RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 PBX4Q9BYU1 374 aa17.72■□□□□ 0.43
CAPN1-213ENST00000527897 ZMYND12Q9H0C1 365 aa17.72■□□□□ 0.43
CAPN1-213ENST00000527897 RNPEPQ9H4A4 650 aa17.72■□□□□ 0.43
CAPN1-213ENST00000527897 SETD4Q9NVD3 440 aa17.72■□□□□ 0.43
CAPN1-213ENST00000527897 TET1Q8NFU7 2136 aa17.72■□□□□ 0.43
CAPN1-213ENST00000527897 GSTTP1A0A1W2PQM5 241 aa17.71■□□□□ 0.43
CAPN1-213ENST00000527897 ESYT2A0FGR8 921 aa17.71■□□□□ 0.43
CAPN1-213ENST00000527897 DDX39AO00148 427 aaKnown RBP17.71■□□□□ 0.43
CAPN1-213ENST00000527897 TREHO43280 583 aa17.71■□□□□ 0.43
CAPN1-213ENST00000527897 THPOP40225 353 aa17.71■□□□□ 0.43
CAPN1-213ENST00000527897 RABGGTBP53611 331 aa17.71■□□□□ 0.43
CAPN1-213ENST00000527897 NLRP5P59047 1200 aa17.71■□□□□ 0.43
CAPN1-213ENST00000527897 ZNF618Q5T7W0 954 aa17.71■□□□□ 0.43
CAPN1-213ENST00000527897 CPLX2Q6PUV4 134 aaKnown RBP17.71■□□□□ 0.43
CAPN1-213ENST00000527897 TEX2Q8IWB9 1127 aa17.71■□□□□ 0.43
CAPN1-213ENST00000527897 CCDC148Q8NFR7 591 aa17.71■□□□□ 0.43
CAPN1-213ENST00000527897 JPH1Q9HDC5 661 aaPredicted RBP17.71■□□□□ 0.43
CAPN1-213ENST00000527897 SLC9A2Q9UBY0 812 aa17.71■□□□□ 0.43
CAPN1-213ENST00000527897 MSRAQ9UJ68 235 aa17.71■□□□□ 0.43
CAPN1-213ENST00000527897 STXBP5LQ9Y2K9 1186 aa17.71■□□□□ 0.43
CAPN1-213ENST00000527897 GNAT1P11488 350 aa17.7■□□□□ 0.42
CAPN1-213ENST00000527897 ATP2A2P16615 1042 aaKnown RBP17.7■□□□□ 0.42
CAPN1-213ENST00000527897 PLA2G4DQ86XP0 818 aa17.7■□□□□ 0.42
CAPN1-213ENST00000527897 BICD2Q8TD16 824 aa17.7■□□□□ 0.42
CAPN1-213ENST00000527897 MYLIPQ8WY64 445 aa17.7■□□□□ 0.42
CAPN1-213ENST00000527897 CDX2Q99626 313 aaPredicted RBP17.7■□□□□ 0.42
CAPN1-213ENST00000527897 AGO4Q9HCK5 861 aaKnown RBP17.7■□□□□ 0.42
CAPN1-213ENST00000527897 CDH23Q9H251 3354 aa17.69■□□□□ 0.42
CAPN1-213ENST00000527897 DTNBO60941 627 aa17.69■□□□□ 0.42
CAPN1-213ENST00000527897 CTSHP09668 335 aa17.69■□□□□ 0.42
CAPN1-213ENST00000527897 TRIM71Q2Q1W2 868 aaKnown RBP17.69■□□□□ 0.42
CAPN1-213ENST00000527897 SERINC5Q86VE9 423 aa17.69■□□□□ 0.42
CAPN1-213ENST00000527897 SLKQ9H2G2 1235 aaPredicted RBP17.69■□□□□ 0.42
CAPN1-213ENST00000527897 NKX2-4Q9H2Z4 354 aa17.69■□□□□ 0.42
CAPN1-213ENST00000527897 ZNF576Q9H609 170 aa17.69■□□□□ 0.42
CAPN1-213ENST00000527897 FAM86B1E9PN63 330 aa17.68■□□□□ 0.42
CAPN1-213ENST00000527897 MEIS1O00470 390 aa17.68■□□□□ 0.42
CAPN1-213ENST00000527897 FAM86B2P0C5J1 330 aa17.68■□□□□ 0.42
CAPN1-213ENST00000527897 ANAPC15P60006 121 aa17.68■□□□□ 0.42
CAPN1-213ENST00000527897 ACTR2P61160 394 aa17.68■□□□□ 0.42
CAPN1-213ENST00000527897 IGBP1P78318 339 aa17.68■□□□□ 0.42
CAPN1-213ENST00000527897 RBL2Q08999 1139 aa17.68■□□□□ 0.42
CAPN1-213ENST00000527897 ITGB3BPQ13352 177 aaPredicted RBP17.68■□□□□ 0.42
CAPN1-213ENST00000527897 RAB30Q15771 203 aa17.68■□□□□ 0.42
CAPN1-213ENST00000527897 MCTP2Q6DN12 878 aa17.68■□□□□ 0.42
CAPN1-213ENST00000527897 LMBR1Q8WVP7 490 aa17.68■□□□□ 0.42
CAPN1-213ENST00000527897 AIFM3Q96NN9 605 aa17.68■□□□□ 0.42
CAPN1-213ENST00000527897 SMARCAD1Q9H4L7 1026 aa17.68■□□□□ 0.42
CAPN1-213ENST00000527897 AZI2Q9H6S1 392 aa17.68■□□□□ 0.42
CAPN1-213ENST00000527897 ERAP1Q9NZ08 941 aa17.68■□□□□ 0.42
CAPN1-213ENST00000527897 EYSQ5T1H1 3165 aa17.68■□□□□ 0.42
CAPN1-213ENST00000527897 TMEM265A0A087WTH1 108 aa17.67■□□□□ 0.42
CAPN1-213ENST00000527897 RSPH10B2B2RC85 870 aa17.67■□□□□ 0.42
CAPN1-213ENST00000527897 EIF5BO60841 1220 aaKnown RBP17.67■□□□□ 0.42
CAPN1-213ENST00000527897 NBNO60934 754 aa17.67■□□□□ 0.42
CAPN1-213ENST00000527897 DEXIO95424 95 aa17.67■□□□□ 0.42
CAPN1-213ENST00000527897 PARNO95453 639 aaKnown RBP17.67■□□□□ 0.42
CAPN1-213ENST00000527897 SEC24BO95487 1268 aa17.67■□□□□ 0.42
CAPN1-213ENST00000527897 RSPH10BP0C881 870 aa17.67■□□□□ 0.42
CAPN1-213ENST00000527897 MYOGP15173 224 aa17.67■□□□□ 0.42
CAPN1-213ENST00000527897 KCNJ6P48051 423 aa17.67■□□□□ 0.42
CAPN1-213ENST00000527897 AK2P54819 239 aa17.67■□□□□ 0.42
CAPN1-213ENST00000527897 SCRN1Q12765 414 aa17.67■□□□□ 0.42
CAPN1-213ENST00000527897 PPFIA1Q13136 1202 aa17.67■□□□□ 0.42
CAPN1-213ENST00000527897 GPNMBQ14956 572 aa17.67■□□□□ 0.42
CAPN1-213ENST00000527897 GRIN2CQ14957 1233 aa17.67■□□□□ 0.42
CAPN1-213ENST00000527897 SLC28A3Q9HAS3 691 aa17.67■□□□□ 0.42
CAPN1-213ENST00000527897 SH3GLB2Q9NR46 395 aa17.67■□□□□ 0.42
CAPN1-213ENST00000527897 TPCN1Q9ULQ1 816 aa17.67■□□□□ 0.42
CAPN1-213ENST00000527897 YBX2Q9Y2T7 364 aaKnown RBP17.67■□□□□ 0.42
CAPN1-213ENST00000527897 NFASCO94856 1347 aa17.67■□□□□ 0.42
CAPN1-213ENST00000527897 MYO9BQ13459 2157 aa17.66■□□□□ 0.42
CAPN1-213ENST00000527897 BACH1O14867 736 aa17.66■□□□□ 0.42
CAPN1-213ENST00000527897 CDKL5O76039 1030 aa17.66■□□□□ 0.42
CAPN1-213ENST00000527897 CYP3A4P08684 503 aa17.66■□□□□ 0.42
CAPN1-213ENST00000527897 FOSL2P15408 326 aa17.66■□□□□ 0.42
CAPN1-213ENST00000527897 HOXC8P31273 242 aa17.66■□□□□ 0.42
CAPN1-213ENST00000527897 ANKRD1Q15327 319 aa17.66■□□□□ 0.42
CAPN1-213ENST00000527897 PRR16Q569H4 304 aa17.66■□□□□ 0.42
CAPN1-213ENST00000527897 CNKSR3Q6P9H4 555 aa17.66■□□□□ 0.42
CAPN1-213ENST00000527897 NIPA1Q7RTP0 329 aa17.66■□□□□ 0.42
CAPN1-213ENST00000527897 ZNF577Q9BSK1 485 aa17.66■□□□□ 0.42
CAPN1-213ENST00000527897 TCEAL9Q9UHQ7 104 aa17.66■□□□□ 0.42
CAPN1-213ENST00000527897 TRPC6Q9Y210 931 aa17.66■□□□□ 0.42
CAPN1-213ENST00000527897 CHD9Q3L8U1 2897 aa17.66■□□□□ 0.42
CAPN1-213ENST00000527897 NRCAMQ92823 1304 aa17.66■□□□□ 0.42
CAPN1-213ENST00000527897 IPO5O00410 1097 aaKnown RBP17.65■□□□□ 0.42
CAPN1-213ENST00000527897 MBTPS1Q14703 1052 aa17.65■□□□□ 0.42
CAPN1-213ENST00000527897 GRIK4Q16099 956 aa17.65■□□□□ 0.42
CAPN1-213ENST00000527897 TRAF7Q6Q0C0 670 aa17.65■□□□□ 0.42
CAPN1-213ENST00000527897 SLC17A8Q8NDX2 589 aa17.65■□□□□ 0.42
CAPN1-213ENST00000527897 SLC9A7Q96T83 725 aa17.65■□□□□ 0.42
CAPN1-213ENST00000527897 PCYT2Q99447 389 aa17.65■□□□□ 0.42
CAPN1-213ENST00000527897 EMSYQ7Z589 1322 aa17.65■□□□□ 0.42
CAPN1-213ENST00000527897 IGLV3-22A0A075B6J6 115 aa17.64■□□□□ 0.41
CAPN1-213ENST00000527897 PFKFB2O60825 505 aa17.64■□□□□ 0.41
CAPN1-213ENST00000527897 BAIAP3O94812 1187 aa17.64■□□□□ 0.41
CAPN1-213ENST00000527897 CXCL10P02778 98 aa17.64■□□□□ 0.41
CAPN1-213ENST00000527897 STAT5BP51692 787 aa17.64■□□□□ 0.41
CAPN1-213ENST00000527897 NEK4P51957 841 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms