RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 CDC37Q16543 378 aaPredicted RBP13.56□□□□□ -0.24
AMBRA1-207ENST00000529553 PDE12Q6L8Q7 609 aaKnown RBP13.56□□□□□ -0.24
AMBRA1-207ENST00000529553 FAM43BQ6ZT52 329 aaPredicted RBP13.56□□□□□ -0.24
AMBRA1-207ENST00000529553 RBM23Q86U06 439 aaKnown RBP13.56□□□□□ -0.24
AMBRA1-207ENST00000529553 CRIPAKQ8N1N5 446 aa13.56□□□□□ -0.24
AMBRA1-207ENST00000529553 KLHL23Q8NBE8 558 aa13.56□□□□□ -0.24
AMBRA1-207ENST00000529553 NEK1Q96PY6 1258 aa13.56□□□□□ -0.24
AMBRA1-207ENST00000529553 PDCD2LQ9BRP1 358 aa13.56□□□□□ -0.24
AMBRA1-207ENST00000529553 UBA5Q9GZZ9 404 aa13.56□□□□□ -0.24
AMBRA1-207ENST00000529553 TOMM22Q9NS69 142 aa13.56□□□□□ -0.24
AMBRA1-207ENST00000529553 MRPL42Q9Y6G3 142 aaKnown RBP13.56□□□□□ -0.24
AMBRA1-207ENST00000529553 DCHS1Q96JQ0 3298 aa13.56□□□□□ -0.24
AMBRA1-207ENST00000529553 PDGFBP01127 241 aaPredicted RBP13.55□□□□□ -0.24
AMBRA1-207ENST00000529553 UBA1P22314 1058 aaKnown RBP13.55□□□□□ -0.24
AMBRA1-207ENST00000529553 NT5C2P49902 561 aa13.55□□□□□ -0.24
AMBRA1-207ENST00000529553 TAF2Q6P1X5 1199 aa13.55□□□□□ -0.24
AMBRA1-207ENST00000529553 ZBTB33Q86T24 672 aa13.55□□□□□ -0.24
AMBRA1-207ENST00000529553 RSPH3Q86UC2 560 aa13.55□□□□□ -0.24
AMBRA1-207ENST00000529553 DGKHQ86XP1 1220 aa13.55□□□□□ -0.24
AMBRA1-207ENST00000529553 ADGRF4Q8IZF3 695 aa13.55□□□□□ -0.24
AMBRA1-207ENST00000529553 S1PR5Q9H228 398 aa13.55□□□□□ -0.24
AMBRA1-207ENST00000529553 NR2E1Q9Y466 385 aa13.55□□□□□ -0.24
AMBRA1-207ENST00000529553 FAM186AA6NE01 2351 aa13.55□□□□□ -0.24
AMBRA1-207ENST00000529553 TTC41PQ6P2S7 1318 aa13.55□□□□□ -0.24
AMBRA1-207ENST00000529553 NRCAMQ92823 1304 aa13.55□□□□□ -0.24
AMBRA1-207ENST00000529553 PLXNA3P51805 1871 aa13.55□□□□□ -0.24
AMBRA1-207ENST00000529553 CFBP00751 764 aa13.54□□□□□ -0.24
AMBRA1-207ENST00000529553 GOLGA8HP0CJ92 632 aa13.54□□□□□ -0.24
AMBRA1-207ENST00000529553 STAG3L1P0CL83 205 aa13.54□□□□□ -0.24
AMBRA1-207ENST00000529553 SRGAP2BP0DMP2 458 aa13.54□□□□□ -0.24
AMBRA1-207ENST00000529553 GHRP10912 638 aa13.54□□□□□ -0.24
AMBRA1-207ENST00000529553 MYCLP12524 364 aaPredicted RBP13.54□□□□□ -0.24
AMBRA1-207ENST00000529553 CLCN5P51795 746 aa13.54□□□□□ -0.24
AMBRA1-207ENST00000529553 LPIN1Q14693 890 aa13.54□□□□□ -0.24
AMBRA1-207ENST00000529553 RRP12Q5JTH9 1297 aaKnown RBP13.54□□□□□ -0.24
AMBRA1-207ENST00000529553 ASTLQ6HA08 431 aaPredicted RBP13.54□□□□□ -0.24
AMBRA1-207ENST00000529553 FRMD5Q7Z6J6 570 aa13.54□□□□□ -0.24
AMBRA1-207ENST00000529553 NPAS4Q8IUM7 802 aa13.54□□□□□ -0.24
AMBRA1-207ENST00000529553 TMEM105Q8N8V8 129 aa13.54□□□□□ -0.24
AMBRA1-207ENST00000529553 KREMEN2Q8NCW0 462 aa13.54□□□□□ -0.24
AMBRA1-207ENST00000529553 FTHL17Q9BXU8 183 aa13.54□□□□□ -0.24
AMBRA1-207ENST00000529553 ZNF215Q9UL58 517 aaPredicted RBP13.54□□□□□ -0.24
AMBRA1-207ENST00000529553 SORCS3Q9UPU3 1222 aa13.54□□□□□ -0.24
AMBRA1-207ENST00000529553 SQORQ9Y6N5 450 aa13.54□□□□□ -0.24
AMBRA1-207ENST00000529553 NLRC5Q86WI3 1866 aa13.54□□□□□ -0.24
AMBRA1-207ENST00000529553 NOP56O00567 594 aaKnown RBP13.53□□□□□ -0.24
AMBRA1-207ENST00000529553 CSPG5O95196 566 aa13.53□□□□□ -0.24
AMBRA1-207ENST00000529553 FGAP02671 866 aa13.53□□□□□ -0.24
AMBRA1-207ENST00000529553 RPLP2P05387 115 aaKnown RBP13.53□□□□□ -0.24
AMBRA1-207ENST00000529553 HOXB8P17481 243 aaPredicted RBP13.53□□□□□ -0.24
AMBRA1-207ENST00000529553 ARHGAP4P98171 946 aa13.53□□□□□ -0.24
AMBRA1-207ENST00000529553 MGAT3Q09327 533 aa13.53□□□□□ -0.24
AMBRA1-207ENST00000529553 MTMR3Q13615 1198 aa13.53□□□□□ -0.24
AMBRA1-207ENST00000529553 NEDD9Q14511 834 aa13.53□□□□□ -0.24
AMBRA1-207ENST00000529553 PGM5Q15124 567 aa13.53□□□□□ -0.24
AMBRA1-207ENST00000529553 DUSP6Q16828 381 aa13.53□□□□□ -0.24
AMBRA1-207ENST00000529553 QRICH1Q2TAL8 776 aa13.53□□□□□ -0.24
AMBRA1-207ENST00000529553 CCDC178Q5BJE1 867 aa13.53□□□□□ -0.24
AMBRA1-207ENST00000529553 FBXO47Q5MNV8 452 aa13.53□□□□□ -0.24
AMBRA1-207ENST00000529553 TSHZ3Q63HK5 1081 aa13.53□□□□□ -0.24
AMBRA1-207ENST00000529553 METTL7BQ6UX53 244 aa13.53□□□□□ -0.24
AMBRA1-207ENST00000529553 RASGRP4Q8TDF6 673 aa13.53□□□□□ -0.24
AMBRA1-207ENST00000529553 MICAL1Q8TDZ2 1067 aa13.53□□□□□ -0.24
AMBRA1-207ENST00000529553 DCTPP1Q9H773 170 aa13.53□□□□□ -0.24
AMBRA1-207ENST00000529553 CCDC171Q6TFL3 1326 aa13.53□□□□□ -0.24
AMBRA1-207ENST00000529553 SORBS3O60504 671 aa13.52□□□□□ -0.25
AMBRA1-207ENST00000529553 STAM2O75886 525 aa13.52□□□□□ -0.25
AMBRA1-207ENST00000529553 CCND2P30279 289 aa13.52□□□□□ -0.25
AMBRA1-207ENST00000529553 KCNC3Q14003 757 aa13.52□□□□□ -0.25
AMBRA1-207ENST00000529553 ASPRV1Q53RT3 343 aa13.52□□□□□ -0.25
AMBRA1-207ENST00000529553 VPS53Q5VIR6 699 aa13.52□□□□□ -0.25
AMBRA1-207ENST00000529553 TSHZ1Q6ZSZ6 1077 aa13.52□□□□□ -0.25
AMBRA1-207ENST00000529553 LMBR1Q8WVP7 490 aa13.52□□□□□ -0.25
AMBRA1-207ENST00000529553 GPR20Q99678 358 aa13.52□□□□□ -0.25
AMBRA1-207ENST00000529553 AMNQ9BXJ7 453 aa13.52□□□□□ -0.25
AMBRA1-207ENST00000529553 CPVLQ9H3G5 476 aa13.52□□□□□ -0.25
AMBRA1-207ENST00000529553 SEMA4AQ9H3S1 761 aa13.52□□□□□ -0.25
AMBRA1-207ENST00000529553 JMJD4Q9H9V9 463 aa13.52□□□□□ -0.25
AMBRA1-207ENST00000529553 AAASQ9NRG9 546 aa13.52□□□□□ -0.25
AMBRA1-207ENST00000529553 HELLSQ9NRZ9 838 aa13.52□□□□□ -0.25
AMBRA1-207ENST00000529553 PCDHB12Q9Y5F1 795 aa13.52□□□□□ -0.25
AMBRA1-207ENST00000529553 KIAA1217Q5T5P2 1943 aa13.52□□□□□ -0.25
AMBRA1-207ENST00000529553 OPLAHO14841 1288 aa13.51□□□□□ -0.25
AMBRA1-207ENST00000529553 PER2O15055 1255 aa13.51□□□□□ -0.25
AMBRA1-207ENST00000529553 GNPTABQ3T906 1256 aa13.51□□□□□ -0.25
AMBRA1-207ENST00000529553 ANKRD54Q6NXT1 300 aa13.51□□□□□ -0.25
AMBRA1-207ENST00000529553 MFSD6Q6ZSS7 791 aa13.51□□□□□ -0.25
AMBRA1-207ENST00000529553 RTN4RL1Q86UN2 441 aaPredicted RBP13.51□□□□□ -0.25
AMBRA1-207ENST00000529553 TICAM2Q86XR7 235 aa13.51□□□□□ -0.25
AMBRA1-207ENST00000529553 VN1R2Q8NFZ6 395 aa13.51□□□□□ -0.25
AMBRA1-207ENST00000529553 PI4K2BQ8TCG2 481 aa13.51□□□□□ -0.25
AMBRA1-207ENST00000529553 RNF216Q9NWF9 866 aaPredicted RBP13.51□□□□□ -0.25
AMBRA1-207ENST00000529553 PCDHGC5Q9Y5F6 944 aa13.51□□□□□ -0.25
AMBRA1-207ENST00000529553 GVINP1Q7Z2Y8 2422 aa13.51□□□□□ -0.25
AMBRA1-207ENST00000529553 ZMYM6O95789 1325 aa13.5□□□□□ -0.25
AMBRA1-207ENST00000529553 SPATA31C2B4DYI2 1134 aa13.5□□□□□ -0.25
AMBRA1-207ENST00000529553 BRD1O95696 1058 aa13.5□□□□□ -0.25
AMBRA1-207ENST00000529553 TRAF1Q13077 416 aa13.5□□□□□ -0.25
AMBRA1-207ENST00000529553 DGLUCYQ7Z3D6 616 aa13.5□□□□□ -0.25
AMBRA1-207ENST00000529553 PNMA1Q8ND90 353 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms