RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 PITPNM1O00562 1244 aa18.47■□□□□ 0.55
TNPO1-212ENST00000520850 ZNF286BP0CG31 522 aa18.47■□□□□ 0.55
TNPO1-212ENST00000520850 ITGB8P26012 769 aa18.47■□□□□ 0.55
TNPO1-212ENST00000520850 RBL2Q08999 1139 aa18.47■□□□□ 0.55
TNPO1-212ENST00000520850 PRR16Q569H4 304 aa18.47■□□□□ 0.55
TNPO1-212ENST00000520850 ZNF746Q6NUN9 644 aaPredicted RBP18.47■□□□□ 0.55
TNPO1-212ENST00000520850 CHRDL2Q6WN34 429 aa18.47■□□□□ 0.55
TNPO1-212ENST00000520850 NEK8Q86SG6 692 aa18.47■□□□□ 0.55
TNPO1-212ENST00000520850 SMAP1Q8IYB5 467 aaPredicted RBP18.47■□□□□ 0.55
TNPO1-212ENST00000520850 SLC5A5Q92911 643 aa18.47■□□□□ 0.55
TNPO1-212ENST00000520850 ERAP1Q9NZ08 941 aa18.47■□□□□ 0.55
TNPO1-212ENST00000520850 HDAC6Q9UBN7 1215 aa18.47■□□□□ 0.55
TNPO1-212ENST00000520850 TBX3O15119 743 aa18.46■□□□□ 0.55
TNPO1-212ENST00000520850 CD2BP2O95400 341 aaKnown RBP18.46■□□□□ 0.55
TNPO1-212ENST00000520850 GNAT1P11488 350 aa18.46■□□□□ 0.55
TNPO1-212ENST00000520850 ACTR2P61160 394 aa18.46■□□□□ 0.55
TNPO1-212ENST00000520850 KRT76Q01546 638 aa18.46■□□□□ 0.55
TNPO1-212ENST00000520850 SAFBQ15424 915 aaKnown RBP eCLIP18.46■□□□□ 0.55
TNPO1-212ENST00000520850 PTGISQ16647 500 aa18.46■□□□□ 0.55
TNPO1-212ENST00000520850 FAM47CQ5HY64 1035 aa18.46■□□□□ 0.55
TNPO1-212ENST00000520850 ABHD15Q6UXT9 468 aa18.46■□□□□ 0.55
TNPO1-212ENST00000520850 FAM184AQ8NB25 1140 aa18.46■□□□□ 0.55
TNPO1-212ENST00000520850 CAGE1Q8TC20 777 aa18.46■□□□□ 0.55
TNPO1-212ENST00000520850 OXER1Q8TDS5 423 aa18.46■□□□□ 0.55
TNPO1-212ENST00000520850 AFAP1L1Q8TED9 768 aa18.46■□□□□ 0.55
TNPO1-212ENST00000520850 BADQ92934 168 aa18.46■□□□□ 0.55
TNPO1-212ENST00000520850 C8orf76Q96K31 380 aa18.46■□□□□ 0.55
TNPO1-212ENST00000520850 NOC4LQ9BVI4 516 aaKnown RBP18.46■□□□□ 0.55
TNPO1-212ENST00000520850 FOXP1Q9H334 677 aaPredicted RBP18.46■□□□□ 0.55
TNPO1-212ENST00000520850 TRMT13Q9NUP7 481 aaKnown RBP18.46■□□□□ 0.55
TNPO1-212ENST00000520850 LTBP2Q14767 1821 aa18.46■□□□□ 0.55
TNPO1-212ENST00000520850 NRCAMQ92823 1304 aa18.46■□□□□ 0.55
TNPO1-212ENST00000520850 BTBD18B2RXH4 712 aa18.45■□□□□ 0.54
TNPO1-212ENST00000520850 MSH4O15457 936 aa18.45■□□□□ 0.54
TNPO1-212ENST00000520850 SORBS3O60504 671 aa18.45■□□□□ 0.54
TNPO1-212ENST00000520850 MDM2Q00987 491 aaPredicted RBP18.45■□□□□ 0.54
TNPO1-212ENST00000520850 BFSP2Q13515 415 aa18.45■□□□□ 0.54
TNPO1-212ENST00000520850 INF2Q27J81 1249 aa18.45■□□□□ 0.54
TNPO1-212ENST00000520850 GDF6Q6KF10 455 aaPredicted RBP18.45■□□□□ 0.54
TNPO1-212ENST00000520850 DIS3L2Q8IYB7 885 aaKnown RBP18.45■□□□□ 0.54
TNPO1-212ENST00000520850 TMEM199Q8N511 208 aa18.45■□□□□ 0.54
TNPO1-212ENST00000520850 FAM20AQ96MK3 541 aa18.45■□□□□ 0.54
TNPO1-212ENST00000520850 CTAGE1Q96RT6 745 aa18.45■□□□□ 0.54
TNPO1-212ENST00000520850 HIPK3Q9H422 1215 aa18.45■□□□□ 0.54
TNPO1-212ENST00000520850 DOCK5Q9H7D0 1870 aa18.45■□□□□ 0.54
TNPO1-212ENST00000520850 RANBP2P49792 3224 aaKnown RBP18.44■□□□□ 0.54
TNPO1-212ENST00000520850 PSMD10O75832 226 aa18.44■□□□□ 0.54
TNPO1-212ENST00000520850 PARNO95453 639 aaKnown RBP18.44■□□□□ 0.54
TNPO1-212ENST00000520850 CCNE2O96020 404 aa18.44■□□□□ 0.54
TNPO1-212ENST00000520850 ADAM17P78536 824 aa18.44■□□□□ 0.54
TNPO1-212ENST00000520850 NR5A1Q13285 461 aa18.44■□□□□ 0.54
TNPO1-212ENST00000520850 PTK7Q13308 1070 aa18.44■□□□□ 0.54
TNPO1-212ENST00000520850 B3GNT9Q6UX72 402 aa18.44■□□□□ 0.54
TNPO1-212ENST00000520850 PIK3AP1Q6ZUJ8 805 aa18.44■□□□□ 0.54
TNPO1-212ENST00000520850 CCDC155Q8N6L0 562 aa18.44■□□□□ 0.54
TNPO1-212ENST00000520850 RDM1Q8NG50 284 aa18.44■□□□□ 0.54
TNPO1-212ENST00000520850 PCYT2Q99447 389 aa18.44■□□□□ 0.54
TNPO1-212ENST00000520850 UBE2OQ9C0C9 1292 aaKnown RBP18.44■□□□□ 0.54
TNPO1-212ENST00000520850 RNPEPQ9H4A4 650 aa18.44■□□□□ 0.54
TNPO1-212ENST00000520850 AZI2Q9H6S1 392 aa18.44■□□□□ 0.54
TNPO1-212ENST00000520850 PKD2L1Q9P0L9 805 aa18.44■□□□□ 0.54
TNPO1-212ENST00000520850 TELO2Q9Y4R8 837 aa18.44■□□□□ 0.54
TNPO1-212ENST00000520850 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.44■□□□□ 0.54
TNPO1-212ENST00000520850 PCDHA10Q9Y5I2 948 aa18.44■□□□□ 0.54
TNPO1-212ENST00000520850 C17orf102A2RUQ5 167 aa18.43■□□□□ 0.54
TNPO1-212ENST00000520850 SMIM10L2AP0DMW4 78 aa18.43■□□□□ 0.54
TNPO1-212ENST00000520850 SMIM10L2BP0DMW5 78 aa18.43■□□□□ 0.54
TNPO1-212ENST00000520850 SFNP31947 248 aa18.43■□□□□ 0.54
TNPO1-212ENST00000520850 RFC2P35250 354 aa18.43■□□□□ 0.54
TNPO1-212ENST00000520850 STAT5BP51692 787 aa18.43■□□□□ 0.54
TNPO1-212ENST00000520850 FPGSQ05932 587 aa18.43■□□□□ 0.54
TNPO1-212ENST00000520850 PPIGQ13427 754 aaKnown RBP eCLIP18.43■□□□□ 0.541e-7■□□□□ 9.4
TNPO1-212ENST00000520850 CUL4AQ13619 759 aa18.43■□□□□ 0.54
TNPO1-212ENST00000520850 HABP4Q5JVS0 413 aaKnown RBP18.43■□□□□ 0.54
TNPO1-212ENST00000520850 UTP14CQ5TAP6 766 aaKnown RBP18.43■□□□□ 0.54
TNPO1-212ENST00000520850 MIS18BP1Q6P0N0 1132 aa18.43■□□□□ 0.54
TNPO1-212ENST00000520850 TDHQ8IZJ6 230 aa18.43■□□□□ 0.54
TNPO1-212ENST00000520850 ETNPPLQ8TBG4 499 aa18.43■□□□□ 0.54
TNPO1-212ENST00000520850 GLG1Q92896 1179 aa18.43■□□□□ 0.54
TNPO1-212ENST00000520850 KCNMB3Q9NPA1 279 aa18.43■□□□□ 0.54
TNPO1-212ENST00000520850 DDX25Q9UHL0 483 aaKnown RBP18.43■□□□□ 0.54
TNPO1-212ENST00000520850 TCEAL9Q9UHQ7 104 aa18.43■□□□□ 0.54
TNPO1-212ENST00000520850 MAFBQ9Y5Q3 323 aaPredicted RBP18.43■□□□□ 0.54
TNPO1-212ENST00000520850 RRN3P2A6NIE6 340 aa18.42■□□□□ 0.54
TNPO1-212ENST00000520850 DTNBO60941 627 aa18.42■□□□□ 0.54
TNPO1-212ENST00000520850 CAND2O75155 1236 aa18.42■□□□□ 0.54
TNPO1-212ENST00000520850 TDP2O95551 362 aa18.42■□□□□ 0.54
TNPO1-212ENST00000520850 RPLP2P05387 115 aaKnown RBP18.42■□□□□ 0.54
TNPO1-212ENST00000520850 SP4Q02446 784 aa18.42■□□□□ 0.54
TNPO1-212ENST00000520850 ORC2Q13416 577 aaPredicted RBP18.42■□□□□ 0.54
TNPO1-212ENST00000520850 LETM2Q2VYF4 491 aa18.42■□□□□ 0.54
TNPO1-212ENST00000520850 EARS2Q5JPH6 523 aaKnown RBP18.42■□□□□ 0.54
TNPO1-212ENST00000520850 FAM160B1Q5W0V3 765 aa18.42■□□□□ 0.54
TNPO1-212ENST00000520850 RPAINQ86UA6 219 aa18.42■□□□□ 0.54
TNPO1-212ENST00000520850 SERINC5Q86VE9 423 aa18.42■□□□□ 0.54
TNPO1-212ENST00000520850 RPUSD2Q8IZ73 545 aaKnown RBP18.42■□□□□ 0.54
TNPO1-212ENST00000520850 NOD1Q9Y239 953 aa18.42■□□□□ 0.54
TNPO1-212ENST00000520850 WDR64B1ANS9 1081 aa18.41■□□□□ 0.54
TNPO1-212ENST00000520850 GAS7O60861 476 aa18.41■□□□□ 0.54
TNPO1-212ENST00000520850 PSAPP07602 524 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms