RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 SORBS3O60504 671 aa13.78□□□□□ -0.2
COPB1-206ENST00000529210 ATP2A2P16615 1042 aaKnown RBP13.78□□□□□ -0.2
COPB1-206ENST00000529210 PBX2P40425 430 aa13.78□□□□□ -0.2
COPB1-206ENST00000529210 CHMP4BP1P59074 171 aa13.78□□□□□ -0.2
COPB1-206ENST00000529210 ZNF200P98182 395 aaPredicted RBP13.78□□□□□ -0.2
COPB1-206ENST00000529210 CNKSR3Q6P9H4 555 aa13.78□□□□□ -0.2
COPB1-206ENST00000529210 DEFB128Q7Z7B8 93 aa13.78□□□□□ -0.2
COPB1-206ENST00000529210 RPAINQ86UA6 219 aa13.78□□□□□ -0.2
COPB1-206ENST00000529210 FAM177A1Q8N128 213 aaPredicted RBP13.78□□□□□ -0.2
COPB1-206ENST00000529210 WNT8BQ93098 351 aa13.78□□□□□ -0.2
COPB1-206ENST00000529210 KCNH7Q9NS40 1196 aa13.78□□□□□ -0.2
COPB1-206ENST00000529210 CYP46A1Q9Y6A2 500 aa13.78□□□□□ -0.2
COPB1-206ENST00000529210 NRCAMQ92823 1304 aa13.78□□□□□ -0.2
COPB1-206ENST00000529210 UNC80Q8N2C7 3258 aa13.78□□□□□ -0.2
COPB1-206ENST00000529210 NBNO60934 754 aa13.77□□□□□ -0.21
COPB1-206ENST00000529210 EFCAB14O75071 495 aa13.77□□□□□ -0.21
COPB1-206ENST00000529210 LGR5O75473 907 aa13.77□□□□□ -0.21
COPB1-206ENST00000529210 GNA11P29992 359 aa13.77□□□□□ -0.21
COPB1-206ENST00000529210 TCF7P36402 384 aaPredicted RBP13.77□□□□□ -0.21
COPB1-206ENST00000529210 ANAPC15P60006 121 aa13.77□□□□□ -0.21
COPB1-206ENST00000529210 ARHGAP4P98171 946 aa13.77□□□□□ -0.21
COPB1-206ENST00000529210 PTPRSQ13332 1948 aa13.77□□□□□ -0.21
COPB1-206ENST00000529210 GRIN2CQ14957 1233 aa13.77□□□□□ -0.21
COPB1-206ENST00000529210 ZNF618Q5T7W0 954 aa13.77□□□□□ -0.21
COPB1-206ENST00000529210 KAT6AQ92794 2004 aa13.77□□□□□ -0.21
COPB1-206ENST00000529210 ATP6V0A1Q93050 837 aa13.77□□□□□ -0.21
COPB1-206ENST00000529210 SH3GLB2Q9NR46 395 aa13.77□□□□□ -0.21
COPB1-206ENST00000529210 YBX2Q9Y2T7 364 aaKnown RBP13.77□□□□□ -0.21
COPB1-206ENST00000529210 TELO2Q9Y4R8 837 aa13.77□□□□□ -0.21
COPB1-206ENST00000529210 A0A0C4DFX4 3053 aa13.76□□□□□ -0.21
COPB1-206ENST00000529210 ABHD14A-ACY1A0A1B0GW23 586 aa13.76□□□□□ -0.21
COPB1-206ENST00000529210 ZBBXA8MT70 800 aa13.76□□□□□ -0.21
COPB1-206ENST00000529210 TREHO43280 583 aa13.76□□□□□ -0.21
COPB1-206ENST00000529210 ATG7O95352 703 aa13.76□□□□□ -0.21
COPB1-206ENST00000529210 MKRN4PQ13434 485 aaPredicted RBP13.76□□□□□ -0.21
COPB1-206ENST00000529210 MBTPS1Q14703 1052 aa13.76□□□□□ -0.21
COPB1-206ENST00000529210 TRIM50Q86XT4 487 aa13.76□□□□□ -0.21
COPB1-206ENST00000529210 CCDC148Q8NFR7 591 aa13.76□□□□□ -0.21
COPB1-206ENST00000529210 CYP2W1Q8TAV3 490 aa13.76□□□□□ -0.21
COPB1-206ENST00000529210 BICD2Q8TD16 824 aa13.76□□□□□ -0.21
COPB1-206ENST00000529210 MYLIPQ8WY64 445 aa13.76□□□□□ -0.21
COPB1-206ENST00000529210 SMARCAD1Q9H4L7 1026 aa13.76□□□□□ -0.21
COPB1-206ENST00000529210 AGO4Q9HCK5 861 aaKnown RBP13.76□□□□□ -0.21
COPB1-206ENST00000529210 C6orf50Q9HD87 102 aa13.76□□□□□ -0.21
COPB1-206ENST00000529210 JPH1Q9HDC5 661 aaPredicted RBP13.76□□□□□ -0.21
COPB1-206ENST00000529210 ERAP1Q9NZ08 941 aa13.76□□□□□ -0.21
COPB1-206ENST00000529210 SLC9A2Q9UBY0 812 aa13.76□□□□□ -0.21
COPB1-206ENST00000529210 NAP1L2Q9ULW6 460 aaPredicted RBP13.76□□□□□ -0.21
COPB1-206ENST00000529210 TRANK1O15050 2925 aa13.76□□□□□ -0.21
COPB1-206ENST00000529210 IGLV3-22A0A075B6J6 115 aa13.75□□□□□ -0.21
COPB1-206ENST00000529210 MBLAC1A4D2B0 266 aaPredicted RBP13.75□□□□□ -0.21
COPB1-206ENST00000529210 EIF5BO60841 1220 aaKnown RBP13.75□□□□□ -0.21
COPB1-206ENST00000529210 ARP10275 920 aa13.75□□□□□ -0.21
COPB1-206ENST00000529210 CIITAP33076 1130 aa13.75□□□□□ -0.21
COPB1-206ENST00000529210 WDR5P61964 334 aaKnown RBP13.75□□□□□ -0.21
COPB1-206ENST00000529210 AKAP17AQ02040 695 aaKnown RBP13.75□□□□□ -0.21
COPB1-206ENST00000529210 FAM26DQ5JW98 314 aa13.75□□□□□ -0.21
COPB1-206ENST00000529210 REXO1Q8N1G1 1221 aaKnown RBP13.75□□□□□ -0.21
COPB1-206ENST00000529210 SLC17A8Q8NDX2 589 aa13.75□□□□□ -0.21
COPB1-206ENST00000529210 LMBR1Q8WVP7 490 aa13.75□□□□□ -0.21
COPB1-206ENST00000529210 PHKBQ93100 1093 aa13.75□□□□□ -0.21
COPB1-206ENST00000529210 PGBD1Q96JS3 809 aa13.75□□□□□ -0.21
COPB1-206ENST00000529210 PCYT2Q99447 389 aa13.75□□□□□ -0.21
COPB1-206ENST00000529210 FTOQ9C0B1 505 aaKnown RBP eCLIP13.75□□□□□ -0.213e-14■□□□□ 8.6
COPB1-206ENST00000529210 SLC28A3Q9HAS3 691 aa13.75□□□□□ -0.21
COPB1-206ENST00000529210 SETD4Q9NVD3 440 aa13.75□□□□□ -0.21
COPB1-206ENST00000529210 TMEM260Q9NX78 707 aa13.75□□□□□ -0.21
COPB1-206ENST00000529210 PRUNE2Q8WUY3 3088 aa13.75□□□□□ -0.21
COPB1-206ENST00000529210 IGKV6D-21A0A0A0MT36 114 aa13.74□□□□□ -0.21
COPB1-206ENST00000529210 RSPH10B2B2RC85 870 aa13.74□□□□□ -0.21
COPB1-206ENST00000529210 FAM86B1E9PN63 330 aa13.74□□□□□ -0.21
COPB1-206ENST00000529210 RPLP2P05387 115 aaKnown RBP13.74□□□□□ -0.21
COPB1-206ENST00000529210 CENPBP07199 599 aaPredicted RBP13.74□□□□□ -0.21
COPB1-206ENST00000529210 FAM86B2P0C5J1 330 aa13.74□□□□□ -0.21
COPB1-206ENST00000529210 RSPH10BP0C881 870 aa13.74□□□□□ -0.21
COPB1-206ENST00000529210 FOSL2P15408 326 aa13.74□□□□□ -0.21
COPB1-206ENST00000529210 SLC26A2P50443 739 aa13.74□□□□□ -0.21
COPB1-206ENST00000529210 SETQ01105 290 aaPredicted RBP13.74□□□□□ -0.21
COPB1-206ENST00000529210 ITGB3BPQ13352 177 aaPredicted RBP13.74□□□□□ -0.21
COPB1-206ENST00000529210 PLEKHG4Q58EX7 1191 aa13.74□□□□□ -0.21
COPB1-206ENST00000529210 UTP14CQ5TAP6 766 aaKnown RBP13.74□□□□□ -0.21
COPB1-206ENST00000529210 TAF2Q6P1X5 1199 aa13.74□□□□□ -0.21
COPB1-206ENST00000529210 PLPPR4Q7Z2D5 763 aa13.74□□□□□ -0.21
COPB1-206ENST00000529210 HERC6Q8IVU3 1022 aa13.74□□□□□ -0.21
COPB1-206ENST00000529210 MAFAQ8NHW3 353 aaPredicted RBP13.74□□□□□ -0.21
COPB1-206ENST00000529210 TNPO1Q92973 898 aaKnown RBP13.74□□□□□ -0.21
COPB1-206ENST00000529210 SDF4Q9BRK5 362 aa13.74□□□□□ -0.21
COPB1-206ENST00000529210 NKX2-4Q9H2Z4 354 aa13.74□□□□□ -0.21
COPB1-206ENST00000529210 MICAL3Q7RTP6 2002 aa13.74□□□□□ -0.21
COPB1-206ENST00000529210 RRN3P2A6NIE6 340 aa13.73□□□□□ -0.21
COPB1-206ENST00000529210 ADAMTS3O15072 1205 aa13.73□□□□□ -0.21
COPB1-206ENST00000529210 DHX15O43143 795 aaKnown RBP13.73□□□□□ -0.21
COPB1-206ENST00000529210 THPOP40225 353 aa13.73□□□□□ -0.21
COPB1-206ENST00000529210 KCNJ6P48051 423 aa13.73□□□□□ -0.21
COPB1-206ENST00000529210 RABGGTBP53611 331 aa13.73□□□□□ -0.21
COPB1-206ENST00000529210 ACTR2P61160 394 aa13.73□□□□□ -0.21
COPB1-206ENST00000529210 CCT2P78371 535 aaKnown RBP13.73□□□□□ -0.21
COPB1-206ENST00000529210 SP4Q02446 784 aa13.73□□□□□ -0.21
COPB1-206ENST00000529210 IKBKEQ14164 716 aa13.73□□□□□ -0.21
COPB1-206ENST00000529210 JAKMIP3Q5VZ66 844 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms