RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 FBXO15Q8NCQ5 510 aaPredicted RBP5.09□□□□□ -1.59
VPS13B-208ENST00000521037 ATXN2LQ8WWM7 1075 aaKnown RBP5.09□□□□□ -1.59
VPS13B-208ENST00000521037 CITED4Q96RK1 184 aa5.09□□□□□ -1.59
VPS13B-208ENST00000521037 UHRF1Q96T88 793 aaPredicted RBP5.09□□□□□ -1.59
VPS13B-208ENST00000521037 P2RX7Q99572 595 aaKnown RBP5.09□□□□□ -1.59
VPS13B-208ENST00000521037 THUMPD2Q9BTF0 503 aaKnown RBP5.09□□□□□ -1.59
VPS13B-208ENST00000521037 CARS2Q9HA77 564 aaKnown RBP5.09□□□□□ -1.59
VPS13B-208ENST00000521037 ZCCHC17Q9NP64 241 aaKnown RBP5.09□□□□□ -1.59
VPS13B-208ENST00000521037 MIS18AQ9NYP9 233 aa5.09□□□□□ -1.59
VPS13B-208ENST00000521037 CPA4Q9UI42 421 aa5.09□□□□□ -1.59
VPS13B-208ENST00000521037 OGDHLQ9ULD0 1010 aa5.09□□□□□ -1.59
VPS13B-208ENST00000521037 MAST2Q6P0Q8 1798 aa5.09□□□□□ -1.6
VPS13B-208ENST00000521037 PRR33A8MZF0 331 aa5.08□□□□□ -1.6
VPS13B-208ENST00000521037 GADD45BO75293 160 aaPredicted RBP5.08□□□□□ -1.6
VPS13B-208ENST00000521037 FOSL2P15408 326 aa5.08□□□□□ -1.6
VPS13B-208ENST00000521037 BMP6P22004 513 aa5.08□□□□□ -1.6
VPS13B-208ENST00000521037 NME2P22392 152 aa5.08□□□□□ -1.6
VPS13B-208ENST00000521037 EPHB4P54760 987 aa5.08□□□□□ -1.6
VPS13B-208ENST00000521037 EIF4A1P60842 406 aaKnown RBP5.08□□□□□ -1.6
VPS13B-208ENST00000521037 PPP2R3AQ06190 1150 aa5.08□□□□□ -1.6
VPS13B-208ENST00000521037 OTUD7BQ6GQQ9 843 aa5.08□□□□□ -1.6
VPS13B-208ENST00000521037 MCM10Q7L590 875 aa5.08□□□□□ -1.6
VPS13B-208ENST00000521037 PPP1R42Q7Z4L9 355 aa5.08□□□□□ -1.6
VPS13B-208ENST00000521037 APOBEC3FQ8IUX4 373 aaKnown RBP5.08□□□□□ -1.6
VPS13B-208ENST00000521037 ANKRD13AQ8IZ07 590 aa5.08□□□□□ -1.6
VPS13B-208ENST00000521037 GIPC2Q8TF65 315 aa5.08□□□□□ -1.6
VPS13B-208ENST00000521037 PRMT6Q96LA8 375 aaPredicted RBP5.08□□□□□ -1.6
VPS13B-208ENST00000521037 NIF3L1Q9GZT8 377 aa5.08□□□□□ -1.6
VPS13B-208ENST00000521037 ATP13A1Q9HD20 1204 aa5.08□□□□□ -1.6
VPS13B-208ENST00000521037 SSU72Q9NP77 194 aaKnown RBP5.08□□□□□ -1.6
VPS13B-208ENST00000521037 ST14Q9Y5Y6 855 aa5.08□□□□□ -1.6
VPS13B-208ENST00000521037 NPIPB6E9PJ23 425 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 NFIBO00712 420 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 ADCY3O60266 1144 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 UFL1O94874 794 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 TFRCP02786 760 aaKnown RBP5.07□□□□□ -1.6
VPS13B-208ENST00000521037 ANXA1P04083 346 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 MYL6BP14649 208 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 NF2P35240 595 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 FLT3LGP49771 235 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 FCGRTP55899 365 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 RPS8P62241 208 aaKnown RBP5.07□□□□□ -1.6
VPS13B-208ENST00000521037 SMAD3P84022 425 aaKnown RBP5.07□□□□□ -1.6
VPS13B-208ENST00000521037 NHLH1Q02575 133 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 RASA3Q14644 834 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 ARHGEF6Q15052 776 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 ZBTB37Q5TC79 503 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 MAP3K21Q5TCX8 1036 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 DTHD1Q6ZMT9 781 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 ANKS1AQ92625 1134 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 HSPA12BQ96MM6 686 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 EYA3Q99504 573 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 ISCA1Q9BUE6 129 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 C1QTNF1Q9BXJ1 281 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.07□□□□□ -1.6
VPS13B-208ENST00000521037 PANK3Q9H999 370 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 MAPK8IP1Q9UQF2 711 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 RRP7AQ9Y3A4 280 aaKnown RBP5.07□□□□□ -1.6
VPS13B-208ENST00000521037 MGAMO43451 1857 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 PLXNB2O15031 1838 aa5.07□□□□□ -1.6
VPS13B-208ENST00000521037 SH3TC1Q8TE82 1336 aa5.06□□□□□ -1.6
VPS13B-208ENST00000521037 ANKRD33BA6NCL7 494 aa5.06□□□□□ -1.6
VPS13B-208ENST00000521037 FAM86C2PA6NEL3 165 aa5.06□□□□□ -1.6
VPS13B-208ENST00000521037 FANCGO15287 622 aa5.06□□□□□ -1.6
VPS13B-208ENST00000521037 SLITRK5O94991 958 aa5.06□□□□□ -1.6
VPS13B-208ENST00000521037 INHBBP09529 407 aa5.06□□□□□ -1.6
VPS13B-208ENST00000521037 XRCC5P13010 732 aaKnown RBP5.06□□□□□ -1.6
VPS13B-208ENST00000521037 CAPN2P17655 700 aa5.06□□□□□ -1.6
VPS13B-208ENST00000521037 ITGB8P26012 769 aa5.06□□□□□ -1.6
VPS13B-208ENST00000521037 GTF2A2P52657 109 aa5.06□□□□□ -1.6
VPS13B-208ENST00000521037 KCNA10Q16322 511 aa5.06□□□□□ -1.6
VPS13B-208ENST00000521037 STRIP1Q5VSL9 837 aa5.06□□□□□ -1.6
VPS13B-208ENST00000521037 MPZL3Q6UWV2 235 aa5.06□□□□□ -1.6
VPS13B-208ENST00000521037 PI16Q6UXB8 463 aa5.06□□□□□ -1.6
VPS13B-208ENST00000521037 C3orf58Q8NDZ4 430 aa5.06□□□□□ -1.6
VPS13B-208ENST00000521037 GRIN3AQ8TCU5 1115 aa5.06□□□□□ -1.6
VPS13B-208ENST00000521037 RAET1EQ8TD07 263 aa5.06□□□□□ -1.6
VPS13B-208ENST00000521037 ALKBH8Q96BT7 664 aaKnown RBP5.06□□□□□ -1.6
VPS13B-208ENST00000521037 NSUN3Q9H649 340 aaKnown RBP5.06□□□□□ -1.6
VPS13B-208ENST00000521037 C11orf49Q9H6J7 331 aa5.06□□□□□ -1.6
VPS13B-208ENST00000521037 ALG13Q9NP73 1137 aaKnown RBP5.06□□□□□ -1.6
VPS13B-208ENST00000521037 BIN2Q9UBW5 565 aaPredicted RBP5.06□□□□□ -1.6
VPS13B-208ENST00000521037 GJD2Q9UKL4 321 aa5.06□□□□□ -1.6
VPS13B-208ENST00000521037 PPP2R3BQ9Y5P8 575 aa5.06□□□□□ -1.6
VPS13B-208ENST00000521037 ECM29Q5VYK3 1845 aa5.06□□□□□ -1.6
VPS13B-208ENST00000521037 FRYLO94915 3013 aa5.06□□□□□ -1.6
VPS13B-208ENST00000521037 ARAP2Q8WZ64 1704 aa5.06□□□□□ -1.6
VPS13B-208ENST00000521037 MED23Q9ULK4 1368 aa5.05□□□□□ -1.6
VPS13B-208ENST00000521037 CLRN2A0PK11 232 aa5.05□□□□□ -1.6
VPS13B-208ENST00000521037 ETV2O00321 342 aaPredicted RBP5.05□□□□□ -1.6
VPS13B-208ENST00000521037 NDUFB5O43674 189 aa5.05□□□□□ -1.6
VPS13B-208ENST00000521037 GLDCP23378 1020 aa5.05□□□□□ -1.6
VPS13B-208ENST00000521037 UBXN2AP68543 259 aa5.05□□□□□ -1.6
VPS13B-208ENST00000521037 HNRNPUQ00839 825 aaKnown RBP eCLIP5.05□□□□□ -1.6
VPS13B-208ENST00000521037 RASIP1Q5U651 963 aa5.05□□□□□ -1.6
VPS13B-208ENST00000521037 ATG14Q6ZNE5 492 aa5.05□□□□□ -1.6
VPS13B-208ENST00000521037 ANKRD23Q86SG2 305 aa5.05□□□□□ -1.6
VPS13B-208ENST00000521037 C12orf40Q86WS4 652 aa5.05□□□□□ -1.6
VPS13B-208ENST00000521037 KIAA0825Q8IV33 1275 aa5.05□□□□□ -1.6
VPS13B-208ENST00000521037 SREK1Q8WXA9 508 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms