RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 PLS1Q14651 629 aa9.94□□□□□ -0.82
SSBP3-212ENST00000528930 CLUL1Q15846 466 aa9.94□□□□□ -0.82
SSBP3-212ENST00000528930 PTPN21Q16825 1174 aa9.94□□□□□ -0.82
SSBP3-212ENST00000528930 RRP12Q5JTH9 1297 aaKnown RBP9.94□□□□□ -0.82
SSBP3-212ENST00000528930 GNASQ5JWF2 1037 aa9.94□□□□□ -0.82
SSBP3-212ENST00000528930 SLFN13Q68D06 897 aa9.94□□□□□ -0.82
SSBP3-212ENST00000528930 MFSD6Q6ZSS7 791 aa9.94□□□□□ -0.82
SSBP3-212ENST00000528930 CENPQQ7L2Z9 268 aaPredicted RBP9.94□□□□□ -0.82
SSBP3-212ENST00000528930 TMCO2Q7Z6W1 182 aaPredicted RBP9.94□□□□□ -0.82
SSBP3-212ENST00000528930 SKAP1Q86WV1 359 aa9.94□□□□□ -0.82
SSBP3-212ENST00000528930 RIOX2Q8IUF8 465 aa9.94□□□□□ -0.82
SSBP3-212ENST00000528930 PRPF38AQ8NAV1 312 aaKnown RBP9.94□□□□□ -0.82
SSBP3-212ENST00000528930 SLF1Q9BQI6 1058 aa9.94□□□□□ -0.82
SSBP3-212ENST00000528930 C17orf80Q9BSJ5 609 aa9.94□□□□□ -0.82
SSBP3-212ENST00000528930 STX8Q9UNK0 236 aa9.94□□□□□ -0.82
SSBP3-212ENST00000528930 SLC27A5Q9Y2P5 690 aa9.94□□□□□ -0.82
SSBP3-212ENST00000528930 NEDD4P46934 1319 aa9.93□□□□□ -0.82
SSBP3-212ENST00000528930 RAD50Q92878 1312 aa9.93□□□□□ -0.82
SSBP3-212ENST00000528930 FRYLO94915 3013 aa9.93□□□□□ -0.82
SSBP3-212ENST00000528930 CABYRO75952 493 aa9.93□□□□□ -0.82
SSBP3-212ENST00000528930 EYA4O95677 639 aa9.93□□□□□ -0.82
SSBP3-212ENST00000528930 SNAI1O95863 264 aaPredicted RBP9.93□□□□□ -0.82
SSBP3-212ENST00000528930 BMP3P12645 472 aa9.93□□□□□ -0.82
SSBP3-212ENST00000528930 MCCP23508 829 aa9.93□□□□□ -0.82
SSBP3-212ENST00000528930 STAT3P40763 770 aa9.93□□□□□ -0.82
SSBP3-212ENST00000528930 KCNJ6P48051 423 aa9.93□□□□□ -0.82
SSBP3-212ENST00000528930 ATXN1P54253 815 aaKnown RBP9.93□□□□□ -0.82
SSBP3-212ENST00000528930 DEFB103AP81534 67 aa9.93□□□□□ -0.82
SSBP3-212ENST00000528930 RCSD1Q6JBY9 416 aa9.93□□□□□ -0.82
SSBP3-212ENST00000528930 CXCL17Q6UXB2 119 aa9.93□□□□□ -0.82
SSBP3-212ENST00000528930 RASGRP2Q7LDG7 609 aa9.93□□□□□ -0.82
SSBP3-212ENST00000528930 NCAPG2Q86XI2 1143 aa9.93□□□□□ -0.82
SSBP3-212ENST00000528930 GMCL1Q96IK5 515 aa9.93□□□□□ -0.82
SSBP3-212ENST00000528930 RAD9AQ99638 391 aa9.93□□□□□ -0.82
SSBP3-212ENST00000528930 TMEM47Q9BQJ4 181 aa9.93□□□□□ -0.82
SSBP3-212ENST00000528930 RNF41Q9H4P4 317 aaPredicted RBP9.93□□□□□ -0.82
SSBP3-212ENST00000528930 SPC25Q9HBM1 224 aa9.93□□□□□ -0.82
SSBP3-212ENST00000528930 TOMM22Q9NS69 142 aa9.93□□□□□ -0.82
SSBP3-212ENST00000528930 CD207Q9UJ71 328 aa9.93□□□□□ -0.82
SSBP3-212ENST00000528930 FEM1BQ9UK73 627 aa9.93□□□□□ -0.82
SSBP3-212ENST00000528930 RIPK3Q9Y572 518 aa9.93□□□□□ -0.82
SSBP3-212ENST00000528930 COL4A3Q01955 1670 aa9.93□□□□□ -0.82
SSBP3-212ENST00000528930 TTC24A2A3L6 582 aaPredicted RBP9.92□□□□□ -0.82
SSBP3-212ENST00000528930 TMEM232C9JQI7 657 aa9.92□□□□□ -0.82
SSBP3-212ENST00000528930 ATP2A1O14983 1001 aa9.92□□□□□ -0.82
SSBP3-212ENST00000528930 SGSM2O43147 1006 aa9.92□□□□□ -0.82
SSBP3-212ENST00000528930 PLA2G6O60733 806 aa9.92□□□□□ -0.82
SSBP3-212ENST00000528930 SLC25A27O95847 323 aa9.92□□□□□ -0.82
SSBP3-212ENST00000528930 PGK2P07205 417 aa9.92□□□□□ -0.82
SSBP3-212ENST00000528930 SDHBP21912 280 aa9.92□□□□□ -0.82
SSBP3-212ENST00000528930 PTH1RQ03431 593 aa9.92□□□□□ -0.82
SSBP3-212ENST00000528930 IMMTQ16891 758 aaKnown RBP9.92□□□□□ -0.82
SSBP3-212ENST00000528930 MAMDC4Q6UXC1 1216 aa9.92□□□□□ -0.82
SSBP3-212ENST00000528930 KIFC2Q96AC6 838 aa9.92□□□□□ -0.82
SSBP3-212ENST00000528930 MSLNLQ96KJ4 702 aa9.92□□□□□ -0.82
SSBP3-212ENST00000528930 SLC38A10Q9HBR0 1119 aa9.92□□□□□ -0.82
SSBP3-212ENST00000528930 SPEGQ15772 3267 aa9.92□□□□□ -0.82
SSBP3-212ENST00000528930 H3BNC9 293 aa9.91□□□□□ -0.82
SSBP3-212ENST00000528930 ZBED4O75132 1171 aa9.91□□□□□ -0.82
SSBP3-212ENST00000528930 TOP1P11387 765 aaKnown RBP9.91□□□□□ -0.82
SSBP3-212ENST00000528930 SLC1A4P43007 532 aa9.91□□□□□ -0.82
SSBP3-212ENST00000528930 NT5C2P49902 561 aa9.91□□□□□ -0.82
SSBP3-212ENST00000528930 STAT2P52630 851 aa9.91□□□□□ -0.82
SSBP3-212ENST00000528930 DMWDQ09019 674 aa9.91□□□□□ -0.82
SSBP3-212ENST00000528930 KCTD1Q719H9 257 aa9.91□□□□□ -0.82
SSBP3-212ENST00000528930 CHURC1Q8WUH1 139 aa9.91□□□□□ -0.82
SSBP3-212ENST00000528930 RUFY2Q8WXA3 655 aa9.91□□□□□ -0.82
SSBP3-212ENST00000528930 ESR2Q92731 530 aa9.91□□□□□ -0.82
SSBP3-212ENST00000528930 CHMP4CQ96CF2 233 aa9.91□□□□□ -0.82
SSBP3-212ENST00000528930 TTC14Q96N46 770 aa9.91□□□□□ -0.82
SSBP3-212ENST00000528930 MMP19Q99542 508 aa9.91□□□□□ -0.82
SSBP3-212ENST00000528930 ZKSCAN3Q9BRR0 538 aa9.91□□□□□ -0.82
SSBP3-212ENST00000528930 TEX13BQ9BXU2 312 aa9.91□□□□□ -0.82
SSBP3-212ENST00000528930 ALDH8A1Q9H2A2 487 aaPredicted RBP9.91□□□□□ -0.82
SSBP3-212ENST00000528930 ZSWIM5Q9P217 1185 aa9.91□□□□□ -0.82
SSBP3-212ENST00000528930 ASTN1O14525 1302 aa9.9□□□□□ -0.82
SSBP3-212ENST00000528930 B4E1Z4 1266 aa9.9□□□□□ -0.82
SSBP3-212ENST00000528930 CYP21A2P08686 494 aa9.9□□□□□ -0.82
SSBP3-212ENST00000528930 IQCF3P0C7M6 154 aa9.9□□□□□ -0.82
SSBP3-212ENST00000528930 SNHG28P0DPA3 235 aa9.9□□□□□ -0.82
SSBP3-212ENST00000528930 FDX1P10109 184 aa9.9□□□□□ -0.82
SSBP3-212ENST00000528930 CYP2C9P11712 490 aa9.9□□□□□ -0.82
SSBP3-212ENST00000528930 COPB2P35606 906 aa9.9□□□□□ -0.82
SSBP3-212ENST00000528930 OAZ1P54368 228 aa9.9□□□□□ -0.82
SSBP3-212ENST00000528930 BEX3Q00994 111 aa9.9□□□□□ -0.82
SSBP3-212ENST00000528930 HYAL1Q12794 435 aa9.9□□□□□ -0.82
SSBP3-212ENST00000528930 NFX1Q12986 1120 aaKnown RBP9.9□□□□□ -0.82
SSBP3-212ENST00000528930 HIC1Q14526 733 aa9.9□□□□□ -0.82
SSBP3-212ENST00000528930 SNRNP48Q6IEG0 339 aaKnown RBP9.9□□□□□ -0.82
SSBP3-212ENST00000528930 BTNL9Q6UXG8 535 aa9.9□□□□□ -0.82
SSBP3-212ENST00000528930 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.9□□□□□ -0.82
SSBP3-212ENST00000528930 FAM160B2Q86V87 743 aa9.9□□□□□ -0.82
SSBP3-212ENST00000528930 DGKHQ86XP1 1220 aa9.9□□□□□ -0.82
SSBP3-212ENST00000528930 CPXCR1Q8N123 301 aa9.9□□□□□ -0.82
SSBP3-212ENST00000528930 SMRP1Q8NCR6 262 aa9.9□□□□□ -0.82
SSBP3-212ENST00000528930 DCAF4Q8WV16 495 aa9.9□□□□□ -0.82
SSBP3-212ENST00000528930 RUBCNQ92622 972 aa9.9□□□□□ -0.82
SSBP3-212ENST00000528930 MAP4K1Q92918 833 aa9.9□□□□□ -0.82
SSBP3-212ENST00000528930 SAMD11Q96NU1 681 aa9.9□□□□□ -0.82
SSBP3-212ENST00000528930 RAVER2Q9HCJ3 691 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms