RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-225	ENST00000523288	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	PTTG2	Q9NZH5	202 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	HMG20B	Q9P0W2	317 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	SUCLA2	Q9P2R7	463 aa	Predicted RBP	4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	SCOC	Q9UIL1	159 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	LRCH1	Q9Y2L9	728 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	SAMM50	Q9Y512	469 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	PTPRM	P28827	1452 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	TTC34	A8MYJ7	566 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	EIF3F	O00303	357 aa	Predicted RBP	4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	SLC22A1	O15245	554 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	CBFA2T3	O75081	653 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	YEATS4	O95619	227 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	VARS	P26640	1264 aa	Known RBP	4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	PMS2	P54278	862 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	PLOD1	Q02809	727 aa	Predicted RBP	4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	IMMT	Q16891	758 aa	Known RBP	4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	CCDC122	Q5T0U0	273 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	CDC37L1	Q7L3B6	337 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	NLRP9	Q7RTR0	991 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	CCDC24	Q8N4L8	307 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	RBBP8NL	Q8NC74	664 aa	Predicted RBP	4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	CCDC197	Q8NCU1	140 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	FBF1	Q8TES7	1133 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	MRPS27	Q92552	414 aa	Known RBP	4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	INPP5D	Q92835	1189 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	GATA6	Q92908	595 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	RRP36	Q96EU6	259 aa	Known RBP	4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	CTAGE1	Q96RT6	745 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	C14orf93	Q9H972	538 aa	Known RBP	4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	INIP	Q9NRY2	104 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	AATF	Q9NY61	560 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	STX8	Q9UNK0	236 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	MAP3K2	Q9Y2U5	619 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	CAPN6	Q9Y6Q1	641 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	SALL1	Q9NSC2	1324 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	EYS	Q5T1H1	3165 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	TOPAZ1	Q8N9V7	1692 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	ERVV-2	B6SEH9	535 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	RPSA	P08865	295 aa	Known RBP	4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	MTTP	P55157	894 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	UBASH3A	P57075	661 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	GRM2	Q14416	872 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	STK38	Q15208	465 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	TAF11	Q15544	211 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	CNPY1	Q3B7I2	92 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	FAM182B	Q5T319	152 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	FOXB2	Q5VYV0	432 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	BORA	Q6PGQ7	559 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	DDX42	Q86XP3	938 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	CNGA4	Q8IV77	575 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	KCNG4	Q8TDN1	519 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	ATP6V0A1	Q93050	837 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	4.19	□□□□□ -1.74	3e-8	■□□□□ 9.1
FAM49B-225	ENST00000523288	CENPK	Q9BS16	269 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	HAUS4	Q9H6D7	363 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	PREB	Q9HCU5	417 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	HSFX1	Q9UBD0	423 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	JAG2	Q9Y219	1238 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	R3HDM2	Q9Y2K5	976 aa	Known RBP	4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	STXBP5L	Q9Y2K9	1186 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	TBX22	Q9Y458	520 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	L3MBTL1	Q9Y468	752 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	CYP46A1	Q9Y6A2	500 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	PLCH1	Q4KWH8	1693 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	RREB1	Q92766	1687 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	FRMD3	A2A2Y4	597 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	SPDYE5	A6NIY4	337 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	ZNF862	O60290	1169 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	ZBED1	O96006	694 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	ATN1	P54259	1190 aa	Predicted RBP	4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	BPIFB4	P59827	614 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	BNIP1	Q12981	228 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	SYDE2	Q5VT97	1194 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	OLFM4	Q6UX06	510 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	PI16	Q6UXB8	463 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	COPS6	Q7L5N1	327 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	RASEF	Q8IZ41	740 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	ENOX1	Q8TC92	643 aa	Known RBP	4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	XAGE3	Q8WTP9	111 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	WDR60	Q8WVS4	1066 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	FAM129A	Q9BZQ8	928 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	CENPH	Q9H3R5	247 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	TLE6	Q9H808	572 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	POLR3E	Q9NVU0	708 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	GIN1	Q9NXP7	522 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	CYP39A1	Q9NYL5	469 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	DNAJB4	Q9UDY4	337 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	CEP131	Q9UPN4	1083 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	EFR3B	Q9Y2G0	817 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	KDM3B	Q7LBC6	1761 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	LMO7	Q8WWI1	1683 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	NWD1	Q149M9	1564 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	TSPY2	A6NKD2	308 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	TRAFD1	O14545	582 aa	Predicted RBP	4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	RARA	P10276	462 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	GSTT1	P30711	240 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	TNNI2	P48788	182 aa		4.19	□□□□□ -1.74
FAM49B-225	ENST00000523288	PEX5	P50542	639 aa		4.19	□□□□□ -1.74

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