RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 CHRNA1P02708 482 aa18.57■□□□□ 0.56
PTPRU-210ENST00000527027 RB1P06400 928 aa18.57■□□□□ 0.56
PTPRU-210ENST00000527027 SP4Q02446 784 aa18.57■□□□□ 0.56
PTPRU-210ENST00000527027 PTH1RQ03431 593 aa18.57■□□□□ 0.56
PTPRU-210ENST00000527027 USP17L6PQ6QN14 398 aa18.57■□□□□ 0.56
PTPRU-210ENST00000527027 EP400NLQ6ZTU2 488 aa18.57■□□□□ 0.56
PTPRU-210ENST00000527027 RPAINQ86UA6 219 aa18.57■□□□□ 0.56
PTPRU-210ENST00000527027 GIMAP8Q8ND71 665 aaPredicted RBP18.57■□□□□ 0.56
PTPRU-210ENST00000527027 NCOA7Q8NI08 942 aa18.57■□□□□ 0.56
PTPRU-210ENST00000527027 SMARCC2Q8TAQ2 1214 aa18.57■□□□□ 0.56
PTPRU-210ENST00000527027 RUFY2Q8WXA3 655 aa18.57■□□□□ 0.56
PTPRU-210ENST00000527027 CUL5Q93034 780 aa18.57■□□□□ 0.56
PTPRU-210ENST00000527027 E7EWF7 191 aa18.56■□□□□ 0.56
PTPRU-210ENST00000527027 C5orf67F2Z3F1 127 aa18.56■□□□□ 0.56
PTPRU-210ENST00000527027 MEIS2O14770 477 aa18.56■□□□□ 0.56
PTPRU-210ENST00000527027 NCK2O43639 380 aa18.56■□□□□ 0.56
PTPRU-210ENST00000527027 BMPR1AP36894 532 aa18.56■□□□□ 0.56
PTPRU-210ENST00000527027 TAF2Q6P1X5 1199 aa18.56■□□□□ 0.56
PTPRU-210ENST00000527027 NLRX1Q86UT6 975 aa18.56■□□□□ 0.56
PTPRU-210ENST00000527027 EXOC6Q8TAG9 804 aa18.56■□□□□ 0.56
PTPRU-210ENST00000527027 IGDCC4Q8TDY8 1250 aa18.56■□□□□ 0.56
PTPRU-210ENST00000527027 EHMT1Q9H9B1 1298 aa18.56■□□□□ 0.56
PTPRU-210ENST00000527027 PRKAG3Q9UGI9 489 aa18.56■□□□□ 0.56
PTPRU-210ENST00000527027 TAF6LQ9Y6J9 622 aa18.56■□□□□ 0.56
PTPRU-210ENST00000527027 COL4A6Q14031 1691 aa18.55■□□□□ 0.56
PTPRU-210ENST00000527027 POTEB3A0JP26 581 aa18.55■□□□□ 0.56
PTPRU-210ENST00000527027 PIK3CDO00329 1044 aa18.55■□□□□ 0.56
PTPRU-210ENST00000527027 GHRP10912 638 aa18.55■□□□□ 0.56
PTPRU-210ENST00000527027 GSPT1P15170 499 aaKnown RBP18.55■□□□□ 0.56
PTPRU-210ENST00000527027 SMARCA1P28370 1054 aa18.55■□□□□ 0.56
PTPRU-210ENST00000527027 CTNNB1P35222 781 aa18.55■□□□□ 0.56
PTPRU-210ENST00000527027 TTC22Q5TAA0 569 aa18.55■□□□□ 0.56
PTPRU-210ENST00000527027 POTEBQ6S5H4 581 aa18.55■□□□□ 0.56
PTPRU-210ENST00000527027 RRP36Q96EU6 259 aaKnown RBP18.55■□□□□ 0.56
PTPRU-210ENST00000527027 MAP3K14Q99558 947 aa18.55■□□□□ 0.56
PTPRU-210ENST00000527027 SPZ1Q9BXG8 430 aa18.55■□□□□ 0.56
PTPRU-210ENST00000527027 LMAN2LQ9H0V9 348 aa18.55■□□□□ 0.56
PTPRU-210ENST00000527027 CLDND1Q9NY35 253 aa18.55■□□□□ 0.56
PTPRU-210ENST00000527027 RWDD3Q9Y3V2 267 aa18.55■□□□□ 0.56
PTPRU-210ENST00000527027 SUPT16HQ9Y5B9 1047 aaKnown RBP18.55■□□□□ 0.56
PTPRU-210ENST00000527027 ENPP3O14638 875 aa18.54■□□□□ 0.56
PTPRU-210ENST00000527027 DCXO43602 365 aa18.54■□□□□ 0.56
PTPRU-210ENST00000527027 LINC00271P0C7V0 271 aa18.54■□□□□ 0.56
PTPRU-210ENST00000527027 TCF7P36402 384 aaPredicted RBP18.54■□□□□ 0.56
PTPRU-210ENST00000527027 CSPP1Q1MSJ5 1256 aa18.54■□□□□ 0.56
PTPRU-210ENST00000527027 RUFY4Q6ZNE9 571 aa18.54■□□□□ 0.56
PTPRU-210ENST00000527027 RSPH3Q86UC2 560 aa18.54■□□□□ 0.56
PTPRU-210ENST00000527027 SEPT1Q8WYJ6 367 aa18.54■□□□□ 0.56
PTPRU-210ENST00000527027 GPRASP2Q96D09 838 aa18.54■□□□□ 0.56
PTPRU-210ENST00000527027 CDHR1Q96JP9 859 aa18.54■□□□□ 0.56
PTPRU-210ENST00000527027 UIMC1Q96RL1 719 aa18.54■□□□□ 0.56
PTPRU-210ENST00000527027 C11orf84Q9BUA3 381 aaPredicted RBP18.54■□□□□ 0.56
PTPRU-210ENST00000527027 MYO7AQ13402 2215 aa18.53■□□□□ 0.56
PTPRU-210ENST00000527027 C19orf67A6NJJ6 358 aa18.53■□□□□ 0.56
PTPRU-210ENST00000527027 ATP9AO75110 1047 aa18.53■□□□□ 0.56
PTPRU-210ENST00000527027 CHMLP26374 656 aa18.53■□□□□ 0.56
PTPRU-210ENST00000527027 PDE4AP27815 886 aa18.53■□□□□ 0.56
PTPRU-210ENST00000527027 KIF5BP33176 963 aa18.53■□□□□ 0.56
PTPRU-210ENST00000527027 LTBRP36941 435 aa18.53■□□□□ 0.56
PTPRU-210ENST00000527027 ANTXR2P58335 489 aa18.53■□□□□ 0.56
PTPRU-210ENST00000527027 ZP2Q05996 745 aa18.53■□□□□ 0.56
PTPRU-210ENST00000527027 MGAT3Q09327 533 aa18.53■□□□□ 0.56
PTPRU-210ENST00000527027 LPIN1Q14693 890 aa18.53■□□□□ 0.56
PTPRU-210ENST00000527027 CTC1Q2NKJ3 1217 aa18.53■□□□□ 0.56
PTPRU-210ENST00000527027 CTCFLQ8NI51 663 aaPredicted RBP18.53■□□□□ 0.56
PTPRU-210ENST00000527027 CLP1Q92989 425 aaKnown RBP18.53■□□□□ 0.56
PTPRU-210ENST00000527027 LZTS2Q9BRK4 669 aa18.53■□□□□ 0.56
PTPRU-210ENST00000527027 ERAP1Q9NZ08 941 aa18.53■□□□□ 0.56
PTPRU-210ENST00000527027 ADGRA3Q8IWK6 1321 aa18.52■□□□□ 0.56
PTPRU-210ENST00000527027 GSTTP1A0A1W2PQM5 241 aa18.52■□□□□ 0.56
PTPRU-210ENST00000527027 GRM6O15303 877 aa18.52■□□□□ 0.56
PTPRU-210ENST00000527027 KCNA2P16389 499 aa18.52■□□□□ 0.56
PTPRU-210ENST00000527027 PPFIA1Q13136 1202 aa18.52■□□□□ 0.56
PTPRU-210ENST00000527027 ADHFE1Q8IWW8 467 aa18.52■□□□□ 0.56
PTPRU-210ENST00000527027 ZNF654Q8IZM8 581 aa18.52■□□□□ 0.56
PTPRU-210ENST00000527027 UPF3BQ9BZI7 483 aaKnown RBP18.52■□□□□ 0.56
PTPRU-210ENST00000527027 RC3H2Q9HBD1 1191 aaKnown RBP18.52■□□□□ 0.56
PTPRU-210ENST00000527027 SEC63Q9UGP8 760 aaKnown RBP18.52■□□□□ 0.56
PTPRU-210ENST00000527027 MBLAC1A4D2B0 266 aaPredicted RBP18.51■□□□□ 0.55
PTPRU-210ENST00000527027 DDAH1O94760 285 aa18.51■□□□□ 0.55
PTPRU-210ENST00000527027 ITGB5P18084 799 aa18.51■□□□□ 0.55
PTPRU-210ENST00000527027 MARK3P27448 753 aa18.51■□□□□ 0.55
PTPRU-210ENST00000527027 GNAQP50148 359 aa18.51■□□□□ 0.55
PTPRU-210ENST00000527027 HYAL1Q12794 435 aa18.51■□□□□ 0.55
PTPRU-210ENST00000527027 BTG3Q14201 252 aaPredicted RBP18.51■□□□□ 0.55
PTPRU-210ENST00000527027 GRIK4Q16099 956 aa18.51■□□□□ 0.55
PTPRU-210ENST00000527027 FBXO47Q5MNV8 452 aa18.51■□□□□ 0.55
PTPRU-210ENST00000527027 MB21D2Q8IYB1 491 aaPredicted RBP18.51■□□□□ 0.55
PTPRU-210ENST00000527027 DNAJB3Q8WWF6 145 aa18.51■□□□□ 0.55
PTPRU-210ENST00000527027 GLG1Q92896 1179 aa18.51■□□□□ 0.55
PTPRU-210ENST00000527027 ZNF689Q96CS4 500 aaPredicted RBP18.51■□□□□ 0.55
PTPRU-210ENST00000527027 MYL10Q9BUA6 226 aa18.51■□□□□ 0.55
PTPRU-210ENST00000527027 PSTPIP2Q9H939 334 aa18.51■□□□□ 0.55
PTPRU-210ENST00000527027 LY9Q9HBG7 655 aa18.51■□□□□ 0.55
PTPRU-210ENST00000527027 TUBE1Q9UJT0 475 aa18.51■□□□□ 0.55
PTPRU-210ENST00000527027 TRIOO75962 3097 aa18.51■□□□□ 0.55
PTPRU-210ENST00000527027 SGSM2O43147 1006 aa18.5■□□□□ 0.55
PTPRU-210ENST00000527027 MARCH8Q5T0T0 291 aa18.5■□□□□ 0.55
PTPRU-210ENST00000527027 MAP4K1Q92918 833 aa18.5■□□□□ 0.55
PTPRU-210ENST00000527027 PLVAPQ9BX97 442 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms