RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 GOLGA8BA8MQT2 603 aa14.36□□□□□ -0.11
SMCO4-202ENST00000525141 ARP10275 920 aa14.36□□□□□ -0.11
SMCO4-202ENST00000525141 NTRK3Q16288 839 aa14.36□□□□□ -0.11
SMCO4-202ENST00000525141 UTP14CQ5TAP6 766 aaKnown RBP14.36□□□□□ -0.11
SMCO4-202ENST00000525141 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.36□□□□□ -0.11
SMCO4-202ENST00000525141 BRF1Q92994 677 aa14.36□□□□□ -0.11
SMCO4-202ENST00000525141 PCYT2Q99447 389 aa14.36□□□□□ -0.11
SMCO4-202ENST00000525141 MXRA8Q9BRK3 442 aa14.36□□□□□ -0.11
SMCO4-202ENST00000525141 SLC28A3Q9HAS3 691 aa14.36□□□□□ -0.11
SMCO4-202ENST00000525141 BARHL2Q9NY43 387 aa14.36□□□□□ -0.11
SMCO4-202ENST00000525141 PTPRSQ13332 1948 aa14.36□□□□□ -0.11
SMCO4-202ENST00000525141 RFXAPO00287 272 aa14.35□□□□□ -0.11
SMCO4-202ENST00000525141 EDIL3O43854 480 aa14.35□□□□□ -0.11
SMCO4-202ENST00000525141 ACTN1P12814 892 aa14.35□□□□□ -0.11
SMCO4-202ENST00000525141 SP4Q02446 784 aa14.35□□□□□ -0.11
SMCO4-202ENST00000525141 MKRN4PQ13434 485 aaPredicted RBP14.35□□□□□ -0.11
SMCO4-202ENST00000525141 SPRED2Q7Z698 418 aa14.35□□□□□ -0.11
SMCO4-202ENST00000525141 HERC6Q8IVU3 1022 aa14.35□□□□□ -0.11
SMCO4-202ENST00000525141 CCDC155Q8N6L0 562 aa14.35□□□□□ -0.11
SMCO4-202ENST00000525141 SEPT1Q8WYJ6 367 aa14.35□□□□□ -0.11
SMCO4-202ENST00000525141 ATP6V0A1Q93050 837 aa14.35□□□□□ -0.11
SMCO4-202ENST00000525141 UPF3BQ9BZI7 483 aaKnown RBP14.35□□□□□ -0.11
SMCO4-202ENST00000525141 PRDM6Q9NQX0 595 aa14.35□□□□□ -0.11
SMCO4-202ENST00000525141 PDRG1Q9NUG6 133 aa14.35□□□□□ -0.11
SMCO4-202ENST00000525141 PKD2L1Q9P0L9 805 aa14.35□□□□□ -0.11
SMCO4-202ENST00000525141 TANC1Q9C0D5 1861 aa14.34□□□□□ -0.11
SMCO4-202ENST00000525141 CCDC196A0A1B0GTZ2 297 aa14.34□□□□□ -0.11
SMCO4-202ENST00000525141 EPOPA6NHQ4 379 aa14.34□□□□□ -0.11
SMCO4-202ENST00000525141 SPDYE3A6NKU9 549 aa14.34□□□□□ -0.11
SMCO4-202ENST00000525141 MEIS1O00470 390 aa14.34□□□□□ -0.11
SMCO4-202ENST00000525141 NOP56O00567 594 aaKnown RBP14.34□□□□□ -0.11
SMCO4-202ENST00000525141 MAFGO15525 162 aa14.34□□□□□ -0.11
SMCO4-202ENST00000525141 PRPF3O43395 683 aaKnown RBP14.34□□□□□ -0.11
SMCO4-202ENST00000525141 CA3P07451 260 aa14.34□□□□□ -0.11
SMCO4-202ENST00000525141 PDIA3P30101 505 aaKnown RBP14.34□□□□□ -0.11
SMCO4-202ENST00000525141 TCF7P36402 384 aaPredicted RBP14.34□□□□□ -0.11
SMCO4-202ENST00000525141 THPOP40225 353 aa14.34□□□□□ -0.11
SMCO4-202ENST00000525141 RBM25P49756 843 aaKnown RBP14.34□□□□□ -0.11
SMCO4-202ENST00000525141 NAPAP54920 295 aa14.34□□□□□ -0.11
SMCO4-202ENST00000525141 WDR5P61964 334 aaKnown RBP14.34□□□□□ -0.11
SMCO4-202ENST00000525141 DEFB103AP81534 67 aa14.34□□□□□ -0.11
SMCO4-202ENST00000525141 TOB2Q14106 344 aaPredicted RBP14.34□□□□□ -0.11
SMCO4-202ENST00000525141 PFKFB3Q16875 520 aaPredicted RBP14.34□□□□□ -0.11
SMCO4-202ENST00000525141 MARCH8Q5T0T0 291 aa14.34□□□□□ -0.11
SMCO4-202ENST00000525141 CNKSR3Q6P9H4 555 aa14.34□□□□□ -0.11
SMCO4-202ENST00000525141 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.34□□□□□ -0.11
SMCO4-202ENST00000525141 GIMAP8Q8ND71 665 aaPredicted RBP14.34□□□□□ -0.11
SMCO4-202ENST00000525141 CRYGNQ8WXF5 182 aa14.34□□□□□ -0.11
SMCO4-202ENST00000525141 ZNF274Q96GC6 653 aaPredicted RBP14.34□□□□□ -0.11
SMCO4-202ENST00000525141 C22orf23Q9BZE7 217 aa14.34□□□□□ -0.11
SMCO4-202ENST00000525141 UPF2Q9HAU5 1272 aaKnown RBP14.34□□□□□ -0.11
SMCO4-202ENST00000525141 KCNH7Q9NS40 1196 aa14.34□□□□□ -0.11
SMCO4-202ENST00000525141 KAT6AQ92794 2004 aa14.33□□□□□ -0.12
SMCO4-202ENST00000525141 RSPH10B2B2RC85 870 aa14.33□□□□□ -0.12
SMCO4-202ENST00000525141 PPFIA3O75145 1194 aa14.33□□□□□ -0.12
SMCO4-202ENST00000525141 BAIAP3O94812 1187 aa14.33□□□□□ -0.12
SMCO4-202ENST00000525141 PARNO95453 639 aaKnown RBP14.33□□□□□ -0.12
SMCO4-202ENST00000525141 RSPH10BP0C881 870 aa14.33□□□□□ -0.12
SMCO4-202ENST00000525141 METAP2P50579 478 aaKnown RBP eCLIP14.33□□□□□ -0.12
SMCO4-202ENST00000525141 TAP1Q03518 808 aa14.33□□□□□ -0.12
SMCO4-202ENST00000525141 ITGB3BPQ13352 177 aaPredicted RBP14.33□□□□□ -0.12
SMCO4-202ENST00000525141 MTMR1Q13613 665 aa14.33□□□□□ -0.12
SMCO4-202ENST00000525141 ANKRD1Q15327 319 aa14.33□□□□□ -0.12
SMCO4-202ENST00000525141 FAM26DQ5JW98 314 aa14.33□□□□□ -0.12
SMCO4-202ENST00000525141 DBF4BQ8NFT6 615 aa14.33□□□□□ -0.12
SMCO4-202ENST00000525141 SLC9A7Q96T83 725 aa14.33□□□□□ -0.12
SMCO4-202ENST00000525141 LARP6Q9BRS8 491 aaKnown RBP14.33□□□□□ -0.12
SMCO4-202ENST00000525141 COL25A1Q9BXS0 654 aaPredicted RBP14.33□□□□□ -0.12
SMCO4-202ENST00000525141 ANO3Q9BYT9 981 aa14.33□□□□□ -0.12
SMCO4-202ENST00000525141 CERS4Q9HA82 394 aa14.33□□□□□ -0.12
SMCO4-202ENST00000525141 NID2Q14112 1375 aa14.33□□□□□ -0.12
SMCO4-202ENST00000525141 CUL9Q8IWT3 2517 aa14.33□□□□□ -0.12
SMCO4-202ENST00000525141 ABHD14A-ACY1A0A1B0GW23 586 aa14.32□□□□□ -0.12
SMCO4-202ENST00000525141 LCHNA4D1U4 455 aa14.32□□□□□ -0.12
SMCO4-202ENST00000525141 DHX15O43143 795 aaKnown RBP14.32□□□□□ -0.12
SMCO4-202ENST00000525141 LGR5O75473 907 aa14.32□□□□□ -0.12
SMCO4-202ENST00000525141 ATG7O95352 703 aa14.32□□□□□ -0.12
SMCO4-202ENST00000525141 FOSP01100 380 aaPredicted RBP14.32□□□□□ -0.12
SMCO4-202ENST00000525141 CHRNA1P02708 482 aa14.32□□□□□ -0.12
SMCO4-202ENST00000525141 SCG2P13521 617 aa14.32□□□□□ -0.12
SMCO4-202ENST00000525141 SREBF1P36956 1147 aa14.32□□□□□ -0.12
SMCO4-202ENST00000525141 ADCY7P51828 1080 aa14.32□□□□□ -0.12
SMCO4-202ENST00000525141 PLEKHG4Q58EX7 1191 aa14.32□□□□□ -0.12
SMCO4-202ENST00000525141 JAKMIP3Q5VZ66 844 aa14.32□□□□□ -0.12
SMCO4-202ENST00000525141 PPP1R18Q6NYC8 613 aa14.32□□□□□ -0.12
SMCO4-202ENST00000525141 RUFY4Q6ZNE9 571 aa14.32□□□□□ -0.12
SMCO4-202ENST00000525141 IL27Q8NEV9 243 aa14.32□□□□□ -0.12
SMCO4-202ENST00000525141 LMBR1Q8WVP7 490 aa14.32□□□□□ -0.12
SMCO4-202ENST00000525141 PHKBQ93100 1093 aa14.32□□□□□ -0.12
SMCO4-202ENST00000525141 ZBTB10Q96DT7 871 aa14.32□□□□□ -0.12
SMCO4-202ENST00000525141 CDHR1Q96JP9 859 aa14.32□□□□□ -0.12
SMCO4-202ENST00000525141 BACH2Q9BYV9 841 aa14.32□□□□□ -0.12
SMCO4-202ENST00000525141 ZMYND12Q9H0C1 365 aa14.32□□□□□ -0.12
SMCO4-202ENST00000525141 AGO4Q9HCK5 861 aaKnown RBP14.32□□□□□ -0.12
SMCO4-202ENST00000525141 NAP1L2Q9ULW6 460 aaPredicted RBP14.32□□□□□ -0.12
SMCO4-202ENST00000525141 TRANK1O15050 2925 aa14.31□□□□□ -0.12
SMCO4-202ENST00000525141 FAM86B1E9PN63 330 aa14.31□□□□□ -0.12
SMCO4-202ENST00000525141 hCG_1984214I3L0E3 225 aa14.31□□□□□ -0.12
SMCO4-202ENST00000525141 FAM86B2P0C5J1 330 aa14.31□□□□□ -0.12
SMCO4-202ENST00000525141 NEK4P51957 841 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms