RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 LONP1P36776 959 aaKnown RBP18.31■□□□□ 0.52
LSM1-204ENST00000522515 MIER3Q7Z3K6 550 aa18.31■□□□□ 0.52
LSM1-204ENST00000522515 AFG1LQ8WV93 481 aa18.31■□□□□ 0.52
LSM1-204ENST00000522515 GPR20Q99678 358 aa18.31■□□□□ 0.52
LSM1-204ENST00000522515 RAB34Q9BZG1 259 aa18.31■□□□□ 0.52
LSM1-204ENST00000522515 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.31■□□□□ 0.52
LSM1-204ENST00000522515 DISC1Q9NRI5 854 aa18.31■□□□□ 0.52
LSM1-204ENST00000522515 TCEAL9Q9UHQ7 104 aa18.31■□□□□ 0.52
LSM1-204ENST00000522515 Q9Y3F1 56 aa18.31■□□□□ 0.52
LSM1-204ENST00000522515 GSTTP1A0A1W2PQM5 241 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 CCL5P13501 91 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 LHX8Q68G74 356 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 TMEM87AQ8NBN3 555 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 ARMC5Q96C12 935 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 ZNF333Q96JL9 665 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 MCOLN1Q9GZU1 580 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 SAMM50Q9Y512 469 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 SYNRGQ9UMZ2 1314 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 WDR64B1ANS9 1081 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 NOP56O00567 594 aaKnown RBP18.3■□□□□ 0.52
LSM1-204ENST00000522515 ATG7O95352 703 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 PGK1P00558 417 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 SFNP31947 248 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 CSPP1Q1MSJ5 1256 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 TPRNQ4KMQ1 711 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 ADALQ6DHV7 355 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 SHC4Q6S5L8 630 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 ABHD15Q6UXT9 468 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 USP49Q70CQ1 688 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 SMAP1Q8IYB5 467 aaPredicted RBP18.3■□□□□ 0.52
LSM1-204ENST00000522515 ZNF579Q8NAF0 562 aaKnown RBP18.3■□□□□ 0.52
LSM1-204ENST00000522515 PPTC7Q8NI37 304 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 SEPT1Q8WYJ6 367 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 AK8Q96MA6 479 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 AP5M1Q9H0R1 490 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 XPNPEP3Q9NQH7 507 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 PAK6Q9NQU5 681 aaPredicted RBP18.3■□□□□ 0.52
LSM1-204ENST00000522515 PCDHA10Q9Y5I2 948 aa18.3■□□□□ 0.52
LSM1-204ENST00000522515 A6NJR5 290 aa18.29■□□□□ 0.52
LSM1-204ENST00000522515 CTAGE5O15320 804 aa18.29■□□□□ 0.52
LSM1-204ENST00000522515 MSCO60682 206 aa18.29■□□□□ 0.52
LSM1-204ENST00000522515 TCF7P36402 384 aaPredicted RBP18.29■□□□□ 0.52
LSM1-204ENST00000522515 JAK3P52333 1124 aa18.29■□□□□ 0.52
LSM1-204ENST00000522515 GJA9P57773 515 aa18.29■□□□□ 0.52
LSM1-204ENST00000522515 EPHA7Q15375 998 aa18.29■□□□□ 0.52
LSM1-204ENST00000522515 EPSTI1Q96J88 318 aa18.29■□□□□ 0.52
LSM1-204ENST00000522515 MMTAG2Q9BU76 263 aaKnown RBP18.29■□□□□ 0.52
LSM1-204ENST00000522515 RNF208Q9H0X6 261 aa18.29■□□□□ 0.52
LSM1-204ENST00000522515 UPF3AQ9H1J1 476 aaKnown RBP18.29■□□□□ 0.52
LSM1-204ENST00000522515 MYADML2A6NDP7 307 aa18.28■□□□□ 0.52
LSM1-204ENST00000522515 ADAMTS4O75173 837 aa18.28■□□□□ 0.52
LSM1-204ENST00000522515 PRPF40AO75400 957 aaKnown RBP18.28■□□□□ 0.52
LSM1-204ENST00000522515 MMP3P08254 477 aa18.28■□□□□ 0.52
LSM1-204ENST00000522515 C6orf222P0C671 652 aaPredicted RBP18.28■□□□□ 0.52
LSM1-204ENST00000522515 BEX3Q00994 111 aa18.28■□□□□ 0.52
LSM1-204ENST00000522515 MIS18BP1Q6P0N0 1132 aa18.28■□□□□ 0.52
LSM1-204ENST00000522515 RDM1Q8NG50 284 aa18.28■□□□□ 0.52
LSM1-204ENST00000522515 SYMPKQ92797 1274 aaKnown RBP18.28■□□□□ 0.52
LSM1-204ENST00000522515 EIF2AK1Q9BQI3 630 aaKnown RBP18.28■□□□□ 0.52
LSM1-204ENST00000522515 RGL1Q9NZL6 768 aa18.28■□□□□ 0.52
LSM1-204ENST00000522515 BRCA2P51587 3418 aa18.28■□□□□ 0.52
LSM1-204ENST00000522515 GADD45BO75293 160 aaPredicted RBP18.27■□□□□ 0.52
LSM1-204ENST00000522515 PSAPP07602 524 aa18.27■□□□□ 0.52
LSM1-204ENST00000522515 SUPT20HL2P0C7V6 817 aa18.27■□□□□ 0.52
LSM1-204ENST00000522515 UBA7P41226 1012 aa18.27■□□□□ 0.52
LSM1-204ENST00000522515 CYP4A11Q02928 519 aa18.27■□□□□ 0.52
LSM1-204ENST00000522515 FSCN1Q16658 493 aaKnown RBP18.27■□□□□ 0.52
LSM1-204ENST00000522515 KRT79Q5XKE5 535 aa18.27■□□□□ 0.52
LSM1-204ENST00000522515 SWSAP1Q6NVH7 229 aa18.27■□□□□ 0.52
LSM1-204ENST00000522515 CCDC60Q8IWA6 550 aaPredicted RBP18.27■□□□□ 0.52
LSM1-204ENST00000522515 BANK1Q8NDB2 785 aa18.27■□□□□ 0.52
LSM1-204ENST00000522515 SNX29Q8TEQ0 813 aa18.27■□□□□ 0.52
LSM1-204ENST00000522515 DYDC2Q96IM9 177 aa18.27■□□□□ 0.52
LSM1-204ENST00000522515 DEFB118Q96PH6 123 aa18.27■□□□□ 0.52
LSM1-204ENST00000522515 PCYT2Q99447 389 aa18.27■□□□□ 0.52
LSM1-204ENST00000522515 HSD17B14Q9BPX1 270 aa18.27■□□□□ 0.52
LSM1-204ENST00000522515 IGKV6D-21A0A0A0MT36 114 aa18.26■□□□□ 0.51
LSM1-204ENST00000522515 PPFIA4O75335 1185 aa18.26■□□□□ 0.51
LSM1-204ENST00000522515 MED24O75448 989 aa18.26■□□□□ 0.51
LSM1-204ENST00000522515 SLITRK3O94933 977 aa18.26■□□□□ 0.51
LSM1-204ENST00000522515 SPATA31C1P0DKV0 1188 aa18.26■□□□□ 0.51
LSM1-204ENST00000522515 HOXD8P13378 290 aaPredicted RBP18.26■□□□□ 0.51
LSM1-204ENST00000522515 CPT1AP50416 773 aa18.26■□□□□ 0.51
LSM1-204ENST00000522515 NKX3-2P78367 333 aa18.26■□□□□ 0.51
LSM1-204ENST00000522515 UTP14CQ5TAP6 766 aaKnown RBP18.26■□□□□ 0.51
LSM1-204ENST00000522515 RESP18Q5W5W9 173 aa18.26■□□□□ 0.51
LSM1-204ENST00000522515 CABP7Q86V35 215 aa18.26■□□□□ 0.51
LSM1-204ENST00000522515 CATSPER3Q86XQ3 398 aa18.26■□□□□ 0.51
LSM1-204ENST00000522515 ERMNQ8TAM6 284 aa18.26■□□□□ 0.51
LSM1-204ENST00000522515 SPC25Q9HBM1 224 aa18.26■□□□□ 0.51
LSM1-204ENST00000522515 FRMPD3Q5JV73 1810 aa18.26■□□□□ 0.51
LSM1-204ENST00000522515 A0A1W2PQ27 194 aa18.25■□□□□ 0.51
LSM1-204ENST00000522515 A0A1W2PQ64 194 aa18.25■□□□□ 0.51
LSM1-204ENST00000522515 A0A1W2PQD8 194 aa18.25■□□□□ 0.51
LSM1-204ENST00000522515 GOLGA6L4A6NEF3 574 aa18.25■□□□□ 0.51
LSM1-204ENST00000522515 BACH1O14867 736 aa18.25■□□□□ 0.51
LSM1-204ENST00000522515 P4HBP07237 508 aaKnown RBP18.25■□□□□ 0.51
LSM1-204ENST00000522515 CMA1P23946 247 aa18.25■□□□□ 0.51
LSM1-204ENST00000522515 RPA1P27694 616 aa18.25■□□□□ 0.51
LSM1-204ENST00000522515 CCT6AP40227 531 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms