RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 MXRA8Q9BRK3 442 aa23.69■■□□□ 1.38
SDCBP-209ENST00000522243 ANO3Q9BYT9 981 aa23.69■■□□□ 1.38
SDCBP-209ENST00000522243 BARHL2Q9NY43 387 aa23.69■■□□□ 1.38
SDCBP-209ENST00000522243 ABHD14A-ACY1A0A1B0GW23 586 aa23.68■■□□□ 1.38
SDCBP-209ENST00000522243 TLL1O43897 1013 aa23.68■■□□□ 1.38
SDCBP-209ENST00000522243 LGR5O75473 907 aa23.68■■□□□ 1.38
SDCBP-209ENST00000522243 REC8O95072 547 aa23.68■■□□□ 1.38
SDCBP-209ENST00000522243 GNAT1P11488 350 aa23.68■■□□□ 1.38
SDCBP-209ENST00000522243 RPS6KB1P23443 525 aa23.68■■□□□ 1.38
SDCBP-209ENST00000522243 MARK3P27448 753 aa23.68■■□□□ 1.38
SDCBP-209ENST00000522243 RCAN1P53805 252 aa23.68■■□□□ 1.38
SDCBP-209ENST00000522243 IKBKEQ14164 716 aa23.68■■□□□ 1.38
SDCBP-209ENST00000522243 DBF4BQ8NFT6 615 aa23.68■■□□□ 1.38
SDCBP-209ENST00000522243 ZBED2Q9BTP6 218 aa23.68■■□□□ 1.38
SDCBP-209ENST00000522243 OSBPL7Q9BZF2 842 aa23.68■■□□□ 1.38
SDCBP-209ENST00000522243 CDH23Q9H251 3354 aa23.68■■□□□ 1.38
SDCBP-209ENST00000522243 hCG_1984214I3L0E3 225 aa23.67■■□□□ 1.38
SDCBP-209ENST00000522243 NEFLP07196 543 aa23.67■■□□□ 1.38
SDCBP-209ENST00000522243 ARP10275 920 aa23.67■■□□□ 1.38
SDCBP-209ENST00000522243 TAP1Q03518 808 aa23.67■■□□□ 1.38
SDCBP-209ENST00000522243 SPRED2Q7Z698 418 aa23.67■■□□□ 1.38
SDCBP-209ENST00000522243 MICALL1Q8N3F8 863 aa23.67■■□□□ 1.38
SDCBP-209ENST00000522243 ZNF713Q8N859 430 aaPredicted RBP23.67■■□□□ 1.38
SDCBP-209ENST00000522243 LMBR1Q8WVP7 490 aa23.67■■□□□ 1.38
SDCBP-209ENST00000522243 KCNH7Q9NS40 1196 aa23.67■■□□□ 1.38
SDCBP-209ENST00000522243 CCDC196A0A1B0GTZ2 297 aa23.66■■□□□ 1.38
SDCBP-209ENST00000522243 LCHNA4D1U4 455 aa23.66■■□□□ 1.38
SDCBP-209ENST00000522243 EPOPA6NHQ4 379 aa23.66■■□□□ 1.38
SDCBP-209ENST00000522243 MAFGO15525 162 aa23.66■■□□□ 1.38
SDCBP-209ENST00000522243 PPFIA3O75145 1194 aa23.66■■□□□ 1.38
SDCBP-209ENST00000522243 FOSP01100 380 aaPredicted RBP23.66■■□□□ 1.38
SDCBP-209ENST00000522243 ADAM17P78536 824 aa23.66■■□□□ 1.38
SDCBP-209ENST00000522243 PFKFB3Q16875 520 aaPredicted RBP23.66■■□□□ 1.38
SDCBP-209ENST00000522243 JAKMIP3Q5VZ66 844 aa23.66■■□□□ 1.38
SDCBP-209ENST00000522243 FAM117BQ6P1L5 589 aa23.66■■□□□ 1.38
SDCBP-209ENST00000522243 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.66■■□□□ 1.38
SDCBP-209ENST00000522243 ARNTL2Q8WYA1 636 aa23.66■■□□□ 1.38
SDCBP-209ENST00000522243 GLG1Q92896 1179 aa23.66■■□□□ 1.38
SDCBP-209ENST00000522243 EMSYQ7Z589 1322 aa23.65■■□□□ 1.38
SDCBP-209ENST00000522243 CLK2P49760 499 aaKnown RBP23.65■■□□□ 1.38
SDCBP-209ENST00000522243 JPH1Q9HDC5 661 aaPredicted RBP23.65■■□□□ 1.38
SDCBP-209ENST00000522243 NRCAMQ92823 1304 aa23.64■■□□□ 1.38
SDCBP-209ENST00000522243 MICAL3Q7RTP6 2002 aa23.64■■□□□ 1.38
SDCBP-209ENST00000522243 ADAMTS3O15072 1205 aa23.64■■□□□ 1.37
SDCBP-209ENST00000522243 SCG2P13521 617 aa23.64■■□□□ 1.37
SDCBP-209ENST00000522243 PSMA5P28066 241 aa23.64■■□□□ 1.37
SDCBP-209ENST00000522243 PPFIA1Q13136 1202 aa23.64■■□□□ 1.37
SDCBP-209ENST00000522243 AP3B2Q13367 1082 aa23.64■■□□□ 1.37
SDCBP-209ENST00000522243 PHKBQ93100 1093 aa23.64■■□□□ 1.37
SDCBP-209ENST00000522243 ERAP1Q9NZ08 941 aa23.64■■□□□ 1.37
SDCBP-209ENST00000522243 SLC9A2Q9UBY0 812 aa23.64■■□□□ 1.37
SDCBP-209ENST00000522243 EFCAB14O75071 495 aa23.63■■□□□ 1.37
SDCBP-209ENST00000522243 GJB5O95377 273 aa23.63■■□□□ 1.37
SDCBP-209ENST00000522243 ZNF76P36508 570 aa23.63■■□□□ 1.37
SDCBP-209ENST00000522243 SREBF1P36956 1147 aa23.63■■□□□ 1.37
SDCBP-209ENST00000522243 PKN1Q16512 942 aa23.63■■□□□ 1.37
SDCBP-209ENST00000522243 CEP55Q53EZ4 464 aa23.63■■□□□ 1.37
SDCBP-209ENST00000522243 PLEKHG4Q58EX7 1191 aa23.63■■□□□ 1.37
SDCBP-209ENST00000522243 RUFY4Q6ZNE9 571 aa23.63■■□□□ 1.37
SDCBP-209ENST00000522243 PCYT2Q99447 389 aa23.63■■□□□ 1.37
SDCBP-209ENST00000522243 SDF4Q9BRK5 362 aa23.63■■□□□ 1.37
SDCBP-209ENST00000522243 AGXT2Q9BYV1 514 aa23.63■■□□□ 1.37
SDCBP-209ENST00000522243 GLT8D2Q9H1C3 349 aa23.63■■□□□ 1.37
SDCBP-209ENST00000522243 SMARCAD1Q9H4L7 1026 aa23.63■■□□□ 1.37
SDCBP-209ENST00000522243 AGO4Q9HCK5 861 aaKnown RBP23.63■■□□□ 1.37
SDCBP-209ENST00000522243 PRPF3O43395 683 aaKnown RBP23.62■■□□□ 1.37
SDCBP-209ENST00000522243 CAND2O75155 1236 aa23.62■■□□□ 1.37
SDCBP-209ENST00000522243 IGBP1P78318 339 aa23.62■■□□□ 1.37
SDCBP-209ENST00000522243 CCT2P78371 535 aaKnown RBP23.62■■□□□ 1.37
SDCBP-209ENST00000522243 GRIK4Q16099 956 aa23.62■■□□□ 1.37
SDCBP-209ENST00000522243 MYOCDQ8IZQ8 938 aa23.62■■□□□ 1.37
SDCBP-209ENST00000522243 UIMC1Q96RL1 719 aa23.62■■□□□ 1.37
SDCBP-209ENST00000522243 DDX39AO00148 427 aaKnown RBP23.61■■□□□ 1.37
SDCBP-209ENST00000522243 ACTR2P61160 394 aa23.61■■□□□ 1.37
SDCBP-209ENST00000522243 ITGB3BPQ13352 177 aaPredicted RBP23.61■■□□□ 1.37
SDCBP-209ENST00000522243 KRT40Q6A162 431 aa23.61■■□□□ 1.37
SDCBP-209ENST00000522243 TEX2Q8IWB9 1127 aa23.61■■□□□ 1.37
SDCBP-209ENST00000522243 FBXL16Q8N461 479 aa23.61■■□□□ 1.37
SDCBP-209ENST00000522243 SEPT8Q92599 483 aa23.61■■□□□ 1.37
SDCBP-209ENST00000522243 ZBTB10Q96DT7 871 aa23.61■■□□□ 1.37
SDCBP-209ENST00000522243 RAD9AQ99638 391 aa23.61■■□□□ 1.37
SDCBP-209ENST00000522243 NCOA5Q9HCD5 579 aaKnown RBP23.61■■□□□ 1.37
SDCBP-209ENST00000522243 EYSQ5T1H1 3165 aa23.61■■□□□ 1.37
SDCBP-209ENST00000522243 NID2Q14112 1375 aa23.61■■□□□ 1.37
SDCBP-209ENST00000522243 SIP14410 1827 aa23.61■■□□□ 1.37
SDCBP-209ENST00000522243 NFASCO94856 1347 aa23.6■■□□□ 1.37
SDCBP-209ENST00000522243 MEIS1O00470 390 aa23.6■■□□□ 1.37
SDCBP-209ENST00000522243 CHRNA1P02708 482 aa23.6■■□□□ 1.37
SDCBP-209ENST00000522243 AMHP03971 560 aa23.6■■□□□ 1.37
SDCBP-209ENST00000522243 AKAP17AQ02040 695 aaKnown RBP23.6■■□□□ 1.37
SDCBP-209ENST00000522243 NTRK3Q16288 839 aa23.6■■□□□ 1.37
SDCBP-209ENST00000522243 PLA2G4DQ86XP0 818 aa23.6■■□□□ 1.37
SDCBP-209ENST00000522243 ZMYND12Q9H0C1 365 aa23.6■■□□□ 1.37
SDCBP-209ENST00000522243 AZI2Q9H6S1 392 aa23.6■■□□□ 1.37
SDCBP-209ENST00000522243 C6orf50Q9HD87 102 aa23.6■■□□□ 1.37
SDCBP-209ENST00000522243 TUBE1Q9UJT0 475 aa23.6■■□□□ 1.37
SDCBP-209ENST00000522243 COL4A4P53420 1690 aaPredicted RBP23.6■■□□□ 1.37
SDCBP-209ENST00000522243 ESYT2A0FGR8 921 aa23.59■■□□□ 1.37
SDCBP-209ENST00000522243 FAM86B1E9PN63 330 aa23.59■■□□□ 1.37
SDCBP-209ENST00000522243 GTPBP6O43824 516 aaPredicted RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms