RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 SLC5A5Q92911 643 aa7.36□□□□□ -1.23
CD44-214ENST00000525211 ARMC5Q96C12 935 aa7.36□□□□□ -1.23
CD44-214ENST00000525211 MAF1Q9H063 256 aa7.36□□□□□ -1.23
CD44-214ENST00000525211 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.36□□□□□ -1.23
CD44-214ENST00000525211 GLT8D2Q9H1C3 349 aa7.36□□□□□ -1.23
CD44-214ENST00000525211 UNC45AQ9H3U1 944 aa7.36□□□□□ -1.23
CD44-214ENST00000525211 ABHD16BQ9H3Z7 469 aa7.36□□□□□ -1.23
CD44-214ENST00000525211 VTA1Q9NP79 307 aa7.36□□□□□ -1.23
CD44-214ENST00000525211 KCNMB3Q9NPA1 279 aa7.36□□□□□ -1.23
CD44-214ENST00000525211 WRAP73Q9P2S5 460 aaPredicted RBP7.36□□□□□ -1.23
CD44-214ENST00000525211 DDX25Q9UHL0 483 aaKnown RBP7.36□□□□□ -1.23
CD44-214ENST00000525211 VAV3Q9UKW4 847 aa7.36□□□□□ -1.23
CD44-214ENST00000525211 SYNRGQ9UMZ2 1314 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 GSTTP1A0A1W2PQM5 241 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 SEPT4O43236 478 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 ADAMTS4O75173 837 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 FARP2O94887 1054 aaPredicted RBP7.35□□□□□ -1.23
CD44-214ENST00000525211 GGPS1O95749 300 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 TXNP10599 105 aaKnown RBP7.35□□□□□ -1.23
CD44-214ENST00000525211 HOXB1P14653 301 aaPredicted RBP7.35□□□□□ -1.23
CD44-214ENST00000525211 PDCP20941 246 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 MARCKSP29966 332 aaPredicted RBP7.35□□□□□ -1.23
CD44-214ENST00000525211 CDC25AP30304 524 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 ZNF76P36508 570 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 TNFAIP2Q03169 654 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 MTMR1Q13613 665 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 SF3A1Q15459 793 aaKnown RBP7.35□□□□□ -1.23
CD44-214ENST00000525211 ECM1Q16610 540 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 UGCGQ16739 394 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 SPECC1Q5M775 1068 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 CELF3Q5SZQ8 465 aaKnown RBP7.35□□□□□ -1.23
CD44-214ENST00000525211 PPP4R3AQ6IN85 833 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 CCSAPQ6IQ19 270 aaPredicted RBP7.35□□□□□ -1.23
CD44-214ENST00000525211 CYFIP1Q7L576 1253 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 NIPA1Q7RTP0 329 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 TRIM50Q86XT4 487 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 MSL3Q8N5Y2 521 aaKnown RBP7.35□□□□□ -1.23
CD44-214ENST00000525211 TTC13Q8NBP0 860 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 DIS3LQ8TF46 1054 aaKnown RBP7.35□□□□□ -1.23
CD44-214ENST00000525211 AFG1LQ8WV93 481 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 GPRASP2Q96D09 838 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 ZBTB10Q96DT7 871 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 CLIC6Q96NY7 704 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 DEFB118Q96PH6 123 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 BRMS1Q9HCU9 246 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 PAK6Q9NQU5 681 aaPredicted RBP7.35□□□□□ -1.23
CD44-214ENST00000525211 SLC5A4Q9NY91 659 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 DDX20Q9UHI6 824 aaKnown RBP7.35□□□□□ -1.23
CD44-214ENST00000525211 FAM184BQ9ULE4 1060 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 CNPY2Q9Y2B0 182 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 KIF3AQ9Y496 699 aa7.35□□□□□ -1.23
CD44-214ENST00000525211 TMEM150BA6NC51 233 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 POTEMA6NI47 508 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 IPO5O00410 1097 aaKnown RBP7.34□□□□□ -1.23
CD44-214ENST00000525211 ZBTB39O15060 712 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 FIBPO43427 364 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 STBD1O95210 358 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 EN2P19622 333 aaPredicted RBP7.34□□□□□ -1.23
CD44-214ENST00000525211 ATP4AP20648 1035 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 COL9A1P20849 921 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 TXKP42681 527 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 PRSS12P56730 875 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 ATP2C1P98194 919 aaPredicted RBP7.34□□□□□ -1.23
CD44-214ENST00000525211 GNL2Q13823 731 aaKnown RBP7.34□□□□□ -1.23
CD44-214ENST00000525211 LRRC41Q15345 812 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 DUSP28Q4G0W2 176 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 IQSEC1Q6DN90 963 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 XRRA1Q6P2D8 792 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 MOXD1Q6UVY6 613 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 BRAPQ7Z569 592 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 TLK2Q86UE8 772 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 LINC00301Q8NCQ3 95 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 KLHDC9Q8NEP7 349 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 OR6J1Q8NGC5 347 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 SCFD2Q8WU76 684 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 TNPO1Q92973 898 aaKnown RBP7.34□□□□□ -1.23
CD44-214ENST00000525211 GPR20Q99678 358 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 ZNF577Q9BSK1 485 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 MMTAG2Q9BU76 263 aaKnown RBP7.34□□□□□ -1.23
CD44-214ENST00000525211 TMUB1Q9BVT8 246 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 RNF208Q9H0X6 261 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 UPF3AQ9H1J1 476 aaKnown RBP7.34□□□□□ -1.23
CD44-214ENST00000525211 HMX1Q9NP08 348 aaPredicted RBP7.34□□□□□ -1.23
CD44-214ENST00000525211 CHMP5Q9NZZ3 219 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 FBXO2Q9UK22 296 aaPredicted RBP7.34□□□□□ -1.23
CD44-214ENST00000525211 ADGRG1Q9Y653 693 aa7.34□□□□□ -1.23
CD44-214ENST00000525211 KIAA0100Q14667 2235 aaKnown RBP7.33□□□□□ -1.24
CD44-214ENST00000525211 GRIN2DO15399 1336 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 TCHHQ07283 1943 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 MYH15Q9Y2K3 1946 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 A0A087X0B3 334 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 LOC102724159A0A0B4J2E5 919 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 CHMP2AO43633 222 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 ZNF862O60290 1169 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 NEMFO60524 1076 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 MMP3P08254 477 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 OR52Z1P0C646 297 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 ZNF286BP0CG31 522 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 AKR1A1P14550 325 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 TECP42680 631 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms