RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	PCDHAC2	Q9Y5I4	1007 aa		11.3	□□□□□ -0.6
PGAP2-231	ENST00000528216	CNTNAP1	P78357	1384 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	TRAF5	O00463	557 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	PDXK	O00764	312 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	CALU	O43852	315 aa	Predicted RBP	11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	SSB	P05455	408 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	FDX1	P10109	184 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	MCM3	P25205	808 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	RPL13	P26373	211 aa	Known RBP	11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	CAP2	P40123	477 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	VAV2	P52735	878 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	CKAP4	Q07065	602 aa	Known RBP	11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	PPP2R5C	Q13362	524 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	TNFAIP1	Q13829	316 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	NAA30	Q147X3	362 aa	Predicted RBP	11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	NFIL3	Q16649	462 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	CCDC40	Q4G0X9	1142 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	STXBP4	Q6ZWJ1	553 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	NIPA1	Q7RTP0	329 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	FRMD5	Q7Z6J6	570 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	CATSPER3	Q86XQ3	398 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	GPC2	Q8N158	579 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	SLC35F6	Q8N357	371 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	LPAR1	Q92633	364 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	CCDC42	Q96M95	316 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	GBP3	Q9H0R5	595 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	METTL14	Q9HCE5	456 aa	Known RBP	11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	OLFML3	Q9NRN5	406 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	CEP72	Q9P209	647 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	VAV3	Q9UKW4	847 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	MYO6	Q9UM54	1294 aa		11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.29	□□□□□ -0.6
PGAP2-231	ENST00000528216		A0A1W2PRG0	241 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	CCDC151	A5D8V7	595 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	RASSF10	A6NK89	507 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216		E9PMD0	336 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	EIF3D	O15371	548 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	SLC16A3	O15427	465 aa	Known RBP	11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	MED24	O75448	989 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	RPS12	P25398	132 aa	Known RBP	11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	ANXA13	P27216	316 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	GHRHR	Q02643	423 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	GABPB1	Q06547	395 aa	Predicted RBP	11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	KIF5A	Q12840	1032 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	USH1G	Q495M9	461 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	CCDC122	Q5T0U0	273 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	IQCE	Q6IPM2	695 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	TRIM59	Q8IWR1	403 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	MSL3	Q8N5Y2	521 aa	Known RBP	11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	SLC5A5	Q92911	643 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	JAKMIP2	Q96AA8	810 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	PURB	Q96QR8	312 aa	Known RBP	11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	KCTD10	Q9H3F6	313 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	CTAGE15	A4D2H0	777 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	TCP10L2	B9ZVM9	353 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	FAM86B1	E9PN63	330 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	OPLAH	O14841	1288 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	MSH4	O15457	936 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	ERLIN1	O75477	346 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	FAM86B2	P0C5J1	330 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	CTAGE8	P0CG41	777 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	SPATA31C1	P0DKV0	1188 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	BCR	P11274	1271 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	GIT2	Q14161	759 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	PAPD7	Q5XG87	772 aa	Known RBP	11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	NCAPH2	Q6IBW4	605 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	CTAGE6	Q86UF2	777 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	MCF2L2	Q86YR7	1114 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	FMNL3	Q8IVF7	1028 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	CTAGE4	Q8IX94	777 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	CCDC155	Q8N6L0	562 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	TRIM58	Q8NG06	486 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	MAF1	Q9H063	256 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	RRAGC	Q9HB90	399 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	ARFGAP3	Q9NP61	516 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	AGPAT5	Q9NUQ2	364 aa		11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	REXO2	Q9Y3B8	237 aa	Known RBP	11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216		V9GYY5	206 aa	Predicted RBP	11.28	□□□□□ -0.6
PGAP2-231	ENST00000528216	ATP8B3	O60423	1300 aa		11.27	□□□□□ -0.6
PGAP2-231	ENST00000528216	IGLV3-22	A0A075B6J6	115 aa		11.27	□□□□□ -0.61
PGAP2-231	ENST00000528216	TBCA	O75347	108 aa	Known RBP	11.27	□□□□□ -0.61
PGAP2-231	ENST00000528216	PRLR	P16471	622 aa		11.27	□□□□□ -0.61
PGAP2-231	ENST00000528216	GMPS	P49915	693 aa	Predicted RBP	11.27	□□□□□ -0.61
PGAP2-231	ENST00000528216	CLCN6	P51797	869 aa		11.27	□□□□□ -0.61
PGAP2-231	ENST00000528216	HERVK_113	P62684	666 aa		11.27	□□□□□ -0.61
PGAP2-231	ENST00000528216	KNOP1	Q1ED39	458 aa	Known RBP	11.27	□□□□□ -0.61
PGAP2-231	ENST00000528216	ARSH	Q5FYA8	562 aa		11.27	□□□□□ -0.61
PGAP2-231	ENST00000528216	CACNA2D4	Q7Z3S7	1137 aa		11.27	□□□□□ -0.61
PGAP2-231	ENST00000528216	MSANTD4	Q8NCY6	345 aa		11.27	□□□□□ -0.61
PGAP2-231	ENST00000528216	SCFD1	Q8WVM8	642 aa		11.27	□□□□□ -0.61
PGAP2-231	ENST00000528216	RUBCN	Q92622	972 aa		11.27	□□□□□ -0.61
PGAP2-231	ENST00000528216	HPS3	Q969F9	1004 aa		11.27	□□□□□ -0.61
PGAP2-231	ENST00000528216	RIT2	Q99578	217 aa		11.27	□□□□□ -0.61
PGAP2-231	ENST00000528216	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.27	□□□□□ -0.61
PGAP2-231	ENST00000528216	MMRN2	Q9H8L6	949 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms