RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 MMP1P03956 469 aa22.05■■□□□ 1.12
SSRP1-204ENST00000529002 VCPP55072 806 aaKnown RBP22.05■■□□□ 1.12
SSRP1-204ENST00000529002 RRP1P56182 461 aaKnown RBP22.05■■□□□ 1.12
SSRP1-204ENST00000529002 ZXDAP98168 799 aa22.05■■□□□ 1.12
SSRP1-204ENST00000529002 ARHGAP4P98171 946 aa22.05■■□□□ 1.12
SSRP1-204ENST00000529002 GHRHRQ02643 423 aa22.05■■□□□ 1.12
SSRP1-204ENST00000529002 BTG3Q14201 252 aaPredicted RBP22.05■■□□□ 1.12
SSRP1-204ENST00000529002 RUFY4Q6ZNE9 571 aa22.05■■□□□ 1.12
SSRP1-204ENST00000529002 LMBR1Q8WVP7 490 aa22.05■■□□□ 1.12
SSRP1-204ENST00000529002 CLP1Q92989 425 aaKnown RBP22.05■■□□□ 1.12
SSRP1-204ENST00000529002 RNF41Q9H4P4 317 aaPredicted RBP22.05■■□□□ 1.12
SSRP1-204ENST00000529002 PLAGL2Q9UPG8 496 aa22.05■■□□□ 1.12
SSRP1-204ENST00000529002 PCDHGC5Q9Y5F6 944 aa22.05■■□□□ 1.12
SSRP1-204ENST00000529002 TRIM6-TRIM34B2RNG4 842 aa22.04■■□□□ 1.12
SSRP1-204ENST00000529002 ENPP3O14638 875 aa22.04■■□□□ 1.12
SSRP1-204ENST00000529002 PCP11498 1178 aaKnown RBP22.04■■□□□ 1.12
SSRP1-204ENST00000529002 ADAM17P78536 824 aa22.04■■□□□ 1.12
SSRP1-204ENST00000529002 CYFIP1Q7L576 1253 aa22.04■■□□□ 1.12
SSRP1-204ENST00000529002 SUGP1Q8IWZ8 645 aaKnown RBP22.04■■□□□ 1.12
SSRP1-204ENST00000529002 ZNF689Q96CS4 500 aaPredicted RBP22.04■■□□□ 1.12
SSRP1-204ENST00000529002 ZSCAN10Q96SZ4 725 aaPredicted RBP22.04■■□□□ 1.12
SSRP1-204ENST00000529002 PCDHA1Q9Y5I3 950 aa22.04■■□□□ 1.12
SSRP1-204ENST00000529002 MRPL42Q9Y6G3 142 aaKnown RBP22.04■■□□□ 1.12
SSRP1-204ENST00000529002 ZFHX2Q9C0A1 2572 aaPredicted RBP22.04■■□□□ 1.12
SSRP1-204ENST00000529002 MYO10Q9HD67 2058 aa22.03■■□□□ 1.12
SSRP1-204ENST00000529002 LOC730098B7Z3J9 87 aa22.03■■□□□ 1.12
SSRP1-204ENST00000529002 NOP56O00567 594 aaKnown RBP22.03■■□□□ 1.12
SSRP1-204ENST00000529002 GFRA3O60609 400 aa22.03■■□□□ 1.12
SSRP1-204ENST00000529002 EYA4O95677 639 aa22.03■■□□□ 1.12
SSRP1-204ENST00000529002 ITGB1P05556 798 aa22.03■■□□□ 1.12
SSRP1-204ENST00000529002 TGFB3P10600 412 aa22.03■■□□□ 1.12
SSRP1-204ENST00000529002 CCND2P30279 289 aa22.03■■□□□ 1.12
SSRP1-204ENST00000529002 PDE1AP54750 535 aa22.03■■□□□ 1.12
SSRP1-204ENST00000529002 SP4Q02446 784 aa22.03■■□□□ 1.12
SSRP1-204ENST00000529002 SEMA3FQ13275 785 aa22.03■■□□□ 1.12
SSRP1-204ENST00000529002 LPIN1Q14693 890 aa22.03■■□□□ 1.12
SSRP1-204ENST00000529002 SLC35G1Q2M3R5 365 aa22.03■■□□□ 1.12
SSRP1-204ENST00000529002 ANKRD45Q5TZF3 282 aa22.03■■□□□ 1.12
SSRP1-204ENST00000529002 RBM23Q86U06 439 aaKnown RBP22.03■■□□□ 1.12
SSRP1-204ENST00000529002 IQCA1Q86XH1 822 aa22.03■■□□□ 1.12
SSRP1-204ENST00000529002 FBXL6Q8N531 539 aa22.03■■□□□ 1.12
SSRP1-204ENST00000529002 GPR20Q99678 358 aa22.03■■□□□ 1.12
SSRP1-204ENST00000529002 EHMT1Q9H9B1 1298 aa22.03■■□□□ 1.12
SSRP1-204ENST00000529002 BARX2Q9UMQ3 279 aaPredicted RBP22.03■■□□□ 1.12
SSRP1-204ENST00000529002 RWDD3Q9Y3V2 267 aa22.03■■□□□ 1.12
SSRP1-204ENST00000529002 MRPS9P82933 396 aaKnown RBP22.02■■□□□ 1.12
SSRP1-204ENST00000529002 RBM10P98175 930 aaKnown RBP22.02■■□□□ 1.12
SSRP1-204ENST00000529002 LINC01599Q8WXQ3 324 aa22.02■■□□□ 1.12
SSRP1-204ENST00000529002 USP26Q9BXU7 913 aa22.02■■□□□ 1.12
SSRP1-204ENST00000529002 RTEL1Q9NZ71 1219 aa22.02■■□□□ 1.12
SSRP1-204ENST00000529002 ZSWIM5Q9P217 1185 aa22.02■■□□□ 1.12
SSRP1-204ENST00000529002 SPTBN4Q9H254 2564 aa22.02■■□□□ 1.12
SSRP1-204ENST00000529002 ZNF213O14771 459 aa22.01■■□□□ 1.11
SSRP1-204ENST00000529002 DGKIO75912 1065 aa22.01■■□□□ 1.11
SSRP1-204ENST00000529002 GLP2RO95838 553 aa22.01■■□□□ 1.11
SSRP1-204ENST00000529002 NRIP1P48552 1158 aa22.01■■□□□ 1.11
SSRP1-204ENST00000529002 HOMER1Q86YM7 354 aa22.01■■□□□ 1.11
SSRP1-204ENST00000529002 SMRP1Q8NCR6 262 aa22.01■■□□□ 1.11
SSRP1-204ENST00000529002 SPPL3Q8TCT6 385 aa22.01■■□□□ 1.11
SSRP1-204ENST00000529002 MTMR8Q96EF0 704 aa22.01■■□□□ 1.11
SSRP1-204ENST00000529002 USP15Q9Y4E8 981 aaPredicted RBP22.01■■□□□ 1.11
SSRP1-204ENST00000529002 KLRF2D3W0D1 207 aa22■■□□□ 1.11
SSRP1-204ENST00000529002 ZBTB5O15062 677 aa22■■□□□ 1.11
SSRP1-204ENST00000529002 GNAT1P11488 350 aa22■■□□□ 1.11
SSRP1-204ENST00000529002 GATMP50440 423 aa22■■□□□ 1.11
SSRP1-204ENST00000529002 MGAT3Q09327 533 aa22■■□□□ 1.11
SSRP1-204ENST00000529002 PAN2Q504Q3 1202 aaKnown RBP22■■□□□ 1.11
SSRP1-204ENST00000529002 KLHL23Q8NBE8 558 aa22■■□□□ 1.11
SSRP1-204ENST00000529002 ZBTB10Q96DT7 871 aa22■■□□□ 1.11
SSRP1-204ENST00000529002 RPGRIP1Q96KN7 1286 aa22■■□□□ 1.11
SSRP1-204ENST00000529002 GCOM1H8Y6P7 765 aaPredicted RBP21.99■■□□□ 1.11
SSRP1-204ENST00000529002 POLR2MP0CAP2 368 aa21.99■■□□□ 1.11
SSRP1-204ENST00000529002 CBX2Q14781 532 aaPredicted RBP21.99■■□□□ 1.11
SSRP1-204ENST00000529002 CCDC178Q5BJE1 867 aa21.99■■□□□ 1.11
SSRP1-204ENST00000529002 METTL7BQ6UX53 244 aa21.99■■□□□ 1.11
SSRP1-204ENST00000529002 RTN4RL1Q86UN2 441 aaPredicted RBP21.99■■□□□ 1.11
SSRP1-204ENST00000529002 EFHBQ8N7U6 833 aa21.99■■□□□ 1.11
SSRP1-204ENST00000529002 PLVAPQ9BX97 442 aa21.99■■□□□ 1.11
SSRP1-204ENST00000529002 AGO3Q9H9G7 860 aaKnown RBP21.99■■□□□ 1.11
SSRP1-204ENST00000529002 SPATA31C2B4DYI2 1134 aa21.98■■□□□ 1.11
SSRP1-204ENST00000529002 PDGFBP01127 241 aaPredicted RBP21.98■■□□□ 1.11
SSRP1-204ENST00000529002 COASYQ13057 564 aa21.98■■□□□ 1.11
SSRP1-204ENST00000529002 FBXO47Q5MNV8 452 aa21.98■■□□□ 1.11
SSRP1-204ENST00000529002 POF1BQ8WVV4 589 aa21.98■■□□□ 1.11
SSRP1-204ENST00000529002 DNAJB3Q8WWF6 145 aa21.98■■□□□ 1.11
SSRP1-204ENST00000529002 RILPL2Q969X0 211 aa21.98■■□□□ 1.11
SSRP1-204ENST00000529002 ASIC4Q96FT7 647 aa21.98■■□□□ 1.11
SSRP1-204ENST00000529002 PIGSQ96S52 555 aa21.98■■□□□ 1.11
SSRP1-204ENST00000529002 MAP3K20Q9NYL2 800 aaKnown RBP21.98■■□□□ 1.11
SSRP1-204ENST00000529002 MAD2L2Q9UI95 211 aa21.98■■□□□ 1.11
SSRP1-204ENST00000529002 PPFIA3O75145 1194 aa21.97■■□□□ 1.11
SSRP1-204ENST00000529002 ICAM3P32942 547 aa21.97■■□□□ 1.11
SSRP1-204ENST00000529002 SIGLEC14Q08ET2 396 aa21.97■■□□□ 1.11
SSRP1-204ENST00000529002 ATOH1Q92858 354 aaPredicted RBP21.97■■□□□ 1.11
SSRP1-204ENST00000529002 P2RX5Q93086 422 aa21.97■■□□□ 1.11
SSRP1-204ENST00000529002 INPP4AQ96PE3 977 aaPredicted RBP21.97■■□□□ 1.11
SSRP1-204ENST00000529002 PRRX2Q99811 253 aa21.97■■□□□ 1.11
SSRP1-204ENST00000529002 CDY2AQ9Y6F7 541 aa21.97■■□□□ 1.11
SSRP1-204ENST00000529002 FNDC1Q4ZHG4 1894 aaPredicted RBP21.96■■□□□ 1.11
SSRP1-204ENST00000529002 RIF1Q5UIP0 2472 aaKnown RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms