RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 BMP15O95972 392 aa23.43■■□□□ 1.34
CD44-222ENST00000526025 LGALS2P05162 132 aa23.43■■□□□ 1.34
CD44-222ENST00000526025 MYL3P08590 195 aa23.43■■□□□ 1.34
CD44-222ENST00000526025 TCF7P36402 384 aaPredicted RBP23.43■■□□□ 1.34
CD44-222ENST00000526025 RGS19P49795 217 aa23.43■■□□□ 1.34
CD44-222ENST00000526025 JAK3P52333 1124 aa23.43■■□□□ 1.34
CD44-222ENST00000526025 SNX17Q15036 470 aa23.43■■□□□ 1.34
CD44-222ENST00000526025 ZNF174Q15697 407 aa23.43■■□□□ 1.34
CD44-222ENST00000526025 CXCL17Q6UXB2 119 aa23.43■■□□□ 1.34
CD44-222ENST00000526025 VAV3Q9UKW4 847 aa23.43■■□□□ 1.34
CD44-222ENST00000526025 PCDHB6Q9Y5E3 794 aa23.43■■□□□ 1.34
CD44-222ENST00000526025 ALPK3Q96L96 1907 aa23.42■■□□□ 1.34
CD44-222ENST00000526025 IGKV6D-21A0A0A0MT36 114 aa23.42■■□□□ 1.34
CD44-222ENST00000526025 WDR64B1ANS9 1081 aa23.42■■□□□ 1.34
CD44-222ENST00000526025 MARCH6O60337 910 aa23.42■■□□□ 1.34
CD44-222ENST00000526025 SORBS3O60504 671 aa23.42■■□□□ 1.34
CD44-222ENST00000526025 ABHD15Q6UXT9 468 aa23.42■■□□□ 1.34
CD44-222ENST00000526025 C4orf32Q8N8J7 132 aa23.42■■□□□ 1.34
CD44-222ENST00000526025 C16orf70Q9BSU1 422 aa23.42■■□□□ 1.34
CD44-222ENST00000526025 SENP6Q9GZR1 1112 aaPredicted RBP23.42■■□□□ 1.34
CD44-222ENST00000526025 STARD7Q9NQZ5 370 aa23.42■■□□□ 1.34
CD44-222ENST00000526025 TSHZ2Q9NRE2 1034 aa23.42■■□□□ 1.34
CD44-222ENST00000526025 KAT6AQ92794 2004 aa23.42■■□□□ 1.34
CD44-222ENST00000526025 BRD1O95696 1058 aa23.41■■□□□ 1.34
CD44-222ENST00000526025 F13A1P00488 732 aa23.41■■□□□ 1.34
CD44-222ENST00000526025 OR52Z1P0C646 297 aa23.41■■□□□ 1.34
CD44-222ENST00000526025 SUPT20HL2P0C7V6 817 aa23.41■■□□□ 1.34
CD44-222ENST00000526025 PRPHP41219 470 aa23.41■■□□□ 1.34
CD44-222ENST00000526025 SP4Q02446 784 aa23.41■■□□□ 1.34
CD44-222ENST00000526025 MIS18BP1Q6P0N0 1132 aa23.41■■□□□ 1.34
CD44-222ENST00000526025 KAT2BQ92831 832 aa23.41■■□□□ 1.34
CD44-222ENST00000526025 TMEM60Q9H2L4 133 aa23.41■■□□□ 1.34
CD44-222ENST00000526025 UNC45AQ9H3U1 944 aa23.41■■□□□ 1.34
CD44-222ENST00000526025 ZNF215Q9UL58 517 aaPredicted RBP23.41■■□□□ 1.34
CD44-222ENST00000526025 TELO2Q9Y4R8 837 aa23.41■■□□□ 1.34
CD44-222ENST00000526025 PCDHA10Q9Y5I2 948 aa23.41■■□□□ 1.34
CD44-222ENST00000526025 A0A0U1RQG5 324 aaPredicted RBP23.4■■□□□ 1.34
CD44-222ENST00000526025 DDX39AO00148 427 aaKnown RBP23.4■■□□□ 1.34
CD44-222ENST00000526025 HAS3O00219 553 aa23.4■■□□□ 1.34
CD44-222ENST00000526025 DDIT3P35638 169 aa23.4■■□□□ 1.34
CD44-222ENST00000526025 SLC26A2P50443 739 aa23.4■■□□□ 1.34
CD44-222ENST00000526025 NBR1Q14596 966 aa23.4■■□□□ 1.34
CD44-222ENST00000526025 PLPPR4Q7Z2D5 763 aa23.4■■□□□ 1.34
CD44-222ENST00000526025 SLC43A3Q8NBI5 491 aa23.4■■□□□ 1.34
CD44-222ENST00000526025 AFAP1L1Q8TED9 768 aa23.4■■□□□ 1.34
CD44-222ENST00000526025 SMARCAD1Q9H4L7 1026 aa23.4■■□□□ 1.34
CD44-222ENST00000526025 DAXXQ9UER7 740 aaPredicted RBP23.4■■□□□ 1.34
CD44-222ENST00000526025 PCDHA12Q9UN75 941 aa23.4■■□□□ 1.34
CD44-222ENST00000526025 CEP131Q9UPN4 1083 aa23.4■■□□□ 1.34
CD44-222ENST00000526025 MORC2Q9Y6X9 1032 aaPredicted RBP23.4■■□□□ 1.34
CD44-222ENST00000526025 PSAPP07602 524 aa23.39■■□□□ 1.33
CD44-222ENST00000526025 ZNF286BP0CG31 522 aa23.39■■□□□ 1.33
CD44-222ENST00000526025 ATP2C1P98194 919 aaPredicted RBP23.39■■□□□ 1.33
CD44-222ENST00000526025 PTPN11Q06124 597 aaPredicted RBP23.39■■□□□ 1.33
CD44-222ENST00000526025 SPIRE1Q08AE8 756 aa23.39■■□□□ 1.33
CD44-222ENST00000526025 PTGDRQ13258 359 aa23.39■■□□□ 1.33
CD44-222ENST00000526025 PKP1Q13835 747 aa23.39■■□□□ 1.33
CD44-222ENST00000526025 NFRKBQ6P4R8 1299 aa23.39■■□□□ 1.33
CD44-222ENST00000526025 SLC39A5Q6ZMH5 540 aa23.39■■□□□ 1.33
CD44-222ENST00000526025 SESTD1Q86VW0 696 aa23.39■■□□□ 1.33
CD44-222ENST00000526025 GJA10Q969M2 543 aa23.39■■□□□ 1.33
CD44-222ENST00000526025 FERMT2Q96AC1 680 aa23.39■■□□□ 1.33
CD44-222ENST00000526025 UIMC1Q96RL1 719 aa23.39■■□□□ 1.33
CD44-222ENST00000526025 AZI2Q9H6S1 392 aa23.39■■□□□ 1.33
CD44-222ENST00000526025 TTC12Q9H892 705 aaPredicted RBP23.39■■□□□ 1.33
CD44-222ENST00000526025 DISC1Q9NRI5 854 aa23.39■■□□□ 1.33
CD44-222ENST00000526025 ERAP1Q9NZ08 941 aa23.39■■□□□ 1.33
CD44-222ENST00000526025 RBM19Q9Y4C8 960 aaKnown RBP23.39■■□□□ 1.33
CD44-222ENST00000526025 MROH7Q68CQ1 1323 aa23.38■■□□□ 1.33
CD44-222ENST00000526025 H3BRB1 525 aa23.38■■□□□ 1.33
CD44-222ENST00000526025 PSEN2P49810 448 aa23.38■■□□□ 1.33
CD44-222ENST00000526025 FAM160B1Q5W0V3 765 aa23.38■■□□□ 1.33
CD44-222ENST00000526025 ARL6IP4Q66PJ3 421 aaKnown RBP23.38■■□□□ 1.33
CD44-222ENST00000526025 MIER3Q7Z3K6 550 aa23.38■■□□□ 1.33
CD44-222ENST00000526025 PCYT2Q99447 389 aa23.38■■□□□ 1.33
CD44-222ENST00000526025 HTATIP2Q9BUP3 242 aa23.38■■□□□ 1.33
CD44-222ENST00000526025 TUT1Q9H6E5 874 aaKnown RBP23.38■■□□□ 1.33
CD44-222ENST00000526025 IGSF9BQ9UPX0 1349 aa23.37■■□□□ 1.33
CD44-222ENST00000526025 ARVCFO00192 962 aa23.37■■□□□ 1.33
CD44-222ENST00000526025 TXKP42681 527 aa23.37■■□□□ 1.33
CD44-222ENST00000526025 CDK7P50613 346 aa23.37■■□□□ 1.33
CD44-222ENST00000526025 FXR2P51116 673 aaKnown RBP eCLIP23.37■■□□□ 1.33
CD44-222ENST00000526025 NUCB2P80303 420 aa23.37■■□□□ 1.33
CD44-222ENST00000526025 ITGA7Q13683 1181 aa23.37■■□□□ 1.33
CD44-222ENST00000526025 MFSD10Q14728 455 aa23.37■■□□□ 1.33
CD44-222ENST00000526025 ATL3Q6DD88 541 aa23.37■■□□□ 1.33
CD44-222ENST00000526025 GRIN2DO15399 1336 aa23.36■■□□□ 1.33
CD44-222ENST00000526025 STAT5BP51692 787 aa23.36■■□□□ 1.33
CD44-222ENST00000526025 EPHA7Q15375 998 aa23.36■■□□□ 1.33
CD44-222ENST00000526025 KIAA0753Q2KHM9 967 aa23.36■■□□□ 1.33
CD44-222ENST00000526025 TMEM266Q2M3C6 531 aa23.36■■□□□ 1.33
CD44-222ENST00000526025 UTP14CQ5TAP6 766 aaKnown RBP23.36■■□□□ 1.33
CD44-222ENST00000526025 ANKRD33Q7Z3H0 272 aa23.36■■□□□ 1.33
CD44-222ENST00000526025 CCDC60Q8IWA6 550 aaPredicted RBP23.36■■□□□ 1.33
CD44-222ENST00000526025 GLG1Q92896 1179 aa23.36■■□□□ 1.33
CD44-222ENST00000526025 TNPO1Q92973 898 aaKnown RBP23.36■■□□□ 1.33
CD44-222ENST00000526025 VTI1AQ96AJ9 217 aa23.36■■□□□ 1.33
CD44-222ENST00000526025 ZNF396Q96N95 335 aaPredicted RBP23.36■■□□□ 1.33
CD44-222ENST00000526025 TOX2Q96NM4 488 aa23.36■■□□□ 1.33
CD44-222ENST00000526025 ZNF302Q9NR11 478 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms