RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 HOXC8P31273 242 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 TCF7P36402 384 aaPredicted RBP10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 METAP2P50579 478 aaKnown RBP eCLIP10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 PPFIA1Q13136 1202 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 AP3B2Q13367 1082 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 WWC2Q6AWC2 1192 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 TRIM50Q86XT4 487 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 CCDC12Q8WUD4 166 aaPredicted RBP10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 SEPT1Q8WYJ6 367 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 GLG1Q92896 1179 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 RAD9AQ99638 391 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 SDF4Q9BRK5 362 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 AZI2Q9H6S1 392 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 RIC8AQ9NPQ8 531 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 JADE2Q9NQC1 790 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 SETD4Q9NVD3 440 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 ERAP1Q9NZ08 941 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 PCDHA6Q9UN73 950 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 PCDHA8Q9Y5H6 950 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 EYSQ5T1H1 3165 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 CHD7Q9P2D1 2997 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 TREHO43280 583 aa10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 NEFLP07196 543 aa10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 CENPBP07199 599 aaPredicted RBP10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 PSMA5P28066 241 aa10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 HOXD11P31277 338 aaPredicted RBP10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 DEFB103AP81534 67 aa10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 EXOSC10Q01780 885 aaKnown RBP10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 AKAP17AQ02040 695 aaKnown RBP10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 TAP1Q03518 808 aa10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 MCTP2Q6DN12 878 aa10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 TRAF7Q6Q0C0 670 aa10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 BLOC1S2Q6QNY1 142 aa10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 MYOCDQ8IZQ8 938 aa10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 LMBR1Q8WVP7 490 aa10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 APBB2Q92870 758 aa10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 WNT8BQ93098 351 aa10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 TCEANC2Q96MN5 208 aa10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 JAKMIP1Q96N16 626 aaKnown RBP10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 RNPEPQ9H4A4 650 aa10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 SMARCAD1Q9H4L7 1026 aa10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 CERS4Q9HA82 394 aa10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 BARHL2Q9NY43 387 aa10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 PKD2L1Q9P0L9 805 aa10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 TCEAL9Q9UHQ7 104 aa10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 UBIAD1Q9Y5Z9 338 aa10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 V9GY48 417 aaPredicted RBP10.13□□□□□ -0.79
CTNNA1-240ENST00000523912 STXBP3O00186 592 aa10.12□□□□□ -0.79
CTNNA1-240ENST00000523912 MARK3P27448 753 aa10.12□□□□□ -0.79
CTNNA1-240ENST00000523912 ZNF76P36508 570 aa10.12□□□□□ -0.79
CTNNA1-240ENST00000523912 HIC1Q14526 733 aa10.12□□□□□ -0.79
CTNNA1-240ENST00000523912 MBTPS1Q14703 1052 aa10.12□□□□□ -0.79
CTNNA1-240ENST00000523912 GPNMBQ14956 572 aa10.12□□□□□ -0.79
CTNNA1-240ENST00000523912 GRIK4Q16099 956 aa10.12□□□□□ -0.79
CTNNA1-240ENST00000523912 CEP55Q53EZ4 464 aa10.12□□□□□ -0.79
CTNNA1-240ENST00000523912 FAM117BQ6P1L5 589 aa10.12□□□□□ -0.79
CTNNA1-240ENST00000523912 SKAP1Q86WV1 359 aa10.12□□□□□ -0.79
CTNNA1-240ENST00000523912 RASEFQ8IZ41 740 aa10.12□□□□□ -0.79
CTNNA1-240ENST00000523912 HLA-CQ95604 372 aa10.12□□□□□ -0.79
CTNNA1-240ENST00000523912 TGS1Q96RS0 853 aaKnown RBP10.12□□□□□ -0.79
CTNNA1-240ENST00000523912 YME1L1Q96TA2 773 aa10.12□□□□□ -0.79
CTNNA1-240ENST00000523912 ANO3Q9BYT9 981 aa10.12□□□□□ -0.79
CTNNA1-240ENST00000523912 BCAS3Q9H6U6 928 aa10.12□□□□□ -0.79
CTNNA1-240ENST00000523912 SLC9A2Q9UBY0 812 aa10.12□□□□□ -0.79
CTNNA1-240ENST00000523912 TUBE1Q9UJT0 475 aa10.12□□□□□ -0.79
CTNNA1-240ENST00000523912 BRPF3Q9ULD4 1205 aa10.12□□□□□ -0.79
CTNNA1-240ENST00000523912 TRPC6Q9Y210 931 aa10.12□□□□□ -0.79
CTNNA1-240ENST00000523912 INSL6Q9Y581 213 aa10.12□□□□□ -0.79
CTNNA1-240ENST00000523912 NFASCO94856 1347 aa10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 SCN5AQ14524 2016 aa10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 SMCO2A6NFE2 343 aa10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 RRN3P2A6NIE6 340 aa10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 M0QZ92 97 aa10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 GPR37L1O60883 481 aa10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 HSPA4P34932 840 aa10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 SREBF1P36956 1147 aa10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 KCNQ1P51787 676 aa10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 TFF2Q03403 129 aa10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 COL9A3Q14050 684 aaPredicted RBP10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 ADCK5Q3MIX3 580 aa10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 PLEKHG4Q58EX7 1191 aa10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 RPAINQ86UA6 219 aa10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 CCDC148Q8NFR7 591 aa10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 DBF4BQ8NFT6 615 aa10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 TET1Q8NFU7 2136 aa10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 BICD2Q8TD16 824 aa10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 MXRA8Q9BRK3 442 aa10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 IFIH1Q9BYX4 1025 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 C6orf50Q9HD87 102 aa10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 KCNH7Q9NS40 1196 aa10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 HCN4Q9Y3Q4 1203 aa10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 TCF20Q9UGU0 1960 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 PIEZO1Q92508 2521 aa10.11□□□□□ -0.79
CTNNA1-240ENST00000523912 BRWD1Q9NSI6 2320 aa10.1□□□□□ -0.79
CTNNA1-240ENST00000523912 GSTTP1A0A1W2PQM5 241 aa10.1□□□□□ -0.79
CTNNA1-240ENST00000523912 LCHNA4D1U4 455 aa10.1□□□□□ -0.79
CTNNA1-240ENST00000523912 LINC01553A4QN01 128 aa10.1□□□□□ -0.79
CTNNA1-240ENST00000523912 EPOPA6NHQ4 379 aa10.1□□□□□ -0.79
CTNNA1-240ENST00000523912 BACH1O14867 736 aa10.1□□□□□ -0.79
CTNNA1-240ENST00000523912 LPXNO60711 386 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms