RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 SYNGAP1Q96PV0 1343 aa9.47□□□□□ -0.89
PVT1-213ENST00000522414 PLXNA1Q9UIW2 1896 aa9.47□□□□□ -0.89
PVT1-213ENST00000522414 A0A0D9SFI3 127 aa9.46□□□□□ -0.9
PVT1-213ENST00000522414 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.46□□□□□ -0.9
PVT1-213ENST00000522414 KIAA0355O15063 1070 aa9.46□□□□□ -0.9
PVT1-213ENST00000522414 CTAGE5O15320 804 aa9.46□□□□□ -0.9
PVT1-213ENST00000522414 IGHDP01880 384 aa9.46□□□□□ -0.9
PVT1-213ENST00000522414 ASGR1P07306 291 aa9.46□□□□□ -0.9
PVT1-213ENST00000522414 FGRP09769 529 aa9.46□□□□□ -0.9
PVT1-213ENST00000522414 C6orf222P0C671 652 aaPredicted RBP9.46□□□□□ -0.9
PVT1-213ENST00000522414 RAG1P15918 1043 aa9.46□□□□□ -0.9
PVT1-213ENST00000522414 ATP4AP20648 1035 aa9.46□□□□□ -0.9
PVT1-213ENST00000522414 HAND2P61296 217 aa9.46□□□□□ -0.9
PVT1-213ENST00000522414 BEX3Q00994 111 aa9.46□□□□□ -0.9
PVT1-213ENST00000522414 NMIQ13287 307 aaPredicted RBP9.46□□□□□ -0.9
PVT1-213ENST00000522414 ALX1Q15699 326 aa9.46□□□□□ -0.9
PVT1-213ENST00000522414 MCMDC2Q4G0Z9 681 aa9.46□□□□□ -0.9
PVT1-213ENST00000522414 NOL8Q76FK4 1167 aaKnown RBP9.46□□□□□ -0.9
PVT1-213ENST00000522414 EEPD1Q7L9B9 569 aa9.46□□□□□ -0.9
PVT1-213ENST00000522414 ZNF589Q86UQ0 364 aaPredicted RBP9.46□□□□□ -0.9
PVT1-213ENST00000522414 FAM160B2Q86V87 743 aa9.46□□□□□ -0.9
PVT1-213ENST00000522414 ACAD9Q9H845 621 aa9.46□□□□□ -0.9
PVT1-213ENST00000522414 A1CFQ9NQ94 594 aaKnown RBP9.46□□□□□ -0.9
PVT1-213ENST00000522414 STARD7Q9NQZ5 370 aa9.46□□□□□ -0.9
PVT1-213ENST00000522414 PDGFCQ9NRA1 345 aa9.46□□□□□ -0.9
PVT1-213ENST00000522414 RNF146Q9NTX7 359 aa9.46□□□□□ -0.9
PVT1-213ENST00000522414 LTBP2Q14767 1821 aa9.46□□□□□ -0.9
PVT1-213ENST00000522414 ASTN1O14525 1302 aa9.46□□□□□ -0.9
PVT1-213ENST00000522414 DCDC2CA8MYV0 355 aa9.45□□□□□ -0.9
PVT1-213ENST00000522414 ORC4O43929 436 aa9.45□□□□□ -0.9
PVT1-213ENST00000522414 HSPD1P10809 573 aaKnown RBP9.45□□□□□ -0.9
PVT1-213ENST00000522414 NOVP48745 357 aa9.45□□□□□ -0.9
PVT1-213ENST00000522414 CDK7P50613 346 aa9.45□□□□□ -0.9
PVT1-213ENST00000522414 GJA9P57773 515 aa9.45□□□□□ -0.9
PVT1-213ENST00000522414 TNFAIP2Q03169 654 aa9.45□□□□□ -0.9
PVT1-213ENST00000522414 RSPO4Q2I0M5 234 aaPredicted RBP9.45□□□□□ -0.9
PVT1-213ENST00000522414 FAM109BQ6ICB4 259 aaPredicted RBP9.45□□□□□ -0.9
PVT1-213ENST00000522414 C16orf59Q7L2K0 433 aa9.45□□□□□ -0.9
PVT1-213ENST00000522414 ANKRD33Q7Z3H0 272 aa9.45□□□□□ -0.9
PVT1-213ENST00000522414 TICAM2Q86XR7 235 aa9.45□□□□□ -0.9
PVT1-213ENST00000522414 NUP133Q8WUM0 1156 aa9.45□□□□□ -0.9
PVT1-213ENST00000522414 RILPL2Q969X0 211 aa9.45□□□□□ -0.9
PVT1-213ENST00000522414 GLT1D1Q96MS3 346 aa9.45□□□□□ -0.9
PVT1-213ENST00000522414 TMEM47Q9BQJ4 181 aa9.45□□□□□ -0.9
PVT1-213ENST00000522414 PCDHGC4Q9Y5F7 938 aa9.45□□□□□ -0.9
PVT1-213ENST00000522414 FRMPD2Q68DX3 1309 aaPredicted RBP9.45□□□□□ -0.9
PVT1-213ENST00000522414 DYNC1LI2O43237 492 aaPredicted RBP9.44□□□□□ -0.9
PVT1-213ENST00000522414 PLA2G6O60733 806 aa9.44□□□□□ -0.9
PVT1-213ENST00000522414 TIMP1P01033 207 aa9.44□□□□□ -0.9
PVT1-213ENST00000522414 TOP1P11387 765 aaKnown RBP9.44□□□□□ -0.9
PVT1-213ENST00000522414 GATA4P43694 442 aa9.44□□□□□ -0.9
PVT1-213ENST00000522414 PLA2G4AP47712 749 aa9.44□□□□□ -0.9
PVT1-213ENST00000522414 BAATQ14032 418 aaPredicted RBP9.44□□□□□ -0.9
PVT1-213ENST00000522414 CCDC96Q2M329 555 aa9.44□□□□□ -0.9
PVT1-213ENST00000522414 TAPT1Q6NXT6 567 aa9.44□□□□□ -0.9
PVT1-213ENST00000522414 CXCL17Q6UXB2 119 aa9.44□□□□□ -0.9
PVT1-213ENST00000522414 NSMFQ6X4W1 530 aa9.44□□□□□ -0.9
PVT1-213ENST00000522414 ZNF592Q92610 1267 aa9.44□□□□□ -0.9
PVT1-213ENST00000522414 PCMTD1Q96MG8 357 aaPredicted RBP9.44□□□□□ -0.9
PVT1-213ENST00000522414 TOX2Q96NM4 488 aa9.44□□□□□ -0.9
PVT1-213ENST00000522414 CDX2Q99626 313 aaPredicted RBP9.44□□□□□ -0.9
PVT1-213ENST00000522414 ZKSCAN3Q9BRR0 538 aa9.44□□□□□ -0.9
PVT1-213ENST00000522414 UPF3AQ9H1J1 476 aaKnown RBP9.44□□□□□ -0.9
PVT1-213ENST00000522414 TTYH1Q9H313 450 aaPredicted RBP9.44□□□□□ -0.9
PVT1-213ENST00000522414 SPC25Q9HBM1 224 aa9.44□□□□□ -0.9
PVT1-213ENST00000522414 CYP39A1Q9NYL5 469 aa9.44□□□□□ -0.9
PVT1-213ENST00000522414 CCPG1Q9ULG6 757 aa9.44□□□□□ -0.9
PVT1-213ENST00000522414 MCM3APO60318 1980 aa9.44□□□□□ -0.9
PVT1-213ENST00000522414 SPTBN5Q9NRC6 3674 aaKnown RBP9.43□□□□□ -0.9
PVT1-213ENST00000522414 GRIN2DO15399 1336 aa9.43□□□□□ -0.9
PVT1-213ENST00000522414 ELP1O95163 1332 aa9.43□□□□□ -0.9
PVT1-213ENST00000522414 ARVCFO00192 962 aa9.43□□□□□ -0.9
PVT1-213ENST00000522414 ICAM1P05362 532 aa9.43□□□□□ -0.9
PVT1-213ENST00000522414 ACRP10323 421 aa9.43□□□□□ -0.9
PVT1-213ENST00000522414 SDSP20132 328 aa9.43□□□□□ -0.9
PVT1-213ENST00000522414 CD33P20138 364 aa9.43□□□□□ -0.9
PVT1-213ENST00000522414 FPGSQ05932 587 aa9.43□□□□□ -0.9
PVT1-213ENST00000522414 TLR1Q15399 786 aa9.43□□□□□ -0.9
PVT1-213ENST00000522414 TKFCQ3LXA3 575 aa9.43□□□□□ -0.9
PVT1-213ENST00000522414 MFSD6Q6ZSS7 791 aa9.43□□□□□ -0.9
PVT1-213ENST00000522414 CHD1LQ86WJ1 897 aa9.43□□□□□ -0.9
PVT1-213ENST00000522414 PLEKHM2Q8IWE5 1019 aa9.43□□□□□ -0.9
PVT1-213ENST00000522414 SMC5Q8IY18 1101 aa9.43□□□□□ -0.9
PVT1-213ENST00000522414 PCSK9Q8NBP7 692 aaKnown RBP9.43□□□□□ -0.9
PVT1-213ENST00000522414 EXOC6Q8TAG9 804 aa9.43□□□□□ -0.9
PVT1-213ENST00000522414 DCAF4Q8WV16 495 aa9.43□□□□□ -0.9
PVT1-213ENST00000522414 RNPC3Q96LT9 517 aaKnown RBP9.43□□□□□ -0.9
PVT1-213ENST00000522414 KRTAP4-12Q9BQ66 201 aa9.43□□□□□ -0.9
PVT1-213ENST00000522414 PLVAPQ9BX97 442 aa9.43□□□□□ -0.9
PVT1-213ENST00000522414 CPVLQ9H3G5 476 aa9.43□□□□□ -0.9
PVT1-213ENST00000522414 RWDD1Q9H446 243 aaPredicted RBP9.43□□□□□ -0.9
PVT1-213ENST00000522414 TBX21Q9UL17 535 aa9.43□□□□□ -0.9
PVT1-213ENST00000522414 GNEQ9Y223 722 aaKnown RBP9.43□□□□□ -0.9
PVT1-213ENST00000522414 DCDC2BA2VCK2 349 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 ASB14A6NK59 587 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 GRXCR1A8MXD5 290 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 NFIBO00712 420 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 GOLGA8HP0CJ92 632 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 MAPTP10636 758 aaKnown RBP9.42□□□□□ -0.9
PVT1-213ENST00000522414 CSF2RAP15509 400 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms