RNA–Protein interactions for RNA: ENST00000520846.1

MSR1-211, Transcript of macrophage scavenger receptor 1, human

TSL 4

Gene MSR1, Length 373 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSR1-211	ENST00000520846	KCNC1	P48547	511 aa		7.3	□□□□□ -1.24
MSR1-211	ENST00000520846	JAM2	P57087	298 aa		7.3	□□□□□ -1.24
MSR1-211	ENST00000520846	FNDC3B	Q53EP0	1204 aa	Known RBP	7.3	□□□□□ -1.24
MSR1-211	ENST00000520846	TMC5	Q6UXY8	1006 aa		7.3	□□□□□ -1.24
MSR1-211	ENST00000520846	TTLL10	Q6ZVT0	673 aa		7.3	□□□□□ -1.24
MSR1-211	ENST00000520846	PTRH1	Q86Y79	214 aa	Known RBP	7.3	□□□□□ -1.24
MSR1-211	ENST00000520846	SYT8	Q8NBV8	401 aa		7.3	□□□□□ -1.24
MSR1-211	ENST00000520846	CLIC6	Q96NY7	704 aa		7.3	□□□□□ -1.24
MSR1-211	ENST00000520846	SPATA25	Q9BR10	227 aa		7.3	□□□□□ -1.24
MSR1-211	ENST00000520846	RBPJL	Q9UBG7	517 aa		7.3	□□□□□ -1.24
MSR1-211	ENST00000520846	WASF3	Q9UPY6	502 aa		7.3	□□□□□ -1.24
MSR1-211	ENST00000520846	COQ6	Q9Y2Z9	468 aa		7.3	□□□□□ -1.24
MSR1-211	ENST00000520846	ESYT3	A0FGR9	886 aa		7.29	□□□□□ -1.24
MSR1-211	ENST00000520846	ZNF561-AS1	K7EIQ3	104 aa		7.29	□□□□□ -1.24
MSR1-211	ENST00000520846	MAN2B1	O00754	1011 aa		7.29	□□□□□ -1.24
MSR1-211	ENST00000520846	PPP1R12A	O14974	1030 aa	Predicted RBP	7.29	□□□□□ -1.24
MSR1-211	ENST00000520846	LACTB	P83111	547 aa	Predicted RBP	7.29	□□□□□ -1.24
MSR1-211	ENST00000520846	FIGN	Q5HY92	759 aa		7.29	□□□□□ -1.24
MSR1-211	ENST00000520846	BTBD8	Q5XKL5	378 aa		7.29	□□□□□ -1.24
MSR1-211	ENST00000520846	VASN	Q6EMK4	673 aa		7.29	□□□□□ -1.24
MSR1-211	ENST00000520846	FEZF2	Q8TBJ5	459 aa		7.29	□□□□□ -1.24
MSR1-211	ENST00000520846	CLUHP3	Q96NS8	147 aa		7.29	□□□□□ -1.24
MSR1-211	ENST00000520846	CELF4	Q9BZC1	486 aa	Known RBP	7.29	□□□□□ -1.24
MSR1-211	ENST00000520846	ACOT7	O00154	380 aa		7.28	□□□□□ -1.24
MSR1-211	ENST00000520846	ASMTL	O95671	621 aa		7.28	□□□□□ -1.24
MSR1-211	ENST00000520846	PTPN1	P18031	435 aa	Known RBP	7.28	□□□□□ -1.24
MSR1-211	ENST00000520846	PRR31	Q5SQ13	230 aa		7.28	□□□□□ -1.24
MSR1-211	ENST00000520846	PROSER1	Q86XN7	944 aa		7.28	□□□□□ -1.24
MSR1-211	ENST00000520846	SYNPO	Q8N3V7	929 aa		7.28	□□□□□ -1.24
MSR1-211	ENST00000520846	CISD2	Q8N5K1	135 aa	Known RBP	7.28	□□□□□ -1.24
MSR1-211	ENST00000520846	ZSWIM3	Q96MP5	696 aa		7.28	□□□□□ -1.24
MSR1-211	ENST00000520846	XYLT2	Q9H1B5	865 aa		7.28	□□□□□ -1.24
MSR1-211	ENST00000520846	SMURF1	Q9HCE7	757 aa		7.28	□□□□□ -1.24
MSR1-211	ENST00000520846	ATP23	Q9Y6H3	246 aa		7.28	□□□□□ -1.24
MSR1-211	ENST00000520846	FAM90A27P	A6NNH2	459 aa		7.27	□□□□□ -1.25
MSR1-211	ENST00000520846	CYP7B1	O75881	506 aa		7.27	□□□□□ -1.25
MSR1-211	ENST00000520846	NPTXR	O95502	500 aa		7.27	□□□□□ -1.25
MSR1-211	ENST00000520846	KCNA6	P17658	529 aa		7.27	□□□□□ -1.25
MSR1-211	ENST00000520846	GJA4	P35212	333 aa		7.27	□□□□□ -1.25
MSR1-211	ENST00000520846	CD276	Q5ZPR3	534 aa		7.27	□□□□□ -1.25
MSR1-211	ENST00000520846	ABHD17C	Q6PCB6	329 aa		7.27	□□□□□ -1.25
MSR1-211	ENST00000520846	HOMER1	Q86YM7	354 aa		7.27	□□□□□ -1.25
MSR1-211	ENST00000520846	IGSF22	Q8N9C0	903 aa		7.27	□□□□□ -1.25
MSR1-211	ENST00000520846	WRNIP1	Q96S55	665 aa		7.27	□□□□□ -1.25
MSR1-211	ENST00000520846	RIC8B	Q9NVN3	520 aa		7.27	□□□□□ -1.25
MSR1-211	ENST00000520846	RAPGEFL1	Q9UHV5	662 aa		7.27	□□□□□ -1.25
MSR1-211	ENST00000520846	OTOL1	A6NHN0	477 aa	Predicted RBP	7.26	□□□□□ -1.25
MSR1-211	ENST00000520846		B4E1Z4	1266 aa		7.26	□□□□□ -1.25
MSR1-211	ENST00000520846	DDX3X	O00571	662 aa	Known RBP eCLIP	7.26	□□□□□ -1.25
MSR1-211	ENST00000520846	KCNK3	O14649	394 aa		7.26	□□□□□ -1.25
MSR1-211	ENST00000520846	ENO2	P09104	434 aa	Predicted RBP	7.26	□□□□□ -1.25
MSR1-211	ENST00000520846	HOXA5	P20719	270 aa		7.26	□□□□□ -1.25
MSR1-211	ENST00000520846	RTP5	Q14D33	572 aa		7.26	□□□□□ -1.25
MSR1-211	ENST00000520846	PRAMEF18	Q5VWM3	479 aa		7.26	□□□□□ -1.25
MSR1-211	ENST00000520846	HHIPL2	Q6UWX4	724 aa		7.26	□□□□□ -1.25
MSR1-211	ENST00000520846	OVCH1	Q7RTY7	1134 aa		7.26	□□□□□ -1.25
MSR1-211	ENST00000520846	ZNF761	Q86XN6	746 aa	Predicted RBP	7.26	□□□□□ -1.25
MSR1-211	ENST00000520846	ZDHHC14	Q8IZN3	488 aa		7.26	□□□□□ -1.25
MSR1-211	ENST00000520846	DTX3	Q8N9I9	347 aa		7.26	□□□□□ -1.25
MSR1-211	ENST00000520846	ADAMTS17	Q8TE56	1095 aa		7.26	□□□□□ -1.25
MSR1-211	ENST00000520846	DLL4	Q9NR61	685 aa		7.26	□□□□□ -1.25
MSR1-211	ENST00000520846	CROT	Q9UKG9	612 aa		7.26	□□□□□ -1.25
MSR1-211	ENST00000520846	MRPL42	Q9Y6G3	142 aa	Known RBP	7.26	□□□□□ -1.25
MSR1-211	ENST00000520846	CLASP2	O75122	1294 aa	Known RBP	7.25	□□□□□ -1.25
MSR1-211	ENST00000520846	RFPL3	O75679	317 aa		7.25	□□□□□ -1.25
MSR1-211	ENST00000520846	IL13	P35225	146 aa		7.25	□□□□□ -1.25
MSR1-211	ENST00000520846	IGFALS	P35858	605 aa		7.25	□□□□□ -1.25
MSR1-211	ENST00000520846	GJA9	P57773	515 aa		7.25	□□□□□ -1.25
MSR1-211	ENST00000520846	PFKP	Q01813	784 aa		7.25	□□□□□ -1.25
MSR1-211	ENST00000520846	DBP	Q10586	325 aa	Predicted RBP	7.25	□□□□□ -1.25
MSR1-211	ENST00000520846	TCEA2	Q15560	299 aa		7.25	□□□□□ -1.25
MSR1-211	ENST00000520846	TMEM177	Q53S58	311 aa		7.25	□□□□□ -1.25
MSR1-211	ENST00000520846	NT5DC1	Q5TFE4	455 aa		7.25	□□□□□ -1.25
MSR1-211	ENST00000520846	APPBP2	Q92624	585 aa		7.25	□□□□□ -1.25
MSR1-211	ENST00000520846	FANCL	Q9NW38	375 aa		7.25	□□□□□ -1.25
MSR1-211	ENST00000520846	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	7.24	□□□□□ -1.25
MSR1-211	ENST00000520846	ZNF839	A8K0R7	811 aa		7.24	□□□□□ -1.25
MSR1-211	ENST00000520846	OPA1	O60313	960 aa		7.24	□□□□□ -1.25
MSR1-211	ENST00000520846	NOBOX	O60393	691 aa		7.24	□□□□□ -1.25
MSR1-211	ENST00000520846	DNAJC8	O75937	253 aa	Predicted RBP	7.24	□□□□□ -1.25
MSR1-211	ENST00000520846	ASL	P04424	464 aa		7.24	□□□□□ -1.25
MSR1-211	ENST00000520846	ZNF28	P17035	718 aa		7.24	□□□□□ -1.25
MSR1-211	ENST00000520846	MLLT6	P55198	1093 aa	Predicted RBP	7.24	□□□□□ -1.25
MSR1-211	ENST00000520846	PABPC4	Q13310	644 aa	Known RBP eCLIP	7.24	□□□□□ -1.25
MSR1-211	ENST00000520846	SKIDA1	Q1XH10	827 aa		7.24	□□□□□ -1.25
MSR1-211	ENST00000520846	FAM26F	Q5R3K3	315 aa		7.24	□□□□□ -1.25
MSR1-211	ENST00000520846	MCTP2	Q6DN12	878 aa		7.24	□□□□□ -1.25
MSR1-211	ENST00000520846	ZCCHC8	Q6NZY4	707 aa	Known RBP	7.24	□□□□□ -1.25
MSR1-211	ENST00000520846	C16orf86	Q6ZW13	317 aa		7.24	□□□□□ -1.25
MSR1-211	ENST00000520846	DDX53	Q86TM3	631 aa	Known RBP	7.24	□□□□□ -1.25
MSR1-211	ENST00000520846	NOP9	Q86U38	636 aa	Known RBP	7.24	□□□□□ -1.25
MSR1-211	ENST00000520846	JAZF1	Q86VZ6	243 aa		7.24	□□□□□ -1.25
MSR1-211	ENST00000520846	L2HGDH	Q9H9P8	463 aa		7.24	□□□□□ -1.25
MSR1-211	ENST00000520846	USP40	Q9NVE5	1235 aa		7.24	□□□□□ -1.25
MSR1-211	ENST00000520846	TNPO3	Q9Y5L0	923 aa	Known RBP	7.24	□□□□□ -1.25
MSR1-211	ENST00000520846	RGL3	Q3MIN7	710 aa		7.23	□□□□□ -1.25
MSR1-211	ENST00000520846	PHF19	Q5T6S3	580 aa		7.23	□□□□□ -1.25
MSR1-211	ENST00000520846	FRMD5	Q7Z6J6	570 aa		7.23	□□□□□ -1.25
MSR1-211	ENST00000520846	C2orf69	Q8N8R5	385 aa		7.23	□□□□□ -1.25
MSR1-211	ENST00000520846	IGDCC4	Q8TDY8	1250 aa		7.23	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms