RNA–Protein interactions for RNA: ENST00000519835.5

CPEB4-207, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-207ENST00000519835 CCDC65Q8IXS2 484 aa13.14□□□□□ -0.31
CPEB4-207ENST00000519835 DNAJC19Q96DA6 116 aa13.14□□□□□ -0.31
CPEB4-207ENST00000519835 MYCBPQ99417 103 aaPredicted RBP13.14□□□□□ -0.31
CPEB4-207ENST00000519835 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.14□□□□□ -0.31
CPEB4-207ENST00000519835 PANK4Q9NVE7 773 aa13.14□□□□□ -0.31
CPEB4-207ENST00000519835 JAG2Q9Y219 1238 aa13.14□□□□□ -0.31
CPEB4-207ENST00000519835 STRCQ7RTU9 1775 aa13.14□□□□□ -0.31
CPEB4-207ENST00000519835 PLIN4Q96Q06 1357 aa13.13□□□□□ -0.31
CPEB4-207ENST00000519835 GCOM1H8Y6P7 765 aaPredicted RBP13.13□□□□□ -0.31
CPEB4-207ENST00000519835 MYZAPP0CAP1 466 aa13.13□□□□□ -0.31
CPEB4-207ENST00000519835 ANXA13P27216 316 aa13.13□□□□□ -0.31
CPEB4-207ENST00000519835 DNA2P51530 1060 aa13.13□□□□□ -0.31
CPEB4-207ENST00000519835 USP11P51784 963 aa13.13□□□□□ -0.31
CPEB4-207ENST00000519835 BIRC3Q13489 604 aa13.13□□□□□ -0.31
CPEB4-207ENST00000519835 MTMR3Q13615 1198 aa13.13□□□□□ -0.31
CPEB4-207ENST00000519835 ZC3H3Q8IXZ2 948 aaKnown RBP13.13□□□□□ -0.31
CPEB4-207ENST00000519835 ACTRT1Q8TDG2 376 aa13.13□□□□□ -0.31
CPEB4-207ENST00000519835 GANQ9H2C0 597 aa13.13□□□□□ -0.31
CPEB4-207ENST00000519835 THRAP3Q9Y2W1 955 aaKnown RBP13.13□□□□□ -0.31
CPEB4-207ENST00000519835 BZW2Q9Y6E2 419 aaKnown RBP13.13□□□□□ -0.31
CPEB4-207ENST00000519835 A0A087X0T9 212 aa13.13□□□□□ -0.31
CPEB4-207ENST00000519835 KIF4AO95239 1232 aa13.13□□□□□ -0.31
CPEB4-207ENST00000519835 FAM228BP0C875 321 aa13.13□□□□□ -0.31
CPEB4-207ENST00000519835 NOVP48745 357 aa13.13□□□□□ -0.31
CPEB4-207ENST00000519835 HLTFQ14527 1009 aaKnown RBP eCLIP13.13□□□□□ -0.31
CPEB4-207ENST00000519835 ASPRV1Q53RT3 343 aa13.13□□□□□ -0.31
CPEB4-207ENST00000519835 HYIQ5T013 277 aa13.13□□□□□ -0.31
CPEB4-207ENST00000519835 RUFY4Q6ZNE9 571 aa13.13□□□□□ -0.31
CPEB4-207ENST00000519835 KCNK18Q7Z418 384 aa13.13□□□□□ -0.31
CPEB4-207ENST00000519835 MAPKAPK5Q8IW41 473 aa13.13□□□□□ -0.31
CPEB4-207ENST00000519835 CCT8L2Q96SF2 557 aa13.13□□□□□ -0.31
CPEB4-207ENST00000519835 SAP30BPQ9UHR5 308 aaKnown RBP13.13□□□□□ -0.31
CPEB4-207ENST00000519835 CCDC188H7C350 402 aa13.12□□□□□ -0.31
CPEB4-207ENST00000519835 GCFC2P16383 781 aaKnown RBP13.12□□□□□ -0.31
CPEB4-207ENST00000519835 ERCC3P19447 782 aa13.12□□□□□ -0.31
CPEB4-207ENST00000519835 DDR1Q08345 913 aa13.12□□□□□ -0.31
CPEB4-207ENST00000519835 EDRF1Q3B7T1 1238 aa13.12□□□□□ -0.31
CPEB4-207ENST00000519835 TXNRD3Q86VQ6 643 aa13.12□□□□□ -0.31
CPEB4-207ENST00000519835 FAM133AQ8N9E0 248 aa13.12□□□□□ -0.31
CPEB4-207ENST00000519835 GLIS3Q8NEA6 775 aa13.12□□□□□ -0.31
CPEB4-207ENST00000519835 NAP1L4Q99733 375 aaKnown RBP13.12□□□□□ -0.31
CPEB4-207ENST00000519835 VCPKMTQ9H867 229 aa13.12□□□□□ -0.31
CPEB4-207ENST00000519835 VAT1LQ9HCJ6 419 aa13.12□□□□□ -0.31
CPEB4-207ENST00000519835 A1CFQ9NQ94 594 aaKnown RBP13.12□□□□□ -0.31
CPEB4-207ENST00000519835 PGRMC1O00264 195 aaKnown RBP13.11□□□□□ -0.31
CPEB4-207ENST00000519835 KCNK3O14649 394 aa13.11□□□□□ -0.31
CPEB4-207ENST00000519835 PLCG2P16885 1265 aa13.11□□□□□ -0.31
CPEB4-207ENST00000519835 ERVK-9P63128 1117 aa13.11□□□□□ -0.31
CPEB4-207ENST00000519835 DIXDC1Q155Q3 683 aa13.11□□□□□ -0.31
CPEB4-207ENST00000519835 TBC1D9BQ66K14 1250 aa13.11□□□□□ -0.31
CPEB4-207ENST00000519835 BICDL1Q6ZP65 573 aa13.11□□□□□ -0.31
CPEB4-207ENST00000519835 KLHL7Q8IXQ5 586 aa13.11□□□□□ -0.31
CPEB4-207ENST00000519835 SCFD2Q8WU76 684 aa13.11□□□□□ -0.31
CPEB4-207ENST00000519835 CEP95Q96GE4 821 aa13.11□□□□□ -0.31
CPEB4-207ENST00000519835 RTFDC1Q9BY42 306 aaPredicted RBP13.11□□□□□ -0.31
CPEB4-207ENST00000519835 ACTR5Q9H9F9 607 aaPredicted RBP13.11□□□□□ -0.31
CPEB4-207ENST00000519835 ADAMTS1Q9UHI8 967 aa13.11□□□□□ -0.31
CPEB4-207ENST00000519835 PACSIN2Q9UNF0 486 aaPredicted RBP13.11□□□□□ -0.31
CPEB4-207ENST00000519835 C10orf71Q711Q0 1435 aa13.11□□□□□ -0.31
CPEB4-207ENST00000519835 CNTNAP4Q9C0A0 1308 aa13.11□□□□□ -0.31
CPEB4-207ENST00000519835 BHMG1C9JSJ3 638 aaPredicted RBP13.11□□□□□ -0.31
CPEB4-207ENST00000519835 E7EVH7 732 aa13.11□□□□□ -0.31
CPEB4-207ENST00000519835 HSD17B3P37058 310 aa13.11□□□□□ -0.31
CPEB4-207ENST00000519835 HSPA2P54652 639 aa13.11□□□□□ -0.31
CPEB4-207ENST00000519835 HDLBPQ00341 1268 aaKnown RBP13.11□□□□□ -0.31
CPEB4-207ENST00000519835 AGBL2Q5U5Z8 902 aa13.11□□□□□ -0.31
CPEB4-207ENST00000519835 ARMC9Q7Z3E5 817 aa13.11□□□□□ -0.31
CPEB4-207ENST00000519835 NUDT12Q9BQG2 462 aa13.11□□□□□ -0.31
CPEB4-207ENST00000519835 PACSIN1Q9BY11 444 aa13.11□□□□□ -0.31
CPEB4-207ENST00000519835 LEMD3Q9Y2U8 911 aa13.11□□□□□ -0.31
CPEB4-207ENST00000519835 PDHBP11177 359 aa13.1□□□□□ -0.31
CPEB4-207ENST00000519835 ECHS1P30084 290 aa13.1□□□□□ -0.31
CPEB4-207ENST00000519835 CTNNA1P35221 906 aaKnown RBP13.1□□□□□ -0.31
CPEB4-207ENST00000519835 TNNI2P48788 182 aa13.1□□□□□ -0.31
CPEB4-207ENST00000519835 ACTN3Q08043 901 aaPredicted RBP13.1□□□□□ -0.31
CPEB4-207ENST00000519835 ZNF804AQ7Z570 1209 aa13.1□□□□□ -0.31
CPEB4-207ENST00000519835 NBPF5PQ86XG9 351 aaPredicted RBP13.1□□□□□ -0.31
CPEB4-207ENST00000519835 SLITRK6Q9H5Y7 841 aa13.1□□□□□ -0.31
CPEB4-207ENST00000519835 DDX25Q9UHL0 483 aaKnown RBP13.1□□□□□ -0.31
CPEB4-207ENST00000519835 GOLGA6L7A0A1B0GV03 622 aa13.1□□□□□ -0.31
CPEB4-207ENST00000519835 USP17L5A8MUK1 530 aa13.1□□□□□ -0.31
CPEB4-207ENST00000519835 CETN3O15182 167 aa13.1□□□□□ -0.31
CPEB4-207ENST00000519835 ZPR1O75312 459 aa13.1□□□□□ -0.31
CPEB4-207ENST00000519835 BTDP43251 543 aa13.1□□□□□ -0.31
CPEB4-207ENST00000519835 ARID5AQ03989 594 aa13.1□□□□□ -0.31
CPEB4-207ENST00000519835 RNF187Q5TA31 235 aaPredicted RBP13.1□□□□□ -0.31
CPEB4-207ENST00000519835 TEX11Q8IYF3 940 aa13.1□□□□□ -0.31
CPEB4-207ENST00000519835 CYFIP2Q96F07 1278 aa13.1□□□□□ -0.31
CPEB4-207ENST00000519835 SPAG5Q96R06 1193 aa13.1□□□□□ -0.31
CPEB4-207ENST00000519835 SETDB2Q96T68 719 aa13.1□□□□□ -0.31
CPEB4-207ENST00000519835 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.1□□□□□ -0.31
CPEB4-207ENST00000519835 TACO1Q9BSH4 297 aaKnown RBP13.1□□□□□ -0.31
CPEB4-207ENST00000519835 KCTD10Q9H3F6 313 aa13.1□□□□□ -0.31
CPEB4-207ENST00000519835 NOC2LQ9Y3T9 749 aaKnown RBP13.1□□□□□ -0.31
CPEB4-207ENST00000519835 PCDHA2Q9Y5H9 948 aa13.1□□□□□ -0.31
CPEB4-207ENST00000519835 SPATA31A1Q5TZJ5 1347 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 PITPNM2Q9BZ72 1349 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 H0YGN5 161 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 MYO1FO00160 1098 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 EDIL3O43854 480 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms