RNA–Protein interactions for RNA: ENST00000524654.1

CTSB-207, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-207ENST00000524654 VPS54Q9P1Q0 977 aa12.53□□□□□ -0.4
CTSB-207ENST00000524654 ZNF215Q9UL58 517 aaPredicted RBP12.53□□□□□ -0.4
CTSB-207ENST00000524654 STXBP5LQ9Y2K9 1186 aa12.53□□□□□ -0.4
CTSB-207ENST00000524654 NFASCO94856 1347 aa12.53□□□□□ -0.4
CTSB-207ENST00000524654 CPLX1O14810 134 aa12.52□□□□□ -0.41
CTSB-207ENST00000524654 EIF5BO60841 1220 aaKnown RBP12.52□□□□□ -0.41
CTSB-207ENST00000524654 PARNO95453 639 aaKnown RBP12.52□□□□□ -0.41
CTSB-207ENST00000524654 CXCL10P02778 98 aa12.52□□□□□ -0.41
CTSB-207ENST00000524654 PBX2P40425 430 aa12.52□□□□□ -0.41
CTSB-207ENST00000524654 SSRP1Q08945 709 aaKnown RBP12.52□□□□□ -0.41
CTSB-207ENST00000524654 STK3Q13188 491 aa12.52□□□□□ -0.41
CTSB-207ENST00000524654 TRIM22Q8IYM9 498 aa12.52□□□□□ -0.41
CTSB-207ENST00000524654 CCDC148Q8NFR7 591 aa12.52□□□□□ -0.41
CTSB-207ENST00000524654 BICD2Q8TD16 824 aa12.52□□□□□ -0.41
CTSB-207ENST00000524654 ATP6V0A1Q93050 837 aa12.52□□□□□ -0.41
CTSB-207ENST00000524654 FAM161BQ96MY7 647 aa12.52□□□□□ -0.41
CTSB-207ENST00000524654 SETD4Q9NVD3 440 aa12.52□□□□□ -0.41
CTSB-207ENST00000524654 SLC9A2Q9UBY0 812 aa12.52□□□□□ -0.41
CTSB-207ENST00000524654 TPCN1Q9ULQ1 816 aa12.52□□□□□ -0.41
CTSB-207ENST00000524654 SLC4A7Q9Y6M7 1214 aa12.52□□□□□ -0.41
CTSB-207ENST00000524654 DHX15O43143 795 aaKnown RBP12.51□□□□□ -0.41
CTSB-207ENST00000524654 TREHO43280 583 aa12.51□□□□□ -0.41
CTSB-207ENST00000524654 PFKFB2O60825 505 aa12.51□□□□□ -0.41
CTSB-207ENST00000524654 NBNO60934 754 aa12.51□□□□□ -0.41
CTSB-207ENST00000524654 LGR5O75473 907 aa12.51□□□□□ -0.41
CTSB-207ENST00000524654 DEXIO95424 95 aa12.51□□□□□ -0.41
CTSB-207ENST00000524654 GNAT1P11488 350 aa12.51□□□□□ -0.41
CTSB-207ENST00000524654 ACTN1P12814 892 aa12.51□□□□□ -0.41
CTSB-207ENST00000524654 ZNF76P36508 570 aa12.51□□□□□ -0.41
CTSB-207ENST00000524654 SCRN1Q12765 414 aa12.51□□□□□ -0.41
CTSB-207ENST00000524654 MBTPS1Q14703 1052 aa12.51□□□□□ -0.41
CTSB-207ENST00000524654 ZNF618Q5T7W0 954 aa12.51□□□□□ -0.41
CTSB-207ENST00000524654 RASGRP4Q8TDF6 673 aa12.51□□□□□ -0.41
CTSB-207ENST00000524654 TIFAQ96CG3 184 aa12.51□□□□□ -0.41
CTSB-207ENST00000524654 PCYT2Q99447 389 aa12.51□□□□□ -0.41
CTSB-207ENST00000524654 CDX2Q99626 313 aaPredicted RBP12.51□□□□□ -0.41
CTSB-207ENST00000524654 SDF4Q9BRK5 362 aa12.51□□□□□ -0.41
CTSB-207ENST00000524654 SMARCAD1Q9H4L7 1026 aa12.51□□□□□ -0.41
CTSB-207ENST00000524654 ERAP1Q9NZ08 941 aa12.51□□□□□ -0.41
CTSB-207ENST00000524654 EMSYQ7Z589 1322 aa12.51□□□□□ -0.41
CTSB-207ENST00000524654 NRCAMQ92823 1304 aa12.51□□□□□ -0.41
CTSB-207ENST00000524654 M0R2N6 131 aa12.5□□□□□ -0.41
CTSB-207ENST00000524654 EDIL3O43854 480 aa12.5□□□□□ -0.41
CTSB-207ENST00000524654 BAIAP3O94812 1187 aa12.5□□□□□ -0.41
CTSB-207ENST00000524654 ATG7O95352 703 aa12.5□□□□□ -0.41
CTSB-207ENST00000524654 CCNE2O96020 404 aa12.5□□□□□ -0.41
CTSB-207ENST00000524654 ATP2A2P16615 1042 aaKnown RBP12.5□□□□□ -0.41
CTSB-207ENST00000524654 CIITAP33076 1130 aa12.5□□□□□ -0.41
CTSB-207ENST00000524654 THPOP40225 353 aa12.5□□□□□ -0.41
CTSB-207ENST00000524654 AK2P54819 239 aa12.5□□□□□ -0.41
CTSB-207ENST00000524654 ACTR2P61160 394 aa12.5□□□□□ -0.41
CTSB-207ENST00000524654 ANKRD1Q15327 319 aa12.5□□□□□ -0.41
CTSB-207ENST00000524654 NPY5RQ15761 445 aa12.5□□□□□ -0.41
CTSB-207ENST00000524654 CPLX2Q6PUV4 134 aaKnown RBP12.5□□□□□ -0.41
CTSB-207ENST00000524654 PLA2G4DQ86XP0 818 aa12.5□□□□□ -0.41
CTSB-207ENST00000524654 FAM177A1Q8N128 213 aaPredicted RBP12.5□□□□□ -0.41
CTSB-207ENST00000524654 LMBR1Q8WVP7 490 aa12.5□□□□□ -0.41
CTSB-207ENST00000524654 GLG1Q92896 1179 aa12.5□□□□□ -0.41
CTSB-207ENST00000524654 AIFM3Q96NN9 605 aa12.5□□□□□ -0.41
CTSB-207ENST00000524654 FTOQ9C0B1 505 aaKnown RBP eCLIP12.5□□□□□ -0.413e-19■□□□□ 9.3
CTSB-207ENST00000524654 SLKQ9H2G2 1235 aaPredicted RBP12.5□□□□□ -0.41
CTSB-207ENST00000524654 IGKV6D-21A0A0A0MT36 114 aa12.49□□□□□ -0.41
CTSB-207ENST00000524654 ZBBXA8MT70 800 aa12.49□□□□□ -0.41
CTSB-207ENST00000524654 RSPH10B2B2RC85 870 aa12.49□□□□□ -0.41
CTSB-207ENST00000524654 IPO5O00410 1097 aaKnown RBP12.49□□□□□ -0.41
CTSB-207ENST00000524654 CAND2O75155 1236 aa12.49□□□□□ -0.41
CTSB-207ENST00000524654 CDKL5O76039 1030 aa12.49□□□□□ -0.41
CTSB-207ENST00000524654 RSPH10BP0C881 870 aa12.49□□□□□ -0.41
CTSB-207ENST00000524654 MARK3P27448 753 aa12.49□□□□□ -0.41
CTSB-207ENST00000524654 NLRP5P59047 1200 aa12.49□□□□□ -0.41
CTSB-207ENST00000524654 RAB30Q15771 203 aa12.49□□□□□ -0.41
CTSB-207ENST00000524654 TCTN1Q2MV58 587 aa12.49□□□□□ -0.41
CTSB-207ENST00000524654 MARCH8Q5T0T0 291 aa12.49□□□□□ -0.41
CTSB-207ENST00000524654 CNKSR3Q6P9H4 555 aa12.49□□□□□ -0.41
CTSB-207ENST00000524654 PLPPR4Q7Z2D5 763 aa12.49□□□□□ -0.41
CTSB-207ENST00000524654 DAGLBQ8NCG7 672 aa12.49□□□□□ -0.41
CTSB-207ENST00000524654 PHOSPHO2Q8TCD6 241 aa12.49□□□□□ -0.41
CTSB-207ENST00000524654 LENG9Q96B70 501 aa12.49□□□□□ -0.41
CTSB-207ENST00000524654 ZNF576Q9H609 170 aa12.49□□□□□ -0.41
CTSB-207ENST00000524654 MSRAQ9UJ68 235 aa12.49□□□□□ -0.41
CTSB-207ENST00000524654 PCDHA4Q9UN74 947 aa12.49□□□□□ -0.41
CTSB-207ENST00000524654 YBX2Q9Y2T7 364 aaKnown RBP12.49□□□□□ -0.41
CTSB-207ENST00000524654 CHD9Q3L8U1 2897 aa12.49□□□□□ -0.41
CTSB-207ENST00000524654 STK36Q9NRP7 1315 aa12.48□□□□□ -0.41
CTSB-207ENST00000524654 MBLAC1A4D2B0 266 aaPredicted RBP12.48□□□□□ -0.41
CTSB-207ENST00000524654 CTDNEP1O95476 244 aa12.48□□□□□ -0.41
CTSB-207ENST00000524654 USP11P51784 963 aa12.48□□□□□ -0.41
CTSB-207ENST00000524654 RABGGTBP53611 331 aa12.48□□□□□ -0.41
CTSB-207ENST00000524654 SETQ01105 290 aaPredicted RBP12.48□□□□□ -0.41
CTSB-207ENST00000524654 PPFIA1Q13136 1202 aa12.48□□□□□ -0.41
CTSB-207ENST00000524654 GRIN2CQ14957 1233 aa12.48□□□□□ -0.41
CTSB-207ENST00000524654 GRIK4Q16099 956 aa12.48□□□□□ -0.41
CTSB-207ENST00000524654 ME3Q16798 604 aa12.48□□□□□ -0.41
CTSB-207ENST00000524654 GALNT17Q6IS24 598 aa12.48□□□□□ -0.41
CTSB-207ENST00000524654 ABHD15Q6UXT9 468 aa12.48□□□□□ -0.41
CTSB-207ENST00000524654 RPAINQ86UA6 219 aa12.48□□□□□ -0.41
CTSB-207ENST00000524654 SLC9A7Q96T83 725 aa12.48□□□□□ -0.41
CTSB-207ENST00000524654 ZNF577Q9BSK1 485 aa12.48□□□□□ -0.41
CTSB-207ENST00000524654 AZI2Q9H6S1 392 aa12.48□□□□□ -0.41
CTSB-207ENST00000524654 TBC1D22BQ9NU19 505 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms