RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-222	ENST00000523555	ZBTB10	Q96DT7	871 aa		10.86	□□□□□ -0.67
PABPC1-222	ENST00000523555	OSBPL7	Q9BZF2	842 aa		10.86	□□□□□ -0.67
PABPC1-222	ENST00000523555	RNPEP	Q9H4A4	650 aa		10.86	□□□□□ -0.67
PABPC1-222	ENST00000523555	EHMT1	Q9H9B1	1298 aa		10.86	□□□□□ -0.67
PABPC1-222	ENST00000523555	DHX15	O43143	795 aa	Known RBP	10.85	□□□□□ -0.67
PABPC1-222	ENST00000523555	TREH	O43280	583 aa		10.85	□□□□□ -0.67
PABPC1-222	ENST00000523555	JAK2	O60674	1132 aa		10.85	□□□□□ -0.67
PABPC1-222	ENST00000523555	CCNE2	O96020	404 aa		10.85	□□□□□ -0.67
PABPC1-222	ENST00000523555	CYP3A4	P08684	503 aa		10.85	□□□□□ -0.67
PABPC1-222	ENST00000523555	MARK3	P27448	753 aa		10.85	□□□□□ -0.67
PABPC1-222	ENST00000523555	GNA11	P29992	359 aa		10.85	□□□□□ -0.67
PABPC1-222	ENST00000523555	OTOP2	Q7RTS6	562 aa		10.85	□□□□□ -0.67
PABPC1-222	ENST00000523555	PLA2G4D	Q86XP0	818 aa		10.85	□□□□□ -0.67
PABPC1-222	ENST00000523555	TRIM22	Q8IYM9	498 aa		10.85	□□□□□ -0.67
PABPC1-222	ENST00000523555	CCDC148	Q8NFR7	591 aa		10.85	□□□□□ -0.67
PABPC1-222	ENST00000523555	CCDC12	Q8WUD4	166 aa	Predicted RBP	10.85	□□□□□ -0.67
PABPC1-222	ENST00000523555	GTF3C6	Q969F1	213 aa		10.85	□□□□□ -0.67
PABPC1-222	ENST00000523555	GJA10	Q969M2	543 aa		10.85	□□□□□ -0.67
PABPC1-222	ENST00000523555	LENG9	Q96B70	501 aa		10.85	□□□□□ -0.67
PABPC1-222	ENST00000523555	CDHR1	Q96JP9	859 aa		10.85	□□□□□ -0.67
PABPC1-222	ENST00000523555	GLT8D2	Q9H1C3	349 aa		10.85	□□□□□ -0.67
PABPC1-222	ENST00000523555	JPH1	Q9HDC5	661 aa	Predicted RBP	10.85	□□□□□ -0.67
PABPC1-222	ENST00000523555	SETD4	Q9NVD3	440 aa		10.85	□□□□□ -0.67
PABPC1-222	ENST00000523555	SLC9A2	Q9UBY0	812 aa		10.85	□□□□□ -0.67
PABPC1-222	ENST00000523555	PCDHA4	Q9UN74	947 aa		10.85	□□□□□ -0.67
PABPC1-222	ENST00000523555	NOD1	Q9Y239	953 aa		10.85	□□□□□ -0.67
PABPC1-222	ENST00000523555	NFASC	O94856	1347 aa		10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	STK36	Q9NRP7	1315 aa		10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	C17orf102	A2RUQ5	167 aa		10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	PITPNM1	O00562	1244 aa		10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	MAFG	O15525	162 aa		10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	CKB	P12277	381 aa		10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	ZNF76	P36508	570 aa		10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	PBX2	P40425	430 aa		10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	ACTR2	P61160	394 aa		10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	ADAM17	P78536	824 aa		10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	MBTPS1	Q14703	1052 aa		10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	EARS2	Q5JPH6	523 aa	Known RBP	10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	ZNF618	Q5T7W0	954 aa		10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	PSRC1	Q6PGN9	363 aa	Predicted RBP	10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	GIMAP8	Q8ND71	665 aa	Predicted RBP	10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	NSUN7	Q8NE18	718 aa	Known RBP	10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	OXER1	Q8TDS5	423 aa		10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	TBCK	Q8TEA7	893 aa		10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	LMBR1	Q8WVP7	490 aa		10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	SEPT1	Q8WYJ6	367 aa		10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	FAM161B	Q96MY7	647 aa		10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	PHF20	Q9BVI0	1012 aa		10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	SH3GLB2	Q9NR46	395 aa		10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	CHD9	Q3L8U1	2897 aa		10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	CHD7	Q9P2D1	2997 aa		10.84	□□□□□ -0.67
PABPC1-222	ENST00000523555	SPTBN5	Q9NRC6	3674 aa	Known RBP	10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	FAM205C	A6NFA0	338 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	NBN	O60934	754 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	LGR5	O75473	907 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	TDP2	O95551	362 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	FGB	P02675	491 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	CIITA	P33076	1130 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	FOSB	P53539	338 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	RBL2	Q08999	1139 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	PTK7	Q13308	1070 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	BFSP2	Q13515	415 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	ANKRD1	Q15327	319 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	PRR16	Q569H4	304 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	CPLX2	Q6PUV4	134 aa	Known RBP	10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	RUFY4	Q6ZNE9	571 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	LRRC8D	Q7L1W4	858 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	NIPA1	Q7RTP0	329 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	SERINC5	Q86VE9	423 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	TEX2	Q8IWB9	1127 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	BLID	Q8IZY5	108 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	DEFB123	Q8N688	67 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	DAGLB	Q8NCG7	672 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	CAGE1	Q8TC20	777 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	HERVK_113	Q902F9	699 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	ATP6V0A1	Q93050	837 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	C22orf23	Q9BZE7	217 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	TTYH1	Q9H313	450 aa	Predicted RBP	10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	ORC3	Q9UBD5	711 aa	Predicted RBP	10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	EMSY	Q7Z589	1322 aa		10.83	□□□□□ -0.68
PABPC1-222	ENST00000523555	REV3L	O60673	3130 aa		10.82	□□□□□ -0.68
PABPC1-222	ENST00000523555	IPO5	O00410	1097 aa	Known RBP	10.82	□□□□□ -0.68
PABPC1-222	ENST00000523555	MSH4	O15457	936 aa		10.82	□□□□□ -0.68
PABPC1-222	ENST00000523555	ATG7	O95352	703 aa		10.82	□□□□□ -0.68
PABPC1-222	ENST00000523555	SELP	P16109	830 aa		10.82	□□□□□ -0.68
PABPC1-222	ENST00000523555	ATP4A	P20648	1035 aa		10.82	□□□□□ -0.68
PABPC1-222	ENST00000523555	RBM25	P49756	843 aa	Known RBP	10.82	□□□□□ -0.68
PABPC1-222	ENST00000523555	SMAD3	P84022	425 aa	Known RBP	10.82	□□□□□ -0.68
PABPC1-222	ENST00000523555	MARCH8	Q5T0T0	291 aa		10.82	□□□□□ -0.68
PABPC1-222	ENST00000523555	ABHD15	Q6UXT9	468 aa		10.82	□□□□□ -0.68
PABPC1-222	ENST00000523555	CCDC60	Q8IWA6	550 aa	Predicted RBP	10.82	□□□□□ -0.68
PABPC1-222	ENST00000523555	RETREG2	Q8NC44	543 aa		10.82	□□□□□ -0.68
PABPC1-222	ENST00000523555	BICD2	Q8TD16	824 aa		10.82	□□□□□ -0.68
PABPC1-222	ENST00000523555	AFAP1L1	Q8TED9	768 aa		10.82	□□□□□ -0.68
PABPC1-222	ENST00000523555	TRAPPC12	Q8WVT3	735 aa		10.82	□□□□□ -0.68
PABPC1-222	ENST00000523555	GUCD1	Q96NT3	240 aa		10.82	□□□□□ -0.68
PABPC1-222	ENST00000523555	SDF4	Q9BRK5	362 aa		10.82	□□□□□ -0.68
PABPC1-222	ENST00000523555	ZNF577	Q9BSK1	485 aa		10.82	□□□□□ -0.68
PABPC1-222	ENST00000523555	PBX4	Q9BYU1	374 aa		10.82	□□□□□ -0.68
PABPC1-222	ENST00000523555	MTMR10	Q9NXD2	777 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms