RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 ALADP13716 330 aa29.9■■■□□ 2.38
PVT1-219ENST00000523427 SART3Q15020 963 aaKnown RBP29.9■■■□□ 2.38
PVT1-219ENST00000523427 APBB2Q92870 758 aa29.9■■■□□ 2.38
PVT1-219ENST00000523427 CUL5Q93034 780 aa29.9■■■□□ 2.38
PVT1-219ENST00000523427 PABPC5Q96DU9 382 aaKnown RBP29.9■■■□□ 2.38
PVT1-219ENST00000523427 DOCK5Q9H7D0 1870 aa29.9■■■□□ 2.38
PVT1-219ENST00000523427 PRR33A8MZF0 331 aa29.89■■■□□ 2.38
PVT1-219ENST00000523427 CHRNA1P02708 482 aa29.89■■■□□ 2.38
PVT1-219ENST00000523427 CLUL1Q15846 466 aa29.89■■■□□ 2.38
PVT1-219ENST00000523427 RUFY4Q6ZNE9 571 aa29.89■■■□□ 2.38
PVT1-219ENST00000523427 E7EWF7 191 aa29.88■■■□□ 2.37
PVT1-219ENST00000523427 MARK3P27448 753 aa29.88■■■□□ 2.37
PVT1-219ENST00000523427 NCOA7Q8NI08 942 aa29.88■■■□□ 2.37
PVT1-219ENST00000523427 MYL10Q9BUA6 226 aa29.88■■■□□ 2.37
PVT1-219ENST00000523427 PKD2L1Q9P0L9 805 aa29.88■■■□□ 2.37
PVT1-219ENST00000523427 FRMPD4Q14CM0 1322 aa29.88■■■□□ 2.37
PVT1-219ENST00000523427 ADAM17P78536 824 aa29.87■■■□□ 2.37
PVT1-219ENST00000523427 FAM26DQ5JW98 314 aa29.87■■■□□ 2.37
PVT1-219ENST00000523427 NLRX1Q86UT6 975 aa29.87■■■□□ 2.37
PVT1-219ENST00000523427 GSPT1P15170 499 aaKnown RBP29.86■■■□□ 2.37
PVT1-219ENST00000523427 TCF7P36402 384 aaPredicted RBP29.86■■■□□ 2.37
PVT1-219ENST00000523427 RPAINQ86UA6 219 aa29.86■■■□□ 2.37
PVT1-219ENST00000523427 RRP36Q96EU6 259 aaKnown RBP29.86■■■□□ 2.37
PVT1-219ENST00000523427 FAM50BQ9Y247 325 aa29.86■■■□□ 2.37
PVT1-219ENST00000523427 NRCAMQ92823 1304 aa29.86■■■□□ 2.37
PVT1-219ENST00000523427 GRM6O15303 877 aa29.85■■■□□ 2.37
PVT1-219ENST00000523427 DCXO43602 365 aa29.85■■■□□ 2.37
PVT1-219ENST00000523427 PPFIA1Q13136 1202 aa29.85■■■□□ 2.37
PVT1-219ENST00000523427 PCNX4Q63HM2 1172 aa29.85■■■□□ 2.37
PVT1-219ENST00000523427 ALYREFQ86V81 257 aaKnown RBP29.85■■■□□ 2.37
PVT1-219ENST00000523427 RUFY2Q8WXA3 655 aa29.85■■■□□ 2.37
PVT1-219ENST00000523427 YTHDC1Q96MU7 727 aaKnown RBP29.85■■■□□ 2.37
PVT1-219ENST00000523427 IGFLR1Q9H665 355 aa29.85■■■□□ 2.37
PVT1-219ENST00000523427 ATP9AO75110 1047 aa29.84■■■□□ 2.37
PVT1-219ENST00000523427 PDE4AP27815 886 aa29.84■■■□□ 2.37
PVT1-219ENST00000523427 BMPR1AP36894 532 aa29.84■■■□□ 2.37
PVT1-219ENST00000523427 TTC22Q5TAA0 569 aa29.84■■■□□ 2.37
PVT1-219ENST00000523427 CTCFLQ8NI51 663 aaPredicted RBP29.84■■■□□ 2.37
PVT1-219ENST00000523427 SENP7Q9BQF6 1050 aa29.84■■■□□ 2.37
PVT1-219ENST00000523427 SEC63Q9UGP8 760 aaKnown RBP29.84■■■□□ 2.37
PVT1-219ENST00000523427 MEIS2O14770 477 aa29.83■■■□□ 2.37
PVT1-219ENST00000523427 ANTXR2P58335 489 aa29.83■■■□□ 2.37
PVT1-219ENST00000523427 IGBP1P78318 339 aa29.83■■■□□ 2.37
PVT1-219ENST00000523427 ZP2Q05996 745 aa29.83■■■□□ 2.37
PVT1-219ENST00000523427 BTG3Q14201 252 aaPredicted RBP29.83■■■□□ 2.37
PVT1-219ENST00000523427 LPIN1Q14693 890 aa29.83■■■□□ 2.37
PVT1-219ENST00000523427 RSPH3Q86UC2 560 aa29.83■■■□□ 2.37
PVT1-219ENST00000523427 DNAJB3Q8WWF6 145 aa29.83■■■□□ 2.37
PVT1-219ENST00000523427 GLG1Q92896 1179 aa29.83■■■□□ 2.37
PVT1-219ENST00000523427 C11orf84Q9BUA3 381 aaPredicted RBP29.83■■■□□ 2.37
PVT1-219ENST00000523427 NLRC5Q86WI3 1866 aa29.82■■■□□ 2.37
PVT1-219ENST00000523427 ADGRA3Q8IWK6 1321 aa29.82■■■□□ 2.36
PVT1-219ENST00000523427 ENPP3O14638 875 aa29.82■■■□□ 2.36
PVT1-219ENST00000523427 GRIK4Q16099 956 aa29.82■■■□□ 2.36
PVT1-219ENST00000523427 TAF2Q6P1X5 1199 aa29.82■■■□□ 2.36
PVT1-219ENST00000523427 GIMAP8Q8ND71 665 aaPredicted RBP29.82■■■□□ 2.36
PVT1-219ENST00000523427 IGDCC4Q8TDY8 1250 aa29.82■■■□□ 2.36
PVT1-219ENST00000523427 ZBTB10Q96DT7 871 aa29.82■■■□□ 2.36
PVT1-219ENST00000523427 RB1P06400 928 aa29.81■■■□□ 2.36
PVT1-219ENST00000523427 CHMLP26374 656 aa29.81■■■□□ 2.36
PVT1-219ENST00000523427 GTF2F1P35269 517 aaKnown RBP eCLIP29.81■■■□□ 2.36
PVT1-219ENST00000523427 LTBRP36941 435 aa29.81■■■□□ 2.36
PVT1-219ENST00000523427 DLX2Q07687 328 aaPredicted RBP29.81■■■□□ 2.36
PVT1-219ENST00000523427 HYAL1Q12794 435 aa29.81■■■□□ 2.36
PVT1-219ENST00000523427 XRRA1Q6P2D8 792 aa29.81■■■□□ 2.36
PVT1-219ENST00000523427 ZNF654Q8IZM8 581 aa29.81■■■□□ 2.36
PVT1-219ENST00000523427 CMTR1Q8N1G2 835 aaKnown RBP29.81■■■□□ 2.36
PVT1-219ENST00000523427 EHMT1Q9H9B1 1298 aa29.81■■■□□ 2.36
PVT1-219ENST00000523427 TUBE1Q9UJT0 475 aa29.81■■■□□ 2.36
PVT1-219ENST00000523427 CDY2AQ9Y6F7 541 aa29.81■■■□□ 2.36
PVT1-219ENST00000523427 PIEZO1Q92508 2521 aa29.81■■■□□ 2.36
PVT1-219ENST00000523427 KAT6AQ92794 2004 aa29.81■■■□□ 2.36
PVT1-219ENST00000523427 GSTTP1A0A1W2PQM5 241 aa29.8■■■□□ 2.36
PVT1-219ENST00000523427 KIF5BP33176 963 aa29.8■■■□□ 2.36
PVT1-219ENST00000523427 MGAT3Q09327 533 aa29.8■■■□□ 2.36
PVT1-219ENST00000523427 SEPT1Q8WYJ6 367 aa29.8■■■□□ 2.36
PVT1-219ENST00000523427 SPZ1Q9BXG8 430 aa29.8■■■□□ 2.36
PVT1-219ENST00000523427 FAM49AQ9H0Q0 323 aaPredicted RBP29.8■■■□□ 2.36
PVT1-219ENST00000523427 ALG13Q9NP73 1137 aaKnown RBP29.8■■■□□ 2.36
PVT1-219ENST00000523427 PLEKHA8P1O95397 391 aa29.79■■■□□ 2.36
PVT1-219ENST00000523427 KCNA2P16389 499 aa29.79■■■□□ 2.36
PVT1-219ENST00000523427 RXRAP19793 462 aa29.79■■■□□ 2.36
PVT1-219ENST00000523427 IBSPP21815 317 aaPredicted RBP29.79■■■□□ 2.36
PVT1-219ENST00000523427 COL19A1Q14993 1142 aa29.79■■■□□ 2.36
PVT1-219ENST00000523427 NFXL1Q6ZNB6 911 aa29.79■■■□□ 2.36
PVT1-219ENST00000523427 ADHFE1Q8IWW8 467 aa29.79■■■□□ 2.36
PVT1-219ENST00000523427 ERAP1Q9NZ08 941 aa29.79■■■□□ 2.36
PVT1-219ENST00000523427 PRKAG3Q9UGI9 489 aa29.79■■■□□ 2.36
PVT1-219ENST00000523427 hCG_1642624A0A1W2PR95 340 aa29.78■■■□□ 2.36
PVT1-219ENST00000523427 POTEB3A0JP26 581 aa29.78■■■□□ 2.36
PVT1-219ENST00000523427 C5orf67F2Z3F1 127 aa29.78■■■□□ 2.36
PVT1-219ENST00000523427 PIK3CDO00329 1044 aa29.78■■■□□ 2.36
PVT1-219ENST00000523427 NCK2O43639 380 aa29.78■■■□□ 2.36
PVT1-219ENST00000523427 LINC00271P0C7V0 271 aa29.78■■■□□ 2.36
PVT1-219ENST00000523427 UBE2SQ16763 222 aa29.78■■■□□ 2.36
PVT1-219ENST00000523427 POTEBQ6S5H4 581 aa29.78■■■□□ 2.36
PVT1-219ENST00000523427 RAB11FIP4Q86YS3 637 aa29.78■■■□□ 2.36
PVT1-219ENST00000523427 MB21D2Q8IYB1 491 aaPredicted RBP29.78■■■□□ 2.36
PVT1-219ENST00000523427 GPRASP2Q96D09 838 aa29.78■■■□□ 2.36
PVT1-219ENST00000523427 LMAN2LQ9H0V9 348 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms