RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 EPAS1Q99814 870 aa9.18□□□□□ -0.94
CSMD1-213ENST00000523488 CUEDC2Q9H467 287 aa9.18□□□□□ -0.94
CSMD1-213ENST00000523488 C17orf75Q9HAS0 396 aa9.18□□□□□ -0.94
CSMD1-213ENST00000523488 LGR6Q9HBX8 967 aa9.18□□□□□ -0.94
CSMD1-213ENST00000523488 EURLQ9NYK6 297 aa9.18□□□□□ -0.94
CSMD1-213ENST00000523488 AIPL1Q9NZN9 384 aa9.18□□□□□ -0.94
CSMD1-213ENST00000523488 EIF4E1BA6NMX2 242 aaKnown RBP9.18□□□□□ -0.94
CSMD1-213ENST00000523488 ZC3H6P61129 1189 aaKnown RBP9.18□□□□□ -0.94
CSMD1-213ENST00000523488 RPL26P61254 145 aaKnown RBP9.18□□□□□ -0.94
CSMD1-213ENST00000523488 MXRA7P84157 204 aa9.18□□□□□ -0.94
CSMD1-213ENST00000523488 ADAM9Q13443 819 aa9.18□□□□□ -0.94
CSMD1-213ENST00000523488 CCDC142Q17RM4 750 aa9.18□□□□□ -0.94
CSMD1-213ENST00000523488 NFXL1Q6ZNB6 911 aa9.18□□□□□ -0.94
CSMD1-213ENST00000523488 LPIN2Q92539 896 aa9.18□□□□□ -0.94
CSMD1-213ENST00000523488 DPH5Q9H2P9 285 aa9.18□□□□□ -0.94
CSMD1-213ENST00000523488 SLITRK6Q9H5Y7 841 aa9.18□□□□□ -0.94
CSMD1-213ENST00000523488 L3MBTL1Q9Y468 752 aa9.18□□□□□ -0.94
CSMD1-213ENST00000523488 GOLGA6L10A0A0M3HER8 536 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 SNX3O60493 162 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 COBLO75128 1261 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 DEXIO95424 95 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 RRAGBQ5VZM2 374 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 EXOC1Q9NV70 894 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.17□□□□□ -0.94
CSMD1-213ENST00000523488 NFU1Q9UMS0 254 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 CTNND2Q9UQB3 1225 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 DUSP10Q9Y6W6 482 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 TNS3Q68CZ2 1445 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 DDX58O95786 925 aaKnown RBP9.17□□□□□ -0.94
CSMD1-213ENST00000523488 ADD2P35612 726 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 INPP5DQ92835 1189 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 RAB17Q9H0T7 212 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 NEUROG2Q9H2A3 272 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 STK32BQ9NY57 414 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 TMCO1Q9UM00 188 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 G3BP2Q9UN86 482 aaKnown RBP9.17□□□□□ -0.94
CSMD1-213ENST00000523488 NR2E3Q9Y5X4 410 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 LRRD1A4D1F6 860 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 PEX11AO75192 247 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 IDO1P14902 403 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 METAP2P50579 478 aaKnown RBP eCLIP9.17□□□□□ -0.94
CSMD1-213ENST00000523488 OCRLQ01968 901 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 GUCY2DQ02846 1103 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 SULT2A1Q06520 285 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 LAMB3Q13751 1172 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 CFAP221Q4G0U5 840 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 TRIM68Q6AZZ1 485 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 UNC13DQ70J99 1090 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 DYDC1Q8WWB3 177 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 INCENPQ9NQS7 918 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 PAPOLBQ9NRJ5 636 aaKnown RBP9.17□□□□□ -0.94
CSMD1-213ENST00000523488 NLRP2Q9NX02 1062 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 LNPEPQ9UIQ6 1025 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 BLOC1S6Q9UL45 172 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 NAV1Q8NEY1 1877 aa9.17□□□□□ -0.94
CSMD1-213ENST00000523488 CPA3P15088 417 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 C10orf76Q5T2E6 689 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 IRGCQ6NXR0 463 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 TRPM8Q7Z2W7 1104 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 CROCCP2Q86T23 111 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 SMYD4Q8IYR2 804 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-213ENST00000523488 DAGLBQ8NCG7 672 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 MTMR8Q96EF0 704 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 CCSER1Q9C0I3 900 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 EPB41L5Q9HCM4 733 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 NLRC4Q9NPP4 1024 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 CHCHD3Q9NX63 227 aaKnown RBP9.16□□□□□ -0.94
CSMD1-213ENST00000523488 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.16□□□□□ -0.94
CSMD1-213ENST00000523488 MAGEC2Q9UBF1 373 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-213ENST00000523488 AMOTL2Q9Y2J4 779 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 AP1G1O43747 822 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 TRIM21P19474 475 aaKnown RBP9.16□□□□□ -0.94
CSMD1-213ENST00000523488 CXCR5P32302 372 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 PRCPP42785 496 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 ALDH5A1P51649 535 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-213ENST00000523488 PMS1P54277 932 aaKnown RBP9.16□□□□□ -0.94
CSMD1-213ENST00000523488 HADHBP55084 474 aaKnown RBP9.16□□□□□ -0.94
CSMD1-213ENST00000523488 SFSWAPQ12872 951 aaKnown RBP9.16□□□□□ -0.94
CSMD1-213ENST00000523488 CBLBQ13191 982 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 LRRC23Q53EV4 343 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-213ENST00000523488 WASHC2DQ5SRD0 308 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 CENPPQ6IPU0 288 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 CGB2Q6NT52 195 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 SRBD1Q8N5C6 995 aaKnown RBP9.16□□□□□ -0.94
CSMD1-213ENST00000523488 CCDC197Q8NCU1 140 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 STKLD1Q8NE28 680 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 PTPRN2Q92932 1015 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 LRRC45Q96CN5 670 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 CYLDQ9NQC7 956 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 PCMTD2Q9NV79 361 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 FBXL5Q9UKA1 691 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 USP20Q9Y2K6 914 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 PSME4Q14997 1843 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 DPPA5A6NC42 116 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 TMEM221A6NGB7 291 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 CCDC188H7C350 402 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 PCK1P35558 622 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 LONP1P36776 959 aaKnown RBP9.16□□□□□ -0.94
CSMD1-213ENST00000523488 DYNC1I2Q13409 638 aaKnown RBP9.16□□□□□ -0.94
CSMD1-213ENST00000523488 NELFBQ8WX92 580 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms