RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 MYL3P08590 195 aa20.64■□□□□ 0.89
VEGFA-222ENST00000520948 TXNP10599 105 aaKnown RBP20.64■□□□□ 0.89
VEGFA-222ENST00000520948 IGFBP4P22692 258 aa20.64■□□□□ 0.89
VEGFA-222ENST00000520948 RABGGTBP53611 331 aa20.64■□□□□ 0.89
VEGFA-222ENST00000520948 TTLL4Q14679 1199 aa20.64■□□□□ 0.89
VEGFA-222ENST00000520948 CCDC85BQ15834 202 aaPredicted RBP20.64■□□□□ 0.89
VEGFA-222ENST00000520948 KCNV1Q6PIU1 500 aa20.64■□□□□ 0.89
VEGFA-222ENST00000520948 PPP1R13LQ8WUF5 828 aa20.64■□□□□ 0.89
VEGFA-222ENST00000520948 GPRASP2Q96D09 838 aa20.64■□□□□ 0.89
VEGFA-222ENST00000520948 JADE2Q9NQC1 790 aa20.64■□□□□ 0.89
VEGFA-222ENST00000520948 TRMT13Q9NUP7 481 aaKnown RBP20.64■□□□□ 0.89
VEGFA-222ENST00000520948 IGLV3-22A0A075B6J6 115 aa20.63■□□□□ 0.89
VEGFA-222ENST00000520948 CYP2C9P11712 490 aa20.63■□□□□ 0.89
VEGFA-222ENST00000520948 SP2Q02086 613 aa20.63■□□□□ 0.89
VEGFA-222ENST00000520948 NONOQ15233 471 aaKnown RBP eCLIP20.63■□□□□ 0.893e-6■■■□□ 16.3
VEGFA-222ENST00000520948 LY6KQ17RY6 165 aa20.63■□□□□ 0.89
VEGFA-222ENST00000520948 CEP55Q53EZ4 464 aa20.63■□□□□ 0.89
VEGFA-222ENST00000520948 NIPA1Q7RTP0 329 aa20.63■□□□□ 0.89
VEGFA-222ENST00000520948 OR6J1Q8NGC5 347 aa20.63■□□□□ 0.89
VEGFA-222ENST00000520948 CYP2W1Q8TAV3 490 aa20.63■□□□□ 0.89
VEGFA-222ENST00000520948 SLC28A3Q9HAS3 691 aa20.63■□□□□ 0.89
VEGFA-222ENST00000520948 BRMS1Q9HCU9 246 aa20.63■□□□□ 0.89
VEGFA-222ENST00000520948 ZBBXA8MT70 800 aa20.62■□□□□ 0.89
VEGFA-222ENST00000520948 FAM86B1E9PN63 330 aa20.62■□□□□ 0.89
VEGFA-222ENST00000520948 FIBPO43427 364 aa20.62■□□□□ 0.89
VEGFA-222ENST00000520948 FAM86B2P0C5J1 330 aa20.62■□□□□ 0.89
VEGFA-222ENST00000520948 PURAQ00577 322 aaKnown RBP20.62■□□□□ 0.89
VEGFA-222ENST00000520948 GNPTABQ3T906 1256 aa20.62■□□□□ 0.89
VEGFA-222ENST00000520948 FAM47CQ5HY64 1035 aa20.62■□□□□ 0.89
VEGFA-222ENST00000520948 LARP1BQ659C4 914 aaKnown RBP20.62■□□□□ 0.89
VEGFA-222ENST00000520948 NLRX1Q86UT6 975 aa20.62■□□□□ 0.89
VEGFA-222ENST00000520948 COPS5Q92905 334 aa20.62■□□□□ 0.89
VEGFA-222ENST00000520948 VWCEQ96DN2 955 aa20.62■□□□□ 0.89
VEGFA-222ENST00000520948 SEZ6LQ9BYH1 1024 aa20.62■□□□□ 0.89
VEGFA-222ENST00000520948 FOXP1Q9H334 677 aaPredicted RBP20.62■□□□□ 0.89
VEGFA-222ENST00000520948 POLR3EQ9NVU0 708 aa20.62■□□□□ 0.89
VEGFA-222ENST00000520948 MRVI1Q9Y6F6 885 aa20.62■□□□□ 0.89
VEGFA-222ENST00000520948 SLC4A7Q9Y6M7 1214 aa20.62■□□□□ 0.89
VEGFA-222ENST00000520948 CHD9Q3L8U1 2897 aa20.62■□□□□ 0.89
VEGFA-222ENST00000520948 CYP3A7-CYP3A51PA0A087WV96 503 aa20.61■□□□□ 0.89
VEGFA-222ENST00000520948 CCDC194A0A1B0GVG4 234 aa20.61■□□□□ 0.89
VEGFA-222ENST00000520948 FAM205CA6NFA0 338 aa20.61■□□□□ 0.89
VEGFA-222ENST00000520948 MYOGP15173 224 aa20.61■□□□□ 0.89
VEGFA-222ENST00000520948 CYP3A7P24462 503 aa20.61■□□□□ 0.89
VEGFA-222ENST00000520948 U2AF2P26368 475 aaKnown RBP eCLIP20.61■□□□□ 0.892e-48■□□□□ 11.2
VEGFA-222ENST00000520948 CPT1AP50416 773 aa20.61■□□□□ 0.89
VEGFA-222ENST00000520948 SAFBQ15424 915 aaKnown RBP eCLIP20.61■□□□□ 0.89
VEGFA-222ENST00000520948 INF2Q27J81 1249 aa20.61■□□□□ 0.89
VEGFA-222ENST00000520948 PIK3AP1Q6ZUJ8 805 aa20.61■□□□□ 0.89
VEGFA-222ENST00000520948 MBOAT7Q96N66 472 aa20.61■□□□□ 0.89
VEGFA-222ENST00000520948 SENP7Q9BQF6 1050 aa20.61■□□□□ 0.89
VEGFA-222ENST00000520948 SCN10AQ9Y5Y9 1956 aa20.6■□□□□ 0.89
VEGFA-222ENST00000520948 KIF28PB7ZC32 967 aa20.6■□□□□ 0.89
VEGFA-222ENST00000520948 ATP9AO75110 1047 aa20.6■□□□□ 0.89
VEGFA-222ENST00000520948 ARP10275 920 aa20.6■□□□□ 0.89
VEGFA-222ENST00000520948 ARHGAP1Q07960 439 aa20.6■□□□□ 0.89
VEGFA-222ENST00000520948 MOXD1Q6UVY6 613 aa20.6■□□□□ 0.89
VEGFA-222ENST00000520948 DEFB128Q7Z7B8 93 aa20.6■□□□□ 0.89
VEGFA-222ENST00000520948 RPUSD2Q8IZ73 545 aaKnown RBP20.6■□□□□ 0.89
VEGFA-222ENST00000520948 EMID1Q96A84 441 aaPredicted RBP20.6■□□□□ 0.89
VEGFA-222ENST00000520948 LENG9Q96B70 501 aa20.6■□□□□ 0.89
VEGFA-222ENST00000520948 CDHR1Q96JP9 859 aa20.6■□□□□ 0.89
VEGFA-222ENST00000520948 MTG1Q9BT17 334 aaPredicted RBP20.6■□□□□ 0.89
VEGFA-222ENST00000520948 BCAS3Q9H6U6 928 aa20.6■□□□□ 0.89
VEGFA-222ENST00000520948 KCNH7Q9NS40 1196 aa20.6■□□□□ 0.89
VEGFA-222ENST00000520948 FOXD4L1Q9NU39 408 aa20.6■□□□□ 0.89
VEGFA-222ENST00000520948 THEGQ9P2T0 379 aa20.6■□□□□ 0.89
VEGFA-222ENST00000520948 TANC1Q9C0D5 1861 aa20.6■□□□□ 0.89
VEGFA-222ENST00000520948 GH1P01241 217 aa20.59■□□□□ 0.89
VEGFA-222ENST00000520948 UBA1P22314 1058 aaKnown RBP20.59■□□□□ 0.89
VEGFA-222ENST00000520948 ZNF76P36508 570 aa20.59■□□□□ 0.89
VEGFA-222ENST00000520948 MTMR1Q13613 665 aa20.59■□□□□ 0.89
VEGFA-222ENST00000520948 CELF3Q5SZQ8 465 aaKnown RBP20.59■□□□□ 0.89
VEGFA-222ENST00000520948 MYSM1Q5VVJ2 828 aa20.59■□□□□ 0.89
VEGFA-222ENST00000520948 PPP2R2DQ66LE6 453 aa20.59■□□□□ 0.89
VEGFA-222ENST00000520948 SUPT20HL2P0C7V6 817 aa20.58■□□□□ 0.89
VEGFA-222ENST00000520948 KCNA2P16389 499 aa20.58■□□□□ 0.89
VEGFA-222ENST00000520948 CHMP4BP1P59074 171 aa20.58■□□□□ 0.89
VEGFA-222ENST00000520948 NBPF20Q3BBV1 942 aa20.58■□□□□ 0.89
VEGFA-222ENST00000520948 Q4G0T1 1027 aa20.58■□□□□ 0.89
VEGFA-222ENST00000520948 PPP4R3AQ6IN85 833 aa20.58■□□□□ 0.89
VEGFA-222ENST00000520948 NEK8Q86SG6 692 aa20.58■□□□□ 0.89
VEGFA-222ENST00000520948 PLA2G4DQ86XP0 818 aa20.58■□□□□ 0.89
VEGFA-222ENST00000520948 A6NJR5 290 aa20.57■□□□□ 0.88
VEGFA-222ENST00000520948 ATP2A2P16615 1042 aaKnown RBP20.57■□□□□ 0.88
VEGFA-222ENST00000520948 PDCP20941 246 aa20.57■□□□□ 0.88
VEGFA-222ENST00000520948 SYT1P21579 422 aa20.57■□□□□ 0.88
VEGFA-222ENST00000520948 LAMC2Q13753 1193 aa20.57■□□□□ 0.88
VEGFA-222ENST00000520948 NEDD9Q14511 834 aa20.57■□□□□ 0.88
VEGFA-222ENST00000520948 NOSTRINQ8IVI9 506 aa20.57■□□□□ 0.88
VEGFA-222ENST00000520948 DHX37Q8IY37 1157 aaKnown RBP20.57■□□□□ 0.88
VEGFA-222ENST00000520948 MICALL1Q8N3F8 863 aa20.57■□□□□ 0.88
VEGFA-222ENST00000520948 ATXN2LQ8WWM7 1075 aaKnown RBP20.57■□□□□ 0.88
VEGFA-222ENST00000520948 DOCK5Q9H7D0 1870 aa20.57■□□□□ 0.88
VEGFA-222ENST00000520948 AGO4Q9HCK5 861 aaKnown RBP20.57■□□□□ 0.88
VEGFA-222ENST00000520948 PCDHA11Q9Y5I1 949 aa20.57■□□□□ 0.88
VEGFA-222ENST00000520948 TNFRSF10AO00220 468 aa20.56■□□□□ 0.88
VEGFA-222ENST00000520948 DHX15O43143 795 aaKnown RBP20.56■□□□□ 0.88
VEGFA-222ENST00000520948 TDP2O95551 362 aa20.56■□□□□ 0.88
VEGFA-222ENST00000520948 GGPS1O95749 300 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms