RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 ADAM9Q13443 819 aa12.2□□□□□ -0.46
HDAC9-228ENST00000524023 APOBEC3HQ6NTF7 200 aaKnown RBP12.2□□□□□ -0.46
HDAC9-228ENST00000524023 HHIPL2Q6UWX4 724 aa12.2□□□□□ -0.46
HDAC9-228ENST00000524023 LRRC31Q6UY01 552 aa12.2□□□□□ -0.46
HDAC9-228ENST00000524023 SND1Q7KZF4 910 aaKnown RBP eCLIP12.2□□□□□ -0.46
HDAC9-228ENST00000524023 TBC1D5Q92609 795 aa12.2□□□□□ -0.46
HDAC9-228ENST00000524023 CCDC17Q96LX7 622 aa12.2□□□□□ -0.46
HDAC9-228ENST00000524023 ZC3H12CQ9C0D7 883 aaKnown RBP12.2□□□□□ -0.46
HDAC9-228ENST00000524023 EHD4Q9H223 541 aa12.2□□□□□ -0.46
HDAC9-228ENST00000524023 PITPNM2Q9BZ72 1349 aa12.2□□□□□ -0.46
HDAC9-228ENST00000524023 NAB2Q15742 525 aa12.2□□□□□ -0.46
HDAC9-228ENST00000524023 SLC18A3Q16572 532 aa12.2□□□□□ -0.46
HDAC9-228ENST00000524023 EDRF1Q3B7T1 1238 aa12.2□□□□□ -0.46
HDAC9-228ENST00000524023 CFAP221Q4G0U5 840 aa12.2□□□□□ -0.46
HDAC9-228ENST00000524023 PPP4R3CPQ6ZMV5 832 aa12.2□□□□□ -0.46
HDAC9-228ENST00000524023 ZFPM1Q8IX07 1006 aa12.2□□□□□ -0.46
HDAC9-228ENST00000524023 SLFN12Q8IYM2 578 aa12.2□□□□□ -0.46
HDAC9-228ENST00000524023 TEKT1Q969V4 418 aa12.2□□□□□ -0.46
HDAC9-228ENST00000524023 DHX36Q9H2U1 1008 aaKnown RBP12.2□□□□□ -0.46
HDAC9-228ENST00000524023 DNAJC18Q9H819 358 aa12.2□□□□□ -0.46
HDAC9-228ENST00000524023 LUC7LQ9NQ29 371 aaKnown RBP12.2□□□□□ -0.46
HDAC9-228ENST00000524023 RBM12Q9NTZ6 932 aaKnown RBP12.2□□□□□ -0.46
HDAC9-228ENST00000524023 AIPL1Q9NZN9 384 aa12.2□□□□□ -0.46
HDAC9-228ENST00000524023 RNF14Q9UBS8 474 aa12.2□□□□□ -0.46
HDAC9-228ENST00000524023 POTEFA5A3E0 1075 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 MEIS2O14770 477 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 CETN3O15182 167 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 PALMO75781 387 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 KRT18P05783 430 aaKnown RBP12.19□□□□□ -0.46
HDAC9-228ENST00000524023 POTEIP0CG38 1075 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 TNFRSF8P28908 595 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 EPHB4P54760 987 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 RAPGEF1Q13905 1077 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 CDC37Q16543 378 aaPredicted RBP12.19□□□□□ -0.46
HDAC9-228ENST00000524023 DOK7Q18PE1 504 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 GLE1Q53GS7 698 aaKnown RBP12.19□□□□□ -0.46
HDAC9-228ENST00000524023 FOXR1Q6PIV2 292 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 POTEGQ6S5H5 508 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 POTEEQ6S8J3 1075 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 MOXD1Q6UVY6 613 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.19□□□□□ -0.46
HDAC9-228ENST00000524023 SRLQ86TD4 932 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 DCAF4Q8WV16 495 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 MKL1Q969V6 931 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 MS4A14Q96JA4 679 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 GANQ9H2C0 597 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 LCMT1Q9UIC8 334 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 SIPA1L1O43166 1804 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 ANKRD31Q8N7Z5 1873 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 A0A087X0T9 212 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 RAD21O60216 631 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 FAM228BP0C875 321 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 EEF2P13639 858 aaKnown RBP12.19□□□□□ -0.46
HDAC9-228ENST00000524023 KLRC1P26715 233 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 EPS15P42566 896 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 ARID5AQ03989 594 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 SPIRE1Q08AE8 756 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 KCNH2Q12809 1159 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 SLFN13Q68D06 897 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 C8orf74Q6P047 294 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 EMBQ6PCB8 327 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 FAM133AQ8N9E0 248 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 ETNPPLQ8TBG4 499 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 CRYGNQ8WXF5 182 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 GJD4Q96KN9 370 aaPredicted RBP12.19□□□□□ -0.46
HDAC9-228ENST00000524023 ZHX3Q9H4I2 956 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 PCDHGC5Q9Y5F6 944 aa12.19□□□□□ -0.46
HDAC9-228ENST00000524023 NR2F2P24468 414 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 CASP5P51878 434 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 ARHGAP4P98171 946 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 KLHL30Q0D2K2 578 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 AP3B2Q13367 1082 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 GIT2Q14161 759 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 ASIC2Q16515 512 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 SHROOM1Q2M3G4 852 aaPredicted RBP12.18□□□□□ -0.46
HDAC9-228ENST00000524023 CATSPER3Q86XQ3 398 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 P2RX7Q99572 595 aaKnown RBP12.18□□□□□ -0.46
HDAC9-228ENST00000524023 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.18□□□□□ -0.46
HDAC9-228ENST00000524023 TSPYL1Q9H0U9 437 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 NYAP2Q9P242 653 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 ADAMTS1Q9UHI8 967 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 FEZ2Q9UHY8 353 aaPredicted RBP12.18□□□□□ -0.46
HDAC9-228ENST00000524023 RRP15Q9Y3B9 282 aaKnown RBP12.18□□□□□ -0.46
HDAC9-228ENST00000524023 KIF13BQ9NQT8 1826 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 GOLGA6CA6NDK9 693 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 MYO1CO00159 1063 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 FTCDO95954 541 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 GOLGA6DP0CG33 693 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 PSMC6P62333 389 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 KIAA0753Q2KHM9 967 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 MEI1Q5TIA1 1274 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 DPY19L2P1Q6NXN4 242 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 FAM76AQ8TAV0 307 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 CAVIN3Q969G5 261 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 SH3GL2Q99962 352 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 TRIM34Q9BYJ4 488 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 GOLGA6AQ9NYA3 693 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 HDAC9Q9UKV0 1011 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 TRAF3IP3Q9Y228 551 aa12.18□□□□□ -0.46
HDAC9-228ENST00000524023 FAM196BA6NMK8 535 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms