RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 NYAP2Q9P242 653 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 PRKAG3Q9UGI9 489 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 GREB1LQ9C091 1923 aaPredicted RBP12.39□□□□□ -0.43
MRPS28-208ENST00000521605 TSPY2A6NKD2 308 aa12.38□□□□□ -0.43
MRPS28-208ENST00000521605 TMEM232C9JQI7 657 aa12.38□□□□□ -0.43
MRPS28-208ENST00000521605 XBP1P17861 261 aa12.38□□□□□ -0.43
MRPS28-208ENST00000521605 NASPP49321 788 aaPredicted RBP12.38□□□□□ -0.43
MRPS28-208ENST00000521605 FOXK2Q01167 660 aa12.38□□□□□ -0.43
MRPS28-208ENST00000521605 TRIM29Q14134 588 aa12.38□□□□□ -0.43
MRPS28-208ENST00000521605 GPNMBQ14956 572 aa12.38□□□□□ -0.43
MRPS28-208ENST00000521605 PTGISQ16647 500 aa12.38□□□□□ -0.43
MRPS28-208ENST00000521605 PTPROQ16827 1216 aa12.38□□□□□ -0.43
MRPS28-208ENST00000521605 ZSCAN23Q3MJ62 389 aa12.38□□□□□ -0.43
MRPS28-208ENST00000521605 TCEAL5Q5H9L2 206 aa12.38□□□□□ -0.43
MRPS28-208ENST00000521605 MUM1L1Q5H9M0 696 aa12.38□□□□□ -0.43
MRPS28-208ENST00000521605 CCDC183Q5T5S1 534 aa12.38□□□□□ -0.43
MRPS28-208ENST00000521605 NFRKBQ6P4R8 1299 aa12.38□□□□□ -0.43
MRPS28-208ENST00000521605 CNKSR3Q6P9H4 555 aa12.38□□□□□ -0.43
MRPS28-208ENST00000521605 ZNF444Q8N0Y2 327 aaPredicted RBP12.38□□□□□ -0.43
MRPS28-208ENST00000521605 BANK1Q8NDB2 785 aa12.38□□□□□ -0.43
MRPS28-208ENST00000521605 MRPL38Q96DV4 380 aaKnown RBP12.38□□□□□ -0.43
MRPS28-208ENST00000521605 SPATA32Q96LK8 384 aa12.38□□□□□ -0.43
MRPS28-208ENST00000521605 FOXP1Q9H334 677 aaPredicted RBP12.38□□□□□ -0.43
MRPS28-208ENST00000521605 MYH4Q9Y623 1939 aa12.37□□□□□ -0.43
MRPS28-208ENST00000521605 FIBPO43427 364 aa12.37□□□□□ -0.43
MRPS28-208ENST00000521605 BMP3P12645 472 aa12.37□□□□□ -0.43
MRPS28-208ENST00000521605 TCF15Q12870 199 aa12.37□□□□□ -0.43
MRPS28-208ENST00000521605 TIGD5Q53EQ6 642 aa12.37□□□□□ -0.43
MRPS28-208ENST00000521605 BRDTQ58F21 947 aaPredicted RBP12.37□□□□□ -0.43
MRPS28-208ENST00000521605 SLFN13Q68D06 897 aa12.37□□□□□ -0.43
MRPS28-208ENST00000521605 CAVIN1Q6NZI2 390 aaKnown RBP12.37□□□□□ -0.43
MRPS28-208ENST00000521605 TMTC3Q6ZXV5 915 aa12.37□□□□□ -0.43
MRPS28-208ENST00000521605 LRRC8DQ7L1W4 858 aa12.37□□□□□ -0.43
MRPS28-208ENST00000521605 FERMT3Q86UX7 667 aa12.37□□□□□ -0.43
MRPS28-208ENST00000521605 RNF135Q8IUD6 432 aa12.37□□□□□ -0.43
MRPS28-208ENST00000521605 SUGP1Q8IWZ8 645 aaKnown RBP12.37□□□□□ -0.43
MRPS28-208ENST00000521605 CCDC155Q8N6L0 562 aa12.37□□□□□ -0.43
MRPS28-208ENST00000521605 CTCFLQ8NI51 663 aaPredicted RBP12.37□□□□□ -0.43
MRPS28-208ENST00000521605 KCNG4Q8TDN1 519 aa12.37□□□□□ -0.43
MRPS28-208ENST00000521605 AFAP1L1Q8TED9 768 aa12.37□□□□□ -0.43
MRPS28-208ENST00000521605 PBXIP1Q96AQ6 731 aa12.37□□□□□ -0.43
MRPS28-208ENST00000521605 PABPC5Q96DU9 382 aaKnown RBP12.37□□□□□ -0.43
MRPS28-208ENST00000521605 DDX19AQ9NUU7 478 aaKnown RBP12.37□□□□□ -0.43
MRPS28-208ENST00000521605 CYP39A1Q9NYL5 469 aa12.37□□□□□ -0.43
MRPS28-208ENST00000521605 TMEM63CQ9P1W3 806 aa12.37□□□□□ -0.43
MRPS28-208ENST00000521605 TCHHQ07283 1943 aa12.37□□□□□ -0.43
MRPS28-208ENST00000521605 MYH15Q9Y2K3 1946 aa12.37□□□□□ -0.43
MRPS28-208ENST00000521605 A0A1W2PQ27 194 aa12.36□□□□□ -0.43
MRPS28-208ENST00000521605 A0A1W2PQ64 194 aa12.36□□□□□ -0.43
MRPS28-208ENST00000521605 A0A1W2PQD8 194 aa12.36□□□□□ -0.43
MRPS28-208ENST00000521605 NBNO60934 754 aa12.36□□□□□ -0.43
MRPS28-208ENST00000521605 GADD45BO75293 160 aaPredicted RBP12.36□□□□□ -0.43
MRPS28-208ENST00000521605 SELPP16109 830 aa12.36□□□□□ -0.43
MRPS28-208ENST00000521605 STAT2P52630 851 aa12.36□□□□□ -0.43
MRPS28-208ENST00000521605 TFAP4Q01664 338 aa12.36□□□□□ -0.43
MRPS28-208ENST00000521605 SAFBQ15424 915 aaKnown RBP eCLIP12.36□□□□□ -0.43
MRPS28-208ENST00000521605 HERC4Q5GLZ8 1057 aaPredicted RBP12.36□□□□□ -0.43
MRPS28-208ENST00000521605 MYSM1Q5VVJ2 828 aa12.36□□□□□ -0.43
MRPS28-208ENST00000521605 LRSAM1Q6UWE0 723 aa12.36□□□□□ -0.43
MRPS28-208ENST00000521605 COPS5Q92905 334 aa12.36□□□□□ -0.43
MRPS28-208ENST00000521605 SH3GLB2Q9NR46 395 aa12.36□□□□□ -0.43
MRPS28-208ENST00000521605 TRIP12Q14669 1992 aaPredicted RBP12.36□□□□□ -0.43
MRPS28-208ENST00000521605 ZFHX2Q9C0A1 2572 aaPredicted RBP12.35□□□□□ -0.43
MRPS28-208ENST00000521605 LCTP09848 1927 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 ABHD14A-ACY1A0A1B0GW23 586 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 TMEM221A6NGB7 291 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 M0R296 226 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 PRDM1O75626 825 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 MMP1P03956 469 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 TSPY3P0CV98 308 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 TSPY8P0CW00 308 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 AKAP17AQ02040 695 aaKnown RBP12.35□□□□□ -0.43
MRPS28-208ENST00000521605 PTPN11Q06124 597 aaPredicted RBP12.35□□□□□ -0.43
MRPS28-208ENST00000521605 GPM6BQ13491 265 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 IKBKEQ14164 716 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 GRM4Q14833 912 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 TKFCQ3LXA3 575 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 EPC2Q52LR7 807 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 GDF6Q6KF10 455 aaPredicted RBP12.35□□□□□ -0.43
MRPS28-208ENST00000521605 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.35□□□□□ -0.43
MRPS28-208ENST00000521605 CAGE1Q8TC20 777 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 EDAQ92838 391 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 ATOH1Q92858 354 aaPredicted RBP12.35□□□□□ -0.43
MRPS28-208ENST00000521605 CEP95Q96GE4 821 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 ZKSCAN3Q9BRR0 538 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 SLC26A6Q9BXS9 759 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 KAT14Q9H8E8 782 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.35□□□□□ -0.43
MRPS28-208ENST00000521605 IL17RBQ9NRM6 502 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 SYNPO2Q9UMS6 1093 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 INSL6Q9Y581 213 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 SCN10AQ9Y5Y9 1956 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 ZDBF2Q9HCK1 2354 aa12.35□□□□□ -0.43
MRPS28-208ENST00000521605 MYO15AQ9UKN7 3530 aa12.34□□□□□ -0.43
MRPS28-208ENST00000521605 IGKV6D-41A0A0C4DH26 115 aa12.34□□□□□ -0.43
MRPS28-208ENST00000521605 GOLGA6L4A6NEF3 574 aa12.34□□□□□ -0.43
MRPS28-208ENST00000521605 CSPG5O95196 566 aa12.34□□□□□ -0.43
MRPS28-208ENST00000521605 FDX1P10109 184 aa12.34□□□□□ -0.43
MRPS28-208ENST00000521605 TOP1P11387 765 aaKnown RBP12.34□□□□□ -0.43
MRPS28-208ENST00000521605 ALDH5A1P51649 535 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms