RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 LMBR1Q8WVP7 490 aa7.59□□□□□ -1.19
CD44-221ENST00000526000 PABPC5Q96DU9 382 aaKnown RBP7.59□□□□□ -1.19
CD44-221ENST00000526000 FBXL18Q96ME1 805 aa7.59□□□□□ -1.19
CD44-221ENST00000526000 NSUN3Q9H649 340 aaKnown RBP7.59□□□□□ -1.19
CD44-221ENST00000526000 RIOX1Q9H6W3 641 aa7.59□□□□□ -1.19
CD44-221ENST00000526000 PCDHGC5Q9Y5F6 944 aa7.59□□□□□ -1.19
CD44-221ENST00000526000 BDP1A6H8Y1 2624 aa7.59□□□□□ -1.19
CD44-221ENST00000526000 GSTTP1A0A1W2PQM5 241 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 POTEB3A0JP26 581 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 PRR33A8MZF0 331 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 E7EWF7 191 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 FIBPO43427 364 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 DCXO43602 365 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 CYP21A2P08686 494 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 PDE4AP27815 886 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 CD52P31358 61 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 IRS1P35568 1242 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 TCF7P36402 384 aaPredicted RBP7.58□□□□□ -1.2
CD44-221ENST00000526000 MRE11P49959 708 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 PPFIA1Q13136 1202 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 LPIN1Q14693 890 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 UBE2SQ16763 222 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 GNPTABQ3T906 1256 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 TIGD5Q53EQ6 642 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 POTEBQ6S5H4 581 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 METTL7BQ6UX53 244 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 TRMT1LQ7Z2T5 733 aaKnown RBP7.58□□□□□ -1.2
CD44-221ENST00000526000 CATIPQ7Z7H3 387 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 RALYLQ86SE5 291 aaKnown RBP7.58□□□□□ -1.2
CD44-221ENST00000526000 RTN4RL1Q86UN2 441 aaPredicted RBP7.58□□□□□ -1.2
CD44-221ENST00000526000 TRAPPC12Q8WVT3 735 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 GLG1Q92896 1179 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 CUL5Q93034 780 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 SAMD11Q96NU1 681 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 INPP4AQ96PE3 977 aaPredicted RBP7.58□□□□□ -1.2
CD44-221ENST00000526000 MAF1Q9H063 256 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 OSBPL3Q9H4L5 887 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 AGO3Q9H9G7 860 aaKnown RBP7.58□□□□□ -1.2
CD44-221ENST00000526000 MAP3K20Q9NYL2 800 aaKnown RBP7.58□□□□□ -1.2
CD44-221ENST00000526000 MUTYHQ9UIF7 546 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 CDY2AQ9Y6F7 541 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 MYH7BA7E2Y1 1941 aa7.58□□□□□ -1.2
CD44-221ENST00000526000 MEIS2O14770 477 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 PER2O15055 1255 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 MBTPS2O43462 519 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 PLEKHA8P1O95397 391 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 DNAJB1P25685 340 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 ICAM3P32942 547 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 ANTXR2P58335 489 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 ADAM17P78536 824 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 GHRHRQ02643 423 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 ZP2Q05996 745 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 TROAPQ12815 778 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 COL9A3Q14050 684 aaPredicted RBP7.57□□□□□ -1.2
CD44-221ENST00000526000 GRIK4Q16099 956 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 TMEM266Q2M3C6 531 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 PUS10Q3MIT2 529 aaKnown RBP7.57□□□□□ -1.2
CD44-221ENST00000526000 FAM26DQ5JW98 314 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 NFXL1Q6ZNB6 911 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 HFE2Q6ZVN8 426 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 ADGRD2Q7Z7M1 963 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 NLRX1Q86UT6 975 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 TICAM2Q86XR7 235 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 SRBD1Q8N5C6 995 aaKnown RBP7.57□□□□□ -1.2
CD44-221ENST00000526000 NCOA7Q8NI08 942 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 IGDCC4Q8TDY8 1250 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 MICAL1Q8TDZ2 1067 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 SEPT1Q8WYJ6 367 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 RRP36Q96EU6 259 aaKnown RBP7.57□□□□□ -1.2
CD44-221ENST00000526000 PGBD1Q96JS3 809 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 PPP1R16BQ96T49 567 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 PHOX2BQ99453 314 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 LRRC2Q9BYS8 371 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 ZNF215Q9UL58 517 aaPredicted RBP7.57□□□□□ -1.2
CD44-221ENST00000526000 PLAGL2Q9UPG8 496 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 GINS2Q9Y248 185 aa7.57□□□□□ -1.2
CD44-221ENST00000526000 MRPL42Q9Y6G3 142 aaKnown RBP7.57□□□□□ -1.2
CD44-221ENST00000526000 U3KPZ7 1027 aaPredicted RBP7.57□□□□□ -1.2
CD44-221ENST00000526000 PTPRSQ13332 1948 aa7.56□□□□□ -1.2
CD44-221ENST00000526000 MUC6Q6W4X9 2439 aa7.56□□□□□ -1.2
CD44-221ENST00000526000 STXBP3O00186 592 aa7.56□□□□□ -1.2
CD44-221ENST00000526000 RB1P06400 928 aa7.56□□□□□ -1.2
CD44-221ENST00000526000 INSRRP14616 1297 aa7.56□□□□□ -1.2
CD44-221ENST00000526000 GSPT1P15170 499 aaKnown RBP7.56□□□□□ -1.2
CD44-221ENST00000526000 ITGB5P18084 799 aa7.56□□□□□ -1.2
CD44-221ENST00000526000 CHMLP26374 656 aa7.56□□□□□ -1.2
CD44-221ENST00000526000 HOXC8P31273 242 aa7.56□□□□□ -1.2
CD44-221ENST00000526000 NRIP1P48552 1158 aa7.56□□□□□ -1.2
CD44-221ENST00000526000 NDUFV1P49821 464 aa7.56□□□□□ -1.2
CD44-221ENST00000526000 IRX6P78412 446 aaPredicted RBP7.56□□□□□ -1.2
CD44-221ENST00000526000 RBM10P98175 930 aaKnown RBP7.56□□□□□ -1.2
CD44-221ENST00000526000 NHLH1Q02575 133 aa7.56□□□□□ -1.2
CD44-221ENST00000526000 MGAT3Q09327 533 aa7.56□□□□□ -1.2
CD44-221ENST00000526000 NFX1Q12986 1120 aaKnown RBP7.56□□□□□ -1.2
CD44-221ENST00000526000 TRAF1Q13077 416 aa7.56□□□□□ -1.2
CD44-221ENST00000526000 ADAM15Q13444 863 aa7.56□□□□□ -1.2
CD44-221ENST00000526000 CAMK1Q14012 370 aa7.56□□□□□ -1.2
CD44-221ENST00000526000 FBXO47Q5MNV8 452 aa7.56□□□□□ -1.2
CD44-221ENST00000526000 MARCH8Q5T0T0 291 aa7.56□□□□□ -1.2
CD44-221ENST00000526000 SPOUT1Q5T280 376 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms