RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 ZC3H3Q8IXZ2 948 aaKnown RBP16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 NDST4Q9H3R1 872 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 RPAP3Q9H6T3 665 aaPredicted RBP16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 ADGRG1Q9Y653 693 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 MYPNQ86TC9 1320 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 TRAF5O00463 557 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 CALUO43852 315 aaPredicted RBP16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 TBCAO75347 108 aaKnown RBP16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 PABPC4Q13310 644 aaKnown RBP eCLIP16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 MIIPQ5JXC2 388 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 TRIM65Q6PJ69 517 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 LRRC55Q6ZSA7 311 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 STXBP4Q6ZWJ1 553 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 HPS3Q969F9 1004 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 L2HGDHQ9H9P8 463 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 OLFML3Q9NRN5 406 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 TBC1D22BQ9NU19 505 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 TRAF3IP3Q9Y228 551 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 UBIAD1Q9Y5Z9 338 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 RBBP6Q7Z6E9 1792 aaKnown RBP16.35■□□□□ 0.21
ECHDC1-220ENST00000528402 TTC26A0AVF1 554 aa16.35■□□□□ 0.21
ECHDC1-220ENST00000528402 IPO5O00410 1097 aaKnown RBP16.35■□□□□ 0.21
ECHDC1-220ENST00000528402 EML1O00423 815 aa16.35■□□□□ 0.21
ECHDC1-220ENST00000528402 VWA5AO00534 786 aa16.35■□□□□ 0.21
ECHDC1-220ENST00000528402 PDXKO00764 312 aa16.35■□□□□ 0.21
ECHDC1-220ENST00000528402 ATP2A1O14983 1001 aa16.35■□□□□ 0.21
ECHDC1-220ENST00000528402 CETN3O15182 167 aa16.35■□□□□ 0.21
ECHDC1-220ENST00000528402 MAFGO15525 162 aa16.35■□□□□ 0.21
ECHDC1-220ENST00000528402 ALAS1P13196 640 aa16.35■□□□□ 0.21
ECHDC1-220ENST00000528402 TRIM21P19474 475 aaKnown RBP16.35■□□□□ 0.21
ECHDC1-220ENST00000528402 RPL13P26373 211 aaKnown RBP16.35■□□□□ 0.21
ECHDC1-220ENST00000528402 TUBB2AQ13885 445 aa16.35■□□□□ 0.21
ECHDC1-220ENST00000528402 BMT2Q1RMZ1 405 aa16.35■□□□□ 0.21
ECHDC1-220ENST00000528402 SYT10Q6XYQ8 523 aa16.35■□□□□ 0.21
ECHDC1-220ENST00000528402 CCDC170Q8IYT3 715 aa16.35■□□□□ 0.21
ECHDC1-220ENST00000528402 KLRG1Q96E93 195 aa16.35■□□□□ 0.21
ECHDC1-220ENST00000528402 WRNIP1Q96S55 665 aa16.35■□□□□ 0.21
ECHDC1-220ENST00000528402 TUBB2BQ9BVA1 445 aa16.35■□□□□ 0.21
ECHDC1-220ENST00000528402 JADE2Q9NQC1 790 aa16.35■□□□□ 0.21
ECHDC1-220ENST00000528402 MYO1AQ9UBC5 1043 aa16.35■□□□□ 0.21
ECHDC1-220ENST00000528402 ODF2LQ9ULJ1 636 aa16.35■□□□□ 0.21
ECHDC1-220ENST00000528402 ADAMTS5Q9UNA0 930 aa16.35■□□□□ 0.21
ECHDC1-220ENST00000528402 EIF3DO15371 548 aaKnown RBP eCLIP16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 TAL1P17542 331 aaPredicted RBP16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 DSG3P32926 999 aa16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 PSMC6P62333 389 aa16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 COG2Q14746 738 aa16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 MEA1Q16626 185 aa16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 KNOP1Q1ED39 458 aaKnown RBP16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 RINT1Q6NUQ1 792 aa16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 RAD9BQ6WBX8 426 aa16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 TOGARAM2Q6ZUX3 1019 aa16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 EPM2AIP1Q7L775 607 aaPredicted RBP16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 TPH2Q8IWU9 490 aa16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 CPXCR1Q8N123 301 aa16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 RBM46Q8TBY0 533 aaKnown RBP16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 SYTL5Q8TDW5 730 aaPredicted RBP16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 SCFD1Q8WVM8 642 aa16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 DYDC2Q96IM9 177 aa16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 PCMTD1Q96MG8 357 aaPredicted RBP16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 TRERF1Q96PN7 1200 aa16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 TTYH3Q9C0H2 523 aa16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 NUCKS1Q9H1E3 243 aaKnown RBP16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 BHMT2Q9H2M3 363 aa16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 KCTD10Q9H3F6 313 aa16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 SPON1Q9HCB6 807 aa16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 RAVER2Q9HCJ3 691 aaKnown RBP16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 HOXC10Q9NYD6 342 aa16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 TMOD4Q9NZQ9 345 aa16.34■□□□□ 0.21
ECHDC1-220ENST00000528402 UBE4BO95155 1302 aa16.33■□□□□ 0.21
ECHDC1-220ENST00000528402 SOWAHDA6NJG2 315 aa16.33■□□□□ 0.2
ECHDC1-220ENST00000528402 SLU7O95391 586 aaKnown RBP16.33■□□□□ 0.2
ECHDC1-220ENST00000528402 P4HBP07237 508 aaKnown RBP16.33■□□□□ 0.2
ECHDC1-220ENST00000528402 ARP10275 920 aa16.33■□□□□ 0.2
ECHDC1-220ENST00000528402 CASQ1P31415 396 aa16.33■□□□□ 0.2
ECHDC1-220ENST00000528402 CYLC1P35663 651 aaPredicted RBP16.33■□□□□ 0.2
ECHDC1-220ENST00000528402 KRT83P78385 493 aa16.33■□□□□ 0.2
ECHDC1-220ENST00000528402 LRRC41Q15345 812 aa16.33■□□□□ 0.2
ECHDC1-220ENST00000528402 CCDC40Q4G0X9 1142 aa16.33■□□□□ 0.2
ECHDC1-220ENST00000528402 RNF207Q6ZRF8 634 aa16.33■□□□□ 0.2
ECHDC1-220ENST00000528402 ZNF662Q6ZS27 426 aa16.33■□□□□ 0.2
ECHDC1-220ENST00000528402 C1orf186Q6ZWK4 172 aa16.33■□□□□ 0.2
ECHDC1-220ENST00000528402 ERO1AQ96HE7 468 aa16.33■□□□□ 0.2
ECHDC1-220ENST00000528402 REEP2Q9BRK0 252 aa16.33■□□□□ 0.2
ECHDC1-220ENST00000528402 DNAI1Q9UI46 699 aa16.33■□□□□ 0.2
ECHDC1-220ENST00000528402 PARP14Q460N5 1801 aa16.33■□□□□ 0.2
ECHDC1-220ENST00000528402 ASTN2O75129 1339 aaPredicted RBP16.32■□□□□ 0.2
ECHDC1-220ENST00000528402 NFIBO00712 420 aa16.32■□□□□ 0.2
ECHDC1-220ENST00000528402 KIF5CO60282 957 aa16.32■□□□□ 0.2
ECHDC1-220ENST00000528402 FAM13AO94988 1023 aa16.32■□□□□ 0.2
ECHDC1-220ENST00000528402 LYPLA2O95372 231 aa16.32■□□□□ 0.2
ECHDC1-220ENST00000528402 ITGB5P18084 799 aa16.32■□□□□ 0.2
ECHDC1-220ENST00000528402 HNRNPH3P31942 346 aaKnown RBP16.32■□□□□ 0.2
ECHDC1-220ENST00000528402 CYP4A11Q02928 519 aa16.32■□□□□ 0.2
ECHDC1-220ENST00000528402 ADAM9Q13443 819 aa16.32■□□□□ 0.2
ECHDC1-220ENST00000528402 NFIL3Q16649 462 aa16.32■□□□□ 0.2
ECHDC1-220ENST00000528402 SH3D19Q5HYK7 790 aa16.32■□□□□ 0.2
ECHDC1-220ENST00000528402 MIER3Q7Z3K6 550 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms