RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 UIMC1Q96RL1 719 aa13.82□□□□□ -0.2
SSBP3-210ENST00000525990 SENP7Q9BQF6 1050 aa13.82□□□□□ -0.2
SSBP3-210ENST00000525990 USP26Q9BXU7 913 aa13.82□□□□□ -0.2
SSBP3-210ENST00000525990 RIC8AQ9NPQ8 531 aa13.82□□□□□ -0.2
SSBP3-210ENST00000525990 PRRC2BQ5JSZ5 2229 aaKnown RBP13.81□□□□□ -0.2
SSBP3-210ENST00000525990 SMCO2A6NFE2 343 aa13.81□□□□□ -0.2
SSBP3-210ENST00000525990 BAIAP3O94812 1187 aa13.81□□□□□ -0.2
SSBP3-210ENST00000525990 ARP10275 920 aa13.81□□□□□ -0.2
SSBP3-210ENST00000525990 RPS6KB1P23443 525 aa13.81□□□□□ -0.2
SSBP3-210ENST00000525990 METAP2P50579 478 aaKnown RBP eCLIP13.81□□□□□ -0.28e-8■■□□□ 13.1
SSBP3-210ENST00000525990 ADAM17P78536 824 aa13.81□□□□□ -0.2
SSBP3-210ENST00000525990 ARHGAP4P98171 946 aa13.81□□□□□ -0.2
SSBP3-210ENST00000525990 FGD1P98174 961 aa13.81□□□□□ -0.2
SSBP3-210ENST00000525990 TAP1Q03518 808 aa13.81□□□□□ -0.2
SSBP3-210ENST00000525990 FAM117BQ6P1L5 589 aa13.81□□□□□ -0.2
SSBP3-210ENST00000525990 BLOC1S2Q6QNY1 142 aa13.81□□□□□ -0.2
SSBP3-210ENST00000525990 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.81□□□□□ -0.2
SSBP3-210ENST00000525990 RUFY4Q6ZNE9 571 aa13.81□□□□□ -0.2
SSBP3-210ENST00000525990 PCYT2Q99447 389 aa13.81□□□□□ -0.2
SSBP3-210ENST00000525990 ANO3Q9BYT9 981 aa13.81□□□□□ -0.2
SSBP3-210ENST00000525990 JADE2Q9NQC1 790 aa13.81□□□□□ -0.2
SSBP3-210ENST00000525990 MYH9P35579 1960 aaKnown RBP13.81□□□□□ -0.2
SSBP3-210ENST00000525990 TCF20Q9UGU0 1960 aaKnown RBP13.81□□□□□ -0.2
SSBP3-210ENST00000525990 EVPLQ92817 2033 aa13.81□□□□□ -0.2
SSBP3-210ENST00000525990 RSPH10B2B2RC85 870 aa13.8□□□□□ -0.2
SSBP3-210ENST00000525990 RSPH10BP0C881 870 aa13.8□□□□□ -0.2
SSBP3-210ENST00000525990 KCNJ6P48051 423 aa13.8□□□□□ -0.2
SSBP3-210ENST00000525990 CLK2P49760 499 aaKnown RBP13.8□□□□□ -0.2
SSBP3-210ENST00000525990 ADCY7P51828 1080 aa13.8□□□□□ -0.2
SSBP3-210ENST00000525990 PKN1Q16512 942 aa13.8□□□□□ -0.2
SSBP3-210ENST00000525990 MICALL1Q8N3F8 863 aa13.8□□□□□ -0.2
SSBP3-210ENST00000525990 DBF4BQ8NFT6 615 aa13.8□□□□□ -0.2
SSBP3-210ENST00000525990 PHKBQ93100 1093 aa13.8□□□□□ -0.2
SSBP3-210ENST00000525990 MXRA8Q9BRK3 442 aa13.8□□□□□ -0.2
SSBP3-210ENST00000525990 LARP6Q9BRS8 491 aaKnown RBP13.8□□□□□ -0.2
SSBP3-210ENST00000525990 NCOA5Q9HCD5 579 aaKnown RBP13.8□□□□□ -0.2
SSBP3-210ENST00000525990 KCNH7Q9NS40 1196 aa13.8□□□□□ -0.2
SSBP3-210ENST00000525990 BARHL2Q9NY43 387 aa13.8□□□□□ -0.2
SSBP3-210ENST00000525990 KIAA1671Q9BY89 1806 aa13.8□□□□□ -0.2
SSBP3-210ENST00000525990 NID2Q14112 1375 aa13.8□□□□□ -0.2
SSBP3-210ENST00000525990 TLL1O43897 1013 aa13.79□□□□□ -0.2
SSBP3-210ENST00000525990 LGR5O75473 907 aa13.79□□□□□ -0.2
SSBP3-210ENST00000525990 HMGB1P09429 215 aaKnown RBP13.79□□□□□ -0.2
SSBP3-210ENST00000525990 ITGB3BPQ13352 177 aaPredicted RBP13.79□□□□□ -0.2
SSBP3-210ENST00000525990 MKRN4PQ13434 485 aaPredicted RBP13.79□□□□□ -0.2
SSBP3-210ENST00000525990 JAKMIP3Q5VZ66 844 aa13.79□□□□□ -0.2
SSBP3-210ENST00000525990 PPP1R18Q6NYC8 613 aa13.79□□□□□ -0.2
SSBP3-210ENST00000525990 PHOSPHO2Q8TCD6 241 aa13.79□□□□□ -0.2
SSBP3-210ENST00000525990 ARNTL2Q8WYA1 636 aa13.79□□□□□ -0.2
SSBP3-210ENST00000525990 AGXT2Q9BYV1 514 aa13.79□□□□□ -0.2
SSBP3-210ENST00000525990 ZNF215Q9UL58 517 aaPredicted RBP13.79□□□□□ -0.2
SSBP3-210ENST00000525990 VCANP13611 3396 aa13.79□□□□□ -0.2
SSBP3-210ENST00000525990 DDX39AO00148 427 aaKnown RBP13.78□□□□□ -0.2
SSBP3-210ENST00000525990 SCG2P13521 617 aa13.78□□□□□ -0.2
SSBP3-210ENST00000525990 CCT2P78371 535 aaKnown RBP13.78□□□□□ -0.2
SSBP3-210ENST00000525990 TOB2Q14106 344 aaPredicted RBP13.78□□□□□ -0.2
SSBP3-210ENST00000525990 NTRK3Q16288 839 aa13.78□□□□□ -0.2
SSBP3-210ENST00000525990 PFKFB3Q16875 520 aaPredicted RBP13.78□□□□□ -0.2
SSBP3-210ENST00000525990 PLEKHG4Q58EX7 1191 aa13.78□□□□□ -0.2
SSBP3-210ENST00000525990 MARCH8Q5T0T0 291 aa13.78□□□□□ -0.2
SSBP3-210ENST00000525990 GIMAP8Q8ND71 665 aaPredicted RBP13.78□□□□□ -0.2
SSBP3-210ENST00000525990 RASGRP4Q8TDF6 673 aa13.78□□□□□ -0.2
SSBP3-210ENST00000525990 TRAPPC12Q8WVT3 735 aa13.78□□□□□ -0.2
SSBP3-210ENST00000525990 SEPT1Q8WYJ6 367 aa13.78□□□□□ -0.2
SSBP3-210ENST00000525990 CDHR1Q96JP9 859 aa13.78□□□□□ -0.2
SSBP3-210ENST00000525990 MTUS1Q9ULD2 1270 aa13.78□□□□□ -0.2
SSBP3-210ENST00000525990 RALGAPA2Q2PPJ7 1873 aa13.78□□□□□ -0.2
SSBP3-210ENST00000525990 A0A0C4DFX4 3053 aa13.77□□□□□ -0.2
SSBP3-210ENST00000525990 ABHD14A-ACY1A0A1B0GW23 586 aa13.77□□□□□ -0.21
SSBP3-210ENST00000525990 FAM86B1E9PN63 330 aa13.77□□□□□ -0.21
SSBP3-210ENST00000525990 DTNBO60941 627 aa13.77□□□□□ -0.21
SSBP3-210ENST00000525990 REC8O95072 547 aa13.77□□□□□ -0.21
SSBP3-210ENST00000525990 GJB5O95377 273 aa13.77□□□□□ -0.21
SSBP3-210ENST00000525990 PARNO95453 639 aaKnown RBP13.77□□□□□ -0.21
SSBP3-210ENST00000525990 CCNE2O96020 404 aa13.77□□□□□ -0.21
SSBP3-210ENST00000525990 FAM86B2P0C5J1 330 aa13.77□□□□□ -0.21
SSBP3-210ENST00000525990 SREBF1P36956 1147 aa13.77□□□□□ -0.21
SSBP3-210ENST00000525990 RCAN1P53805 252 aa13.77□□□□□ -0.21
SSBP3-210ENST00000525990 IGBP1P78318 339 aa13.77□□□□□ -0.21
SSBP3-210ENST00000525990 PPFIA1Q13136 1202 aa13.77□□□□□ -0.21
SSBP3-210ENST00000525990 COL4A6Q14031 1691 aa13.77□□□□□ -0.21
SSBP3-210ENST00000525990 IKBKEQ14164 716 aa13.77□□□□□ -0.21
SSBP3-210ENST00000525990 GRIK4Q16099 956 aa13.77□□□□□ -0.21
SSBP3-210ENST00000525990 EMSYQ7Z589 1322 aa13.77□□□□□ -0.21
SSBP3-210ENST00000525990 GLG1Q92896 1179 aa13.77□□□□□ -0.21
SSBP3-210ENST00000525990 ZBED2Q9BTP6 218 aa13.77□□□□□ -0.21
SSBP3-210ENST00000525990 UPF3BQ9BZI7 483 aaKnown RBP13.77□□□□□ -0.21
SSBP3-210ENST00000525990 EHMT1Q9H9B1 1298 aa13.77□□□□□ -0.21
SSBP3-210ENST00000525990 AGO4Q9HCK5 861 aaKnown RBP13.77□□□□□ -0.21
SSBP3-210ENST00000525990 JPH1Q9HDC5 661 aaPredicted RBP13.77□□□□□ -0.21
SSBP3-210ENST00000525990 SLC9A2Q9UBY0 812 aa13.77□□□□□ -0.21
SSBP3-210ENST00000525990 TRANK1O15050 2925 aa13.77□□□□□ -0.21
SSBP3-210ENST00000525990 NRCAMQ92823 1304 aa13.76□□□□□ -0.21
SSBP3-210ENST00000525990 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.76□□□□□ -0.21
SSBP3-210ENST00000525990 hCG_1984214I3L0E3 225 aa13.76□□□□□ -0.21
SSBP3-210ENST00000525990 LPXNO60711 386 aa13.76□□□□□ -0.21
SSBP3-210ENST00000525990 CHRNA1P02708 482 aa13.76□□□□□ -0.21
SSBP3-210ENST00000525990 PDIA3P30101 505 aaKnown RBP13.76□□□□□ -0.21
SSBP3-210ENST00000525990 ACTR2P61160 394 aa13.76□□□□□ -0.21
SSBP3-210ENST00000525990 CEP55Q53EZ4 464 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms