RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 KLHL30Q0D2K2 578 aa8.21□□□□□ -1.09
C11orf54-207ENST00000528288 PDIA5Q14554 519 aa8.21□□□□□ -1.09
C11orf54-207ENST00000528288 MAP9Q49MG5 647 aa8.21□□□□□ -1.09
C11orf54-207ENST00000528288 APOBEC3HQ6NTF7 200 aaKnown RBP8.21□□□□□ -1.09
C11orf54-207ENST00000528288 SFR1Q86XK3 245 aa8.21□□□□□ -1.09
C11orf54-207ENST00000528288 CATSPER3Q86XQ3 398 aa8.21□□□□□ -1.09
C11orf54-207ENST00000528288 TBC1D22AQ8WUA7 517 aa8.21□□□□□ -1.09
C11orf54-207ENST00000528288 ZNF622Q969S3 477 aaKnown RBP eCLIP8.21□□□□□ -1.09
C11orf54-207ENST00000528288 NOX5Q96PH1 765 aa8.21□□□□□ -1.09
C11orf54-207ENST00000528288 KRT12Q99456 494 aa8.21□□□□□ -1.09
C11orf54-207ENST00000528288 TSGA10Q9BZW7 698 aa8.21□□□□□ -1.09
C11orf54-207ENST00000528288 ACBD3Q9H3P7 528 aa8.21□□□□□ -1.09
C11orf54-207ENST00000528288 RRP15Q9Y3B9 282 aaKnown RBP8.21□□□□□ -1.09
C11orf54-207ENST00000528288 IGKV6D-41A0A0C4DH26 115 aa8.21□□□□□ -1.1
C11orf54-207ENST00000528288 ANO9A1A5B4 782 aa8.21□□□□□ -1.1
C11orf54-207ENST00000528288 TMCO5BA8MYB1 307 aa8.21□□□□□ -1.1
C11orf54-207ENST00000528288 MYO1CO00159 1063 aa8.21□□□□□ -1.1
C11orf54-207ENST00000528288 BBOX1O75936 387 aa8.21□□□□□ -1.1
C11orf54-207ENST00000528288 SNHG28P0DPA3 235 aa8.21□□□□□ -1.1
C11orf54-207ENST00000528288 ATP1A2P50993 1020 aa8.21□□□□□ -1.1
C11orf54-207ENST00000528288 JAG1P78504 1218 aa8.21□□□□□ -1.1
C11orf54-207ENST00000528288 GUCY2DQ02846 1103 aa8.21□□□□□ -1.1
C11orf54-207ENST00000528288 KCNH2Q12809 1159 aa8.21□□□□□ -1.1
C11orf54-207ENST00000528288 PLS1Q14651 629 aa8.21□□□□□ -1.1
C11orf54-207ENST00000528288 ASTE1Q2TB18 679 aaPredicted RBP8.21□□□□□ -1.1
C11orf54-207ENST00000528288 SLC9C1Q4G0N8 1177 aa8.21□□□□□ -1.1
C11orf54-207ENST00000528288 ZCWPW2Q504Y3 356 aa8.21□□□□□ -1.1
C11orf54-207ENST00000528288 FIGNQ5HY92 759 aa8.21□□□□□ -1.1
C11orf54-207ENST00000528288 SLFN13Q68D06 897 aa8.21□□□□□ -1.1
C11orf54-207ENST00000528288 C8orf74Q6P047 294 aa8.21□□□□□ -1.1
C11orf54-207ENST00000528288 FEZ2Q9UHY8 353 aaPredicted RBP8.21□□□□□ -1.1
C11orf54-207ENST00000528288 AJAP1Q9UKB5 411 aaPredicted RBP8.21□□□□□ -1.1
C11orf54-207ENST00000528288 FGFR1OPO95684 399 aaKnown RBP8.21□□□□□ -1.1
C11orf54-207ENST00000528288 NOP2P46087 812 aaKnown RBP8.21□□□□□ -1.1
C11orf54-207ENST00000528288 CLK2P49760 499 aaKnown RBP8.21□□□□□ -1.1
C11orf54-207ENST00000528288 CCDC65Q8IXS2 484 aa8.21□□□□□ -1.1
C11orf54-207ENST00000528288 SEPT12Q8IYM1 358 aa8.21□□□□□ -1.1
C11orf54-207ENST00000528288 FAM163AQ96GL9 167 aaPredicted RBP8.21□□□□□ -1.1
C11orf54-207ENST00000528288 EPB41L5Q9HCM4 733 aa8.21□□□□□ -1.1
C11orf54-207ENST00000528288 TMEM51Q9NW97 253 aa8.21□□□□□ -1.1
C11orf54-207ENST00000528288 PCDHB13Q9Y5F0 798 aa8.21□□□□□ -1.1
C11orf54-207ENST00000528288 CDK5RAP2Q96SN8 1893 aa8.21□□□□□ -1.1
C11orf54-207ENST00000528288 MAST2Q6P0Q8 1798 aa8.21□□□□□ -1.1
C11orf54-207ENST00000528288 GOLGA6CA6NDK9 693 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 FAM86B1E9PN63 330 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 TOM1O60784 492 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 FAM86B2P0C5J1 330 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 GOLGA6DP0CG33 693 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 HNRNPH3P31942 346 aaKnown RBP8.2□□□□□ -1.1
C11orf54-207ENST00000528288 PAFAH1B1P43034 410 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 CDK17Q00537 523 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 TBC1D10BQ4KMP7 808 aaPredicted RBP8.2□□□□□ -1.1
C11orf54-207ENST00000528288 PPP4R3AQ6IN85 833 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 CCDC70Q6NSX1 233 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 GOLGA6AQ9NYA3 693 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 MYH7BA7E2Y1 1941 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 POLRMTO00411 1230 aaKnown RBP8.2□□□□□ -1.1
C11orf54-207ENST00000528288 KRT14P02533 472 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 HLA-DOAP06340 250 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 PTK2Q05397 1052 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 CTTNQ14247 550 aaKnown RBP8.2□□□□□ -1.1
C11orf54-207ENST00000528288 ZYXQ15942 572 aaKnown RBP8.2□□□□□ -1.1
C11orf54-207ENST00000528288 C15orf52Q6ZUT6 534 aaKnown RBP8.2□□□□□ -1.1
C11orf54-207ENST00000528288 AENQ8WTP8 325 aaKnown RBP8.2□□□□□ -1.1
C11orf54-207ENST00000528288 REEP2Q9BRK0 252 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 AP1M1Q9BXS5 423 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 CENPHQ9H3R5 247 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 MED4Q9NPJ6 270 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 PKD2L1Q9P0L9 805 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 SCAF8Q9UPN6 1271 aaKnown RBP8.2□□□□□ -1.1
C11orf54-207ENST00000528288 PCDHA2Q9Y5H9 948 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 TARSL2A2RTX5 802 aaKnown RBP8.2□□□□□ -1.1
C11orf54-207ENST00000528288 CRKP46108 304 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 TUBB4BP68371 445 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 CERKLQ49MI3 558 aaPredicted RBP8.2□□□□□ -1.1
C11orf54-207ENST00000528288 MAEAQ7L5Y9 396 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 DDX42Q86XP3 938 aaKnown RBP eCLIP8.2□□□□□ -1.1
C11orf54-207ENST00000528288 FNBP4Q8N3X1 1017 aaPredicted RBP8.2□□□□□ -1.1
C11orf54-207ENST00000528288 BHMT2Q9H2M3 363 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 DHX36Q9H2U1 1008 aaKnown RBP8.2□□□□□ -1.1
C11orf54-207ENST00000528288 PSD3Q9NYI0 1048 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 CEP72Q9P209 647 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 HDAC9Q9UKV0 1011 aa8.2□□□□□ -1.1
C11orf54-207ENST00000528288 TULP2O00295 520 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 MEIS2O14770 477 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 HEXIM1O94992 359 aaKnown RBP8.19□□□□□ -1.1
C11orf54-207ENST00000528288 SMARCA1P28370 1054 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 HOXD13P35453 343 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 PPP1R2P41236 205 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 NOVP48745 357 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 ARHGAP4P98171 946 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 ASIC2Q16515 512 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 ZC2HC1CQ53FD0 456 aaPredicted RBP8.19□□□□□ -1.1
C11orf54-207ENST00000528288 MUM1L1Q5H9M0 696 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 SH3BP5LQ7L8J4 393 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 TRIM59Q8IWR1 403 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 MMGT1Q8N4V1 131 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 RDH13Q8NBN7 331 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 CERKQ8TCT0 537 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 TEKT1Q969V4 418 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms