RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 SMARCAD1Q9H4L7 1026 aa13.99□□□□□ -0.17
CCS-202ENST00000525435 ZSCAN16Q9H4T2 348 aaPredicted RBP13.99□□□□□ -0.17
CCS-202ENST00000525435 TUT1Q9H6E5 874 aaKnown RBP13.99□□□□□ -0.17
CCS-202ENST00000525435 PKD2L1Q9P0L9 805 aa13.99□□□□□ -0.17
CCS-202ENST00000525435 PCDHA10Q9Y5I2 948 aa13.99□□□□□ -0.17
CCS-202ENST00000525435 IGKV6D-21A0A0A0MT36 114 aa13.98□□□□□ -0.17
CCS-202ENST00000525435 LAD1O00515 517 aa13.98□□□□□ -0.17
CCS-202ENST00000525435 SLC37A4O43826 429 aa13.98□□□□□ -0.17
CCS-202ENST00000525435 MARCH6O60337 910 aa13.98□□□□□ -0.17
CCS-202ENST00000525435 CCNE2O96020 404 aa13.98□□□□□ -0.17
CCS-202ENST00000525435 LGALS2P05162 132 aa13.98□□□□□ -0.17
CCS-202ENST00000525435 TCF7P36402 384 aaPredicted RBP13.98□□□□□ -0.17
CCS-202ENST00000525435 TOB1P50616 345 aaPredicted RBP13.98□□□□□ -0.17
CCS-202ENST00000525435 TTC38Q5R3I4 469 aa13.98□□□□□ -0.17
CCS-202ENST00000525435 MIS18BP1Q6P0N0 1132 aa13.98□□□□□ -0.17
CCS-202ENST00000525435 ABHD15Q6UXT9 468 aa13.98□□□□□ -0.17
CCS-202ENST00000525435 HAS1Q92839 578 aa13.98□□□□□ -0.17
CCS-202ENST00000525435 MTMR9Q96QG7 549 aa13.98□□□□□ -0.17
CCS-202ENST00000525435 AZI2Q9H6S1 392 aa13.98□□□□□ -0.17
CCS-202ENST00000525435 ZNF215Q9UL58 517 aaPredicted RBP13.98□□□□□ -0.17
CCS-202ENST00000525435 PCDHA12Q9UN75 941 aa13.98□□□□□ -0.17
CCS-202ENST00000525435 MTMR6Q9Y217 621 aa13.98□□□□□ -0.17
CCS-202ENST00000525435 NR2E3Q9Y5X4 410 aa13.98□□□□□ -0.17
CCS-202ENST00000525435 GRIN2DO15399 1336 aa13.97□□□□□ -0.17
CCS-202ENST00000525435 EMSYQ7Z589 1322 aa13.97□□□□□ -0.17
CCS-202ENST00000525435 VPS37CA5D8V6 355 aaPredicted RBP13.97□□□□□ -0.17
CCS-202ENST00000525435 DCDC2CA8MYV0 355 aa13.97□□□□□ -0.17
CCS-202ENST00000525435 WDR64B1ANS9 1081 aa13.97□□□□□ -0.17
CCS-202ENST00000525435 PSAPP07602 524 aa13.97□□□□□ -0.17
CCS-202ENST00000525435 SUPT20HL2P0C7V6 817 aa13.97□□□□□ -0.17
CCS-202ENST00000525435 PSEN2P49810 448 aa13.97□□□□□ -0.17
CCS-202ENST00000525435 STAT5BP51692 787 aa13.97□□□□□ -0.17
CCS-202ENST00000525435 JAK3P52333 1124 aa13.97□□□□□ -0.17
CCS-202ENST00000525435 PPP2R5CQ13362 524 aa13.97□□□□□ -0.17
CCS-202ENST00000525435 MFSD10Q14728 455 aa13.97□□□□□ -0.17
CCS-202ENST00000525435 CALCRLQ16602 461 aa13.97□□□□□ -0.17
CCS-202ENST00000525435 LRRC26Q2I0M4 334 aa13.97□□□□□ -0.17
CCS-202ENST00000525435 NBPF20Q3BBV1 942 aa13.97□□□□□ -0.17
CCS-202ENST00000525435 AFAP1L1Q8TED9 768 aa13.97□□□□□ -0.17
CCS-202ENST00000525435 DPF3Q92784 378 aa13.97□□□□□ -0.17
CCS-202ENST00000525435 DISC1Q9NRI5 854 aa13.97□□□□□ -0.17
CCS-202ENST00000525435 FOXD4L1Q9NU39 408 aa13.97□□□□□ -0.17
CCS-202ENST00000525435 ERAP1Q9NZ08 941 aa13.97□□□□□ -0.17
CCS-202ENST00000525435 MKI67P46013 3256 aaKnown RBP13.96□□□□□ -0.17
CCS-202ENST00000525435 MYH7BA7E2Y1 1941 aa13.96□□□□□ -0.17
CCS-202ENST00000525435 EVI5O60447 810 aa13.96□□□□□ -0.17
CCS-202ENST00000525435 SORBS3O60504 671 aa13.96□□□□□ -0.17
CCS-202ENST00000525435 BMP15O95972 392 aa13.96□□□□□ -0.17
CCS-202ENST00000525435 ATP2B1P20020 1258 aa13.96□□□□□ -0.17
CCS-202ENST00000525435 MCM7P33993 719 aa13.96□□□□□ -0.17
CCS-202ENST00000525435 ATN1P54259 1190 aaPredicted RBP13.96□□□□□ -0.17
CCS-202ENST00000525435 RTP1P59025 263 aa13.96□□□□□ -0.17
CCS-202ENST00000525435 SP4Q02446 784 aa13.96□□□□□ -0.17
CCS-202ENST00000525435 ZNF174Q15697 407 aa13.96□□□□□ -0.17
CCS-202ENST00000525435 KIAA0753Q2KHM9 967 aa13.96□□□□□ -0.17
CCS-202ENST00000525435 FAM160B1Q5W0V3 765 aa13.96□□□□□ -0.17
CCS-202ENST00000525435 POTEDQ86YR6 584 aa13.96□□□□□ -0.17
CCS-202ENST00000525435 GLG1Q92896 1179 aa13.96□□□□□ -0.17
CCS-202ENST00000525435 BACH1O14867 736 aa13.95□□□□□ -0.18
CCS-202ENST00000525435 TLR3O15455 904 aaKnown RBP13.95□□□□□ -0.18
CCS-202ENST00000525435 ZNF286BP0CG31 522 aa13.95□□□□□ -0.18
CCS-202ENST00000525435 GNAT1P11488 350 aa13.95□□□□□ -0.18
CCS-202ENST00000525435 PSMC6P62333 389 aa13.95□□□□□ -0.18
CCS-202ENST00000525435 TLE2Q04725 743 aa13.95□□□□□ -0.18
CCS-202ENST00000525435 UTP14CQ5TAP6 766 aaKnown RBP13.95□□□□□ -0.18
CCS-202ENST00000525435 SWSAP1Q6NVH7 229 aa13.95□□□□□ -0.18
CCS-202ENST00000525435 C7orf31Q8N865 590 aa13.95□□□□□ -0.18
CCS-202ENST00000525435 C4orf32Q8N8J7 132 aa13.95□□□□□ -0.18
CCS-202ENST00000525435 PCYT2Q99447 389 aa13.95□□□□□ -0.18
CCS-202ENST00000525435 TTC12Q9H892 705 aaPredicted RBP13.95□□□□□ -0.18
CCS-202ENST00000525435 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.95□□□□□ -0.18
CCS-202ENST00000525435 VAV3Q9UKW4 847 aa13.95□□□□□ -0.18
CCS-202ENST00000525435 TELO2Q9Y4R8 837 aa13.95□□□□□ -0.18
CCS-202ENST00000525435 MAFBQ9Y5Q3 323 aaPredicted RBP13.95□□□□□ -0.18
CCS-202ENST00000525435 DDX39AO00148 427 aaKnown RBP13.94□□□□□ -0.18
CCS-202ENST00000525435 WNT7AO00755 349 aa13.94□□□□□ -0.18
CCS-202ENST00000525435 DKC1O60832 514 aaKnown RBP eCLIP13.94□□□□□ -0.18
CCS-202ENST00000525435 CD4P01730 458 aa13.94□□□□□ -0.18
CCS-202ENST00000525435 OR52Z1P0C646 297 aa13.94□□□□□ -0.18
CCS-202ENST00000525435 HOXC8P31273 242 aa13.94□□□□□ -0.18
CCS-202ENST00000525435 PRPHP41219 470 aa13.94□□□□□ -0.18
CCS-202ENST00000525435 PTGDRQ13258 359 aa13.94□□□□□ -0.18
CCS-202ENST00000525435 PDIA5Q14554 519 aa13.94□□□□□ -0.18
CCS-202ENST00000525435 EPHA7Q15375 998 aa13.94□□□□□ -0.18
CCS-202ENST00000525435 TRIM60Q495X7 471 aa13.94□□□□□ -0.18
CCS-202ENST00000525435 ARL6IP4Q66PJ3 421 aaKnown RBP13.94□□□□□ -0.18
CCS-202ENST00000525435 MIER3Q7Z3K6 550 aa13.94□□□□□ -0.18
CCS-202ENST00000525435 FAM126BQ8IXS8 530 aa13.94□□□□□ -0.18
CCS-202ENST00000525435 TMEM60Q9H2L4 133 aa13.94□□□□□ -0.18
CCS-202ENST00000525435 UNC45AQ9H3U1 944 aa13.94□□□□□ -0.18
CCS-202ENST00000525435 ZNF302Q9NR11 478 aa13.94□□□□□ -0.18
CCS-202ENST00000525435 GTF2IRD1Q9UHL9 959 aa13.94□□□□□ -0.18
CCS-202ENST00000525435 CEP131Q9UPN4 1083 aa13.94□□□□□ -0.18
CCS-202ENST00000525435 ATP11BQ9Y2G3 1177 aa13.94□□□□□ -0.18
CCS-202ENST00000525435 SAMM50Q9Y512 469 aa13.94□□□□□ -0.18
CCS-202ENST00000525435 PCDHB6Q9Y5E3 794 aa13.94□□□□□ -0.18
CCS-202ENST00000525435 STK24Q9Y6E0 443 aa13.94□□□□□ -0.18
CCS-202ENST00000525435 NRCAMQ92823 1304 aa13.93□□□□□ -0.18
CCS-202ENST00000525435 FRMPD3Q5JV73 1810 aa13.93□□□□□ -0.18
CCS-202ENST00000525435 RRN3P2A6NIE6 340 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms