INF2Q27J81 1249 aa18.31■□□□□ 0.52
TSPAN4-218ENST00000529566 Q4G0T1 1027 aa18.31■□□□□ 0.52
TSPAN4-218ENST00000529566 UTP14CQ5TAP6 766 aaKnown RBP18.31■□□□□ 0.52
TSPAN4-218ENST00000529566 MOXD1Q6UVY6 613 aa18.31■□□□□ 0.52
TSPAN4-218ENST00000529566 ZNF577Q9BSK1 485 aa18.31■□□□□ 0.52
TSPAN4-218ENST00000529566 PPP1R12CQ9BZL4 782 aa18.31■□□□□ 0.52
TSPAN4-218ENST00000529566 RNPEPQ9H4A4 650 aa18.31■□□□□ 0.52
TSPAN4-218ENST00000529566 IGKV6D-21A0A0A0MT36 114 aa18.3■□□□□ 0.52
TSPAN4-218ENST00000529566 FAM205CA6NFA0 338 aa18.3■□□□□ 0.52
TSPAN4-218ENST00000529566 TDP2O95551 362 aa18.3■□□□□ 0.52
TSPAN4-218ENST00000529566 SMIM10L2AP0DMW4 78 aa18.3■□□□□ 0.52
TSPAN4-218ENST00000529566 SMIM10L2BP0DMW5 78 aa18.3■□□□□ 0.52
TSPAN4-218ENST00000529566 KRT2P35908 639 aa18.3■□□□□ 0.52
TSPAN4-218ENST00000529566 HMGN5P82970 282 aaKnown RBP18.3■□□□□ 0.52
TSPAN4-218ENST00000529566 ABHD15Q6UXT9 468 aa18.3■□□□□ 0.52
TSPAN4-218ENST00000529566 PIK3AP1Q6ZUJ8 805 aa18.3■□□□□ 0.52
TSPAN4-218ENST00000529566 DHX38Q92620 1227 aaKnown RBP18.3■□□□□ 0.52
TSPAN4-218ENST00000529566 VWCEQ96DN2 955 aa18.3■□□□□ 0.52
TSPAN4-218ENST00000529566 WNT8AQ9H1J5 351 aa18.3■□□□□ 0.52
TSPAN4-218ENST00000529566 TBC1D22BQ9NU19 505 aa18.3■□□□□ 0.52
TSPAN4-218ENST00000529566 EMSYQ7Z589 1322 aa18.29■□□□□ 0.52
TSPAN4-218ENST00000529566 CCDC194A0A1B0GVG4 234 aa18.29■□□□□ 0.52
TSPAN4-218ENST00000529566 BTBD18B2RXH4 712 aa18.29■□□□□ 0.52
TSPAN4-218ENST00000529566 MCM2P49736 904 aa18.29■□□□□ 0.52
TSPAN4-218ENST00000529566 FOSBP53539 338 aa18.29■□□□□ 0.52
TSPAN4-218ENST00000529566 ADAM17P78536 824 aa18.29■□□□□ 0.52
TSPAN4-218ENST00000529566 FPGSQ05932 587 aa18.29■□□□□ 0.52
TSPAN4-218ENST00000529566 C16orf59Q7L2K0 433 aa18.29■□□□□ 0.52
TSPAN4-218ENST00000529566 SLC5A5Q92911 643 aa18.29■□□□□ 0.52
TSPAN4-218ENST00000529566 ZNF215Q9UL58 517 aaPredicted RBP18.29■□□□□ 0.52
TSPAN4-218ENST00000529566 DDX39AO00148 427 aaKnown RBP18.28■□□□□ 0.52
TSPAN4-218ENST00000529566 CSF2RAP15509 400 aa18.28■□□□□ 0.52
TSPAN4-218ENST00000529566 TRIM71Q2Q1W2 868 aaKnown RBP18.28■□□□□ 0.52
TSPAN4-218ENST00000529566 PPP4R3AQ6IN85 833 aa18.28■□□□□ 0.52
TSPAN4-218ENST00000529566 NEK8Q86SG6 692 aa18.28■□□□□ 0.52
TSPAN4-218ENST00000529566 DIS3L2Q8IYB7 885 aaKnown RBP18.28■□□□□ 0.52
TSPAN4-218ENST00000529566 TDHQ8IZJ6 230 aa18.28■□□□□ 0.52
TSPAN4-218ENST00000529566 FBXO18Q8NFZ0 1043 aa18.28■□□□□ 0.52
TSPAN4-218ENST00000529566 ETNPPLQ8TBG4 499 aa18.28■□□□□ 0.52
TSPAN4-218ENST00000529566 WNT8BQ93098 351 aa18.28■□□□□ 0.52
TSPAN4-218ENST00000529566 GJA10Q969M2 543 aa18.28■□□□□ 0.52
TSPAN4-218ENST00000529566 RIT2Q99578 217 aa18.28■□□□□ 0.52
TSPAN4-218ENST00000529566 SMARCAD1Q9H4L7 1026 aa18.28■□□□□ 0.52
TSPAN4-218ENST00000529566 ERAP1Q9NZ08 941 aa18.28■□□□□ 0.52
TSPAN4-218ENST00000529566 PITPNM1O00562 1244 aa18.27■□□□□ 0.52
TSPAN4-218ENST00000529566 SLC37A4O43826 429 aa18.27■□□□□ 0.52
TSPAN4-218ENST00000529566 PSMD10O75832 226 aa18.27■□□□□ 0.52
TSPAN4-218ENST00000529566 CCL23P55773 120 aa18.27■□□□□ 0.52
TSPAN4-218ENST00000529566 GUCY1B3Q02153 619 aa18.27■□□□□ 0.52
TSPAN4-218ENST00000529566 RBL2Q08999 1139 aa18.27■□□□□ 0.52
TSPAN4-218ENST00000529566 TRIM29Q14134 588 aa18.27■□□□□ 0.52
TSPAN4-218ENST00000529566 SHHQ15465 462 aa18.27■□□□□ 0.52
TSPAN4-218ENST00000529566 LETM2Q2VYF4 491 aa18.27■□□□□ 0.52
TSPAN4-218ENST00000529566 C9orf50Q5SZB4 431 aa18.27■□□□□ 0.52
TSPAN4-218ENST00000529566 ZNF746Q6NUN9 644 aaPredicted RBP18.27■□□□□ 0.52
TSPAN4-218ENST00000529566 B3GNT9Q6UX72 402 aa18.27■□□□□ 0.52
TSPAN4-218ENST00000529566 PLPPR4Q7Z2D5 763 aa18.27■□□□□ 0.52
TSPAN4-218ENST00000529566 TMEM199Q8N511 208 aa18.27■□□□□ 0.52
TSPAN4-218ENST00000529566 GLG1Q92896 1179 aa18.27■□□□□ 0.52
TSPAN4-218ENST00000529566 C8orf76Q96K31 380 aa18.27■□□□□ 0.52
TSPAN4-218ENST00000529566 BRMS1Q9HCU9 246 aa18.27■□□□□ 0.52
TSPAN4-218ENST00000529566 SETD4Q9NVD3 440 aa18.27■□□□□ 0.52
TSPAN4-218ENST00000529566 DDX25Q9UHL0 483 aaKnown RBP18.27■□□□□ 0.52
TSPAN4-218ENST00000529566 TRIP12Q14669 1992 aaPredicted RBP18.27■□□□□ 0.52
TSPAN4-218ENST00000529566 C17orf102A2RUQ5 167 aa18.26■□□□□ 0.51
TSPAN4-218ENST00000529566 PTK7Q13308 1070 aa18.26■□□□□ 0.51
TSPAN4-218ENST00000529566 SERINC5Q86VE9 423 aa18.26■□□□□ 0.51
TSPAN4-218ENST00000529566 AFAP1L1Q8TED9 768 aa18.26■□□□□ 0.51
TSPAN4-218ENST00000529566 KCNMB3Q9NPA1 279 aa18.26■□□□□ 0.51
TSPAN4-218ENST00000529566 NOD1Q9Y239 953 aa18.26■□□□□ 0.51
TSPAN4-218ENST00000529566 LAMA2P24043 3122 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-218ENST00000529566 WNT7AO00755 349 aa18.25■□□□□ 0.51
TSPAN4-218ENST00000529566 TREHO43280 583 aa18.25■□□□□ 0.51
TSPAN4-218ENST00000529566 IQCF3P0C7M6 154 aa18.25■□□□□ 0.51
TSPAN4-218ENST00000529566 GCFC2P16383 781 aaKnown RBP18.25■□□□□ 0.51
TSPAN4-218ENST00000529566 MARK3P27448 753 aa18.25■□□□□ 0.51
TSPAN4-218ENST00000529566 STAT5BP51692 787 aa18.25■□□□□ 0.51
TSPAN4-218ENST00000529566 KRT76Q01546 638 aa18.25■□□□□ 0.51
TSPAN4-218ENST00000529566 PPIGQ13427 754 aaKnown RBP eCLIP18.25■□□□□ 0.513e-12■□□□□ 10.1
TSPAN4-218ENST00000529566 GPNMBQ14956 572 aa18.25■□□□□ 0.51
TSPAN4-218ENST00000529566 PLCB4Q15147 1175 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms