RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 GLRX3O76003 335 aaKnown RBP7.95□□□□□ -1.14
CPNE3-207ENST00000523588 FAHP16930 419 aa7.95□□□□□ -1.14
CPNE3-207ENST00000523588 YBX3P16989 372 aaKnown RBP eCLIP7.95□□□□□ -1.14
CPNE3-207ENST00000523588 NKX3-2P78367 333 aa7.95□□□□□ -1.14
CPNE3-207ENST00000523588 PAN2Q504Q3 1202 aaKnown RBP7.95□□□□□ -1.14
CPNE3-207ENST00000523588 CIAPIN1Q6FI81 312 aa7.95□□□□□ -1.14
CPNE3-207ENST00000523588 FSTL4Q6MZW2 842 aa7.95□□□□□ -1.14
CPNE3-207ENST00000523588 PROSER1Q86XN7 944 aa7.95□□□□□ -1.14
CPNE3-207ENST00000523588 DHX37Q8IY37 1157 aaKnown RBP7.95□□□□□ -1.14
CPNE3-207ENST00000523588 NIM1KQ8IY84 436 aa7.95□□□□□ -1.14
CPNE3-207ENST00000523588 LRRC56Q8IYG6 542 aaPredicted RBP7.95□□□□□ -1.14
CPNE3-207ENST00000523588 TOX2Q96NM4 488 aa7.95□□□□□ -1.14
CPNE3-207ENST00000523588 SAMD15Q9P1V8 674 aa7.95□□□□□ -1.14
CPNE3-207ENST00000523588 PLAAQ9Y263 795 aa7.95□□□□□ -1.14
CPNE3-207ENST00000523588 PMF1-BGLAPU3KQ54 211 aa7.95□□□□□ -1.14
CPNE3-207ENST00000523588 NUAK1O60285 661 aa7.94□□□□□ -1.14
CPNE3-207ENST00000523588 CAP1Q01518 475 aa7.94□□□□□ -1.14
CPNE3-207ENST00000523588 DLX2Q07687 328 aaPredicted RBP7.94□□□□□ -1.14
CPNE3-207ENST00000523588 DDX53Q86TM3 631 aaKnown RBP7.94□□□□□ -1.14
CPNE3-207ENST00000523588 NOSTRINQ8IVI9 506 aa7.94□□□□□ -1.14
CPNE3-207ENST00000523588 C11orf84Q9BUA3 381 aaPredicted RBP7.94□□□□□ -1.14
CPNE3-207ENST00000523588 PCDH18Q9HCL0 1135 aa7.94□□□□□ -1.14
CPNE3-207ENST00000523588 RBPJLQ9UBG7 517 aa7.94□□□□□ -1.14
CPNE3-207ENST00000523588 M0R2C6 588 aa7.93□□□□□ -1.14
CPNE3-207ENST00000523588 CLASP2O75122 1294 aaKnown RBP7.93□□□□□ -1.14
CPNE3-207ENST00000523588 JMJD7P0C870 316 aa7.93□□□□□ -1.14
CPNE3-207ENST00000523588 PTPN1P18031 435 aaKnown RBP7.93□□□□□ -1.14
CPNE3-207ENST00000523588 ITGA1P56199 1179 aa7.93□□□□□ -1.14
CPNE3-207ENST00000523588 SEC23AQ15436 765 aa7.93□□□□□ -1.14
CPNE3-207ENST00000523588 VWA3BQ502W6 1294 aa7.93□□□□□ -1.14
CPNE3-207ENST00000523588 TM4SF20Q53R12 229 aa7.93□□□□□ -1.14
CPNE3-207ENST00000523588 BTBD8Q5XKL5 378 aa7.93□□□□□ -1.14
CPNE3-207ENST00000523588 CDCA2Q69YH5 1023 aaPredicted RBP7.93□□□□□ -1.14
CPNE3-207ENST00000523588 OTOP1Q7RTM1 612 aa7.93□□□□□ -1.14
CPNE3-207ENST00000523588 STK32CQ86UX6 486 aa7.93□□□□□ -1.14
CPNE3-207ENST00000523588 LRRTM3Q86VH5 581 aa7.93□□□□□ -1.14
CPNE3-207ENST00000523588 SPATA6Q9NWH7 488 aaPredicted RBP7.93□□□□□ -1.14
CPNE3-207ENST00000523588 ATP23Q9Y6H3 246 aa7.93□□□□□ -1.14
CPNE3-207ENST00000523588 ADAMTS20P59510 1910 aa7.92□□□□□ -1.14
CPNE3-207ENST00000523588 TRAF5O00463 557 aa7.92□□□□□ -1.14
CPNE3-207ENST00000523588 FFAR3O14843 346 aa7.92□□□□□ -1.14
CPNE3-207ENST00000523588 POU3F2P20265 443 aaPredicted RBP7.92□□□□□ -1.14
CPNE3-207ENST00000523588 AFF3P51826 1226 aaKnown RBP7.92□□□□□ -1.14
CPNE3-207ENST00000523588 GYS2P54840 703 aa7.92□□□□□ -1.14
CPNE3-207ENST00000523588 ADAM9Q13443 819 aa7.92□□□□□ -1.14
CPNE3-207ENST00000523588 PIK3R6Q5UE93 754 aa7.92□□□□□ -1.14
CPNE3-207ENST00000523588 SAPCD2Q86UD0 394 aa7.92□□□□□ -1.14
CPNE3-207ENST00000523588 DDX1Q92499 740 aaKnown RBP7.92□□□□□ -1.14
CPNE3-207ENST00000523588 ZBTB8AQ96BR9 441 aa7.92□□□□□ -1.14
CPNE3-207ENST00000523588 MFSD3Q96ES6 412 aa7.92□□□□□ -1.14
CPNE3-207ENST00000523588 MTFR1LQ9H019 292 aa7.92□□□□□ -1.14
CPNE3-207ENST00000523588 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.91□□□□□ -1.14
CPNE3-207ENST00000523588 CBX4O00257 560 aa7.91□□□□□ -1.14
CPNE3-207ENST00000523588 C4BPAP04003 597 aaKnown RBP7.91□□□□□ -1.14
CPNE3-207ENST00000523588 ZBTB48P10074 688 aaPredicted RBP7.91□□□□□ -1.14
CPNE3-207ENST00000523588 JAG1P78504 1218 aa7.91□□□□□ -1.14
CPNE3-207ENST00000523588 SMAD4Q13485 552 aaKnown RBP7.91□□□□□ -1.14
CPNE3-207ENST00000523588 CFAP100Q494V2 611 aa7.91□□□□□ -1.14
CPNE3-207ENST00000523588 LIPIQ6XZB0 460 aa7.91□□□□□ -1.14
CPNE3-207ENST00000523588 UBE2R2Q712K3 238 aaPredicted RBP7.91□□□□□ -1.14
CPNE3-207ENST00000523588 TMEM151BQ8IW70 566 aa7.91□□□□□ -1.14
CPNE3-207ENST00000523588 C2orf69Q8N8R5 385 aa7.91□□□□□ -1.14
CPNE3-207ENST00000523588 KYQ8NBH2 561 aa7.91□□□□□ -1.14
CPNE3-207ENST00000523588 WNK4Q96J92 1243 aa7.91□□□□□ -1.14
CPNE3-207ENST00000523588 ORAI3Q9BRQ5 295 aa7.91□□□□□ -1.14
CPNE3-207ENST00000523588 A0A087X0B3 334 aa7.9□□□□□ -1.14
CPNE3-207ENST00000523588 SLC12A8A0AV02 714 aa7.9□□□□□ -1.14
CPNE3-207ENST00000523588 GJA4P35212 333 aa7.9□□□□□ -1.14
CPNE3-207ENST00000523588 THBS2P35442 1172 aa7.9□□□□□ -1.14
CPNE3-207ENST00000523588 FLT3P36888 993 aa7.9□□□□□ -1.14
CPNE3-207ENST00000523588 RTP5Q14D33 572 aa7.9□□□□□ -1.14
CPNE3-207ENST00000523588 CD276Q5ZPR3 534 aa7.9□□□□□ -1.14
CPNE3-207ENST00000523588 CPZQ66K79 652 aa7.9□□□□□ -1.14
CPNE3-207ENST00000523588 CNNM4Q6P4Q7 775 aa7.9□□□□□ -1.14
CPNE3-207ENST00000523588 TMC5Q6UXY8 1006 aa7.9□□□□□ -1.14
CPNE3-207ENST00000523588 TP53I13Q8NBR0 393 aaPredicted RBP7.9□□□□□ -1.14
CPNE3-207ENST00000523588 CHST14Q8NCH0 376 aa7.9□□□□□ -1.14
CPNE3-207ENST00000523588 ZNF526Q8TF50 670 aaPredicted RBP7.9□□□□□ -1.14
CPNE3-207ENST00000523588 DLG3Q92796 817 aa7.9□□□□□ -1.14
CPNE3-207ENST00000523588 TARS2Q9BW92 718 aaKnown RBP7.9□□□□□ -1.14
CPNE3-207ENST00000523588 RIC8BQ9NVN3 520 aa7.9□□□□□ -1.14
CPNE3-207ENST00000523588 B3GALT1Q9Y5Z6 326 aa7.9□□□□□ -1.14
CPNE3-207ENST00000523588 CADPSQ9ULU8 1353 aa7.89□□□□□ -1.15
CPNE3-207ENST00000523588 SH3D21A4FU49 640 aa7.89□□□□□ -1.15
CPNE3-207ENST00000523588 SCDO00767 359 aa7.89□□□□□ -1.15
CPNE3-207ENST00000523588 SMARCA5O60264 1052 aaPredicted RBP7.89□□□□□ -1.15
CPNE3-207ENST00000523588 DBPQ10586 325 aaPredicted RBP7.89□□□□□ -1.15
CPNE3-207ENST00000523588 VMACQ2NL98 169 aa7.89□□□□□ -1.15
CPNE3-207ENST00000523588 TCERG1LQ5VWI1 586 aa7.89□□□□□ -1.15
CPNE3-207ENST00000523588 EGFLAMQ63HQ2 1017 aa7.89□□□□□ -1.15
CPNE3-207ENST00000523588 EP400NLQ6ZTU2 488 aa7.89□□□□□ -1.15
CPNE3-207ENST00000523588 TTLL6Q8N841 843 aa7.89□□□□□ -1.15
CPNE3-207ENST00000523588 LINC01356Q8N9X3 169 aa7.89□□□□□ -1.15
CPNE3-207ENST00000523588 ZSCAN18Q8TBC5 510 aaPredicted RBP7.89□□□□□ -1.15
CPNE3-207ENST00000523588 GSG1L2A8MUP6 293 aa7.88□□□□□ -1.15
CPNE3-207ENST00000523588 PCBP1Q15365 356 aaKnown RBP eCLIP7.88□□□□□ -1.15
CPNE3-207ENST00000523588 ARHGAP44Q17R89 818 aa7.88□□□□□ -1.15
CPNE3-207ENST00000523588 PRR31Q5SQ13 230 aa7.88□□□□□ -1.15
CPNE3-207ENST00000523588 LCNL1Q6ZST4 164 aa7.88□□□□□ -1.15
CPNE3-207ENST00000523588 ADGRG2Q8IZP9 1017 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms