RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 F5H423 210 aaPredicted RBP8.56□□□□□ -1.04
CLK4-202ENST00000519132 CBX4O00257 560 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 MAN1A2O60476 641 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 MTHFSP49914 203 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 GBX1Q14549 363 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 SART3Q15020 963 aaKnown RBP8.56□□□□□ -1.04
CLK4-202ENST00000519132 BRINP3Q76B58 766 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 MTDHQ86UE4 582 aaKnown RBP8.56□□□□□ -1.04
CLK4-202ENST00000519132 CCDC103Q8IW40 242 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 IL22RA1Q8N6P7 574 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 GP6Q9HCN6 339 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 LDHCP07864 332 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 SCP2P22307 547 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 GALNT11Q8NCW6 608 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 CFAP53Q96M91 514 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 ZHX3Q9H4I2 956 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 RAI14Q9P0K7 980 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 SPDYE3A6NKU9 549 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 HTR3AP46098 478 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 MTA1Q13330 715 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 ACAP2Q15057 778 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 TOMM20Q15388 145 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 ZBTB37Q5TC79 503 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 KRT28Q7Z3Y7 464 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 AMOTL1Q8IY63 956 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 FAM156AQ8NDB6 213 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 POLKQ9UBT6 870 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 CDC23Q9UJX2 597 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 ANKRD6Q9Y2G4 727 aa8.56□□□□□ -1.04
CLK4-202ENST00000519132 TNS3Q68CZ2 1445 aa8.55□□□□□ -1.04
CLK4-202ENST00000519132 DHX16O60231 1041 aaKnown RBP8.55□□□□□ -1.04
CLK4-202ENST00000519132 SSR1P43307 286 aaKnown RBP8.55□□□□□ -1.04
CLK4-202ENST00000519132 PDCD1Q15116 288 aa8.55□□□□□ -1.04
CLK4-202ENST00000519132 DDB1Q16531 1140 aa8.55□□□□□ -1.04
CLK4-202ENST00000519132 CCDC174Q6PII3 467 aa8.55□□□□□ -1.04
CLK4-202ENST00000519132 ANKRD23Q86SG2 305 aa8.55□□□□□ -1.04
CLK4-202ENST00000519132 CPXCR1Q8N123 301 aa8.55□□□□□ -1.04
CLK4-202ENST00000519132 RGPD1P0DJD0 1748 aa8.55□□□□□ -1.04
CLK4-202ENST00000519132 NOP56O00567 594 aaKnown RBP8.55□□□□□ -1.04
CLK4-202ENST00000519132 ZEB2O60315 1214 aa8.55□□□□□ -1.04
CLK4-202ENST00000519132 LRRN2O75325 713 aa8.55□□□□□ -1.04
CLK4-202ENST00000519132 OSMP13725 252 aa8.55□□□□□ -1.04
CLK4-202ENST00000519132 IFIT1BQ5T764 474 aaKnown RBP8.55□□□□□ -1.04
CLK4-202ENST00000519132 SLC35G2Q8TBE7 412 aa8.55□□□□□ -1.04
CLK4-202ENST00000519132 SENP7Q9BQF6 1050 aa8.55□□□□□ -1.04
CLK4-202ENST00000519132 CRB3Q9BUF7 120 aa8.55□□□□□ -1.04
CLK4-202ENST00000519132 PPARGC1AQ9UBK2 798 aaKnown RBP8.55□□□□□ -1.04
CLK4-202ENST00000519132 USP19O94966 1318 aa8.55□□□□□ -1.04
CLK4-202ENST00000519132 ABCA3Q99758 1704 aa8.55□□□□□ -1.04
CLK4-202ENST00000519132 ABCC6O95255 1503 aa8.54□□□□□ -1.04
CLK4-202ENST00000519132 LOC100289279A0A1B0GTE1 492 aa8.54□□□□□ -1.04
CLK4-202ENST00000519132 STXBP3O00186 592 aa8.54□□□□□ -1.04
CLK4-202ENST00000519132 KRT37O76014 449 aa8.54□□□□□ -1.04
CLK4-202ENST00000519132 ADH7P40394 386 aa8.54□□□□□ -1.04
CLK4-202ENST00000519132 TNNT2P45379 298 aaPredicted RBP8.54□□□□□ -1.04
CLK4-202ENST00000519132 LRRC32Q14392 662 aa8.54□□□□□ -1.04
CLK4-202ENST00000519132 BBS9Q3SYG4 887 aa8.54□□□□□ -1.04
CLK4-202ENST00000519132 LVRNQ6Q4G3 990 aa8.54□□□□□ -1.04
CLK4-202ENST00000519132 ZC3H7AQ8IWR0 971 aaKnown RBP8.54□□□□□ -1.04
CLK4-202ENST00000519132 CLASRPQ8N2M8 674 aaKnown RBP8.54□□□□□ -1.04
CLK4-202ENST00000519132 DIO2Q92813 273 aa8.54□□□□□ -1.04
CLK4-202ENST00000519132 DHRS1Q96LJ7 313 aa8.54□□□□□ -1.04
CLK4-202ENST00000519132 PAGR1Q9BTK6 254 aa8.54□□□□□ -1.04
CLK4-202ENST00000519132 KCNK4Q9NYG8 393 aa8.54□□□□□ -1.04
CLK4-202ENST00000519132 hCG_1984214I3L0E3 225 aa8.54□□□□□ -1.04
CLK4-202ENST00000519132 AUHQ13825 339 aaKnown RBP8.54□□□□□ -1.04
CLK4-202ENST00000519132 SLC35F1Q5T1Q4 408 aa8.54□□□□□ -1.04
CLK4-202ENST00000519132 GJA10Q969M2 543 aa8.54□□□□□ -1.04
CLK4-202ENST00000519132 MAN1C1Q9NR34 630 aa8.54□□□□□ -1.04
CLK4-202ENST00000519132 ARHGEF10O15013 1369 aa8.54□□□□□ -1.04
CLK4-202ENST00000519132 CALRP27797 417 aaKnown RBP8.54□□□□□ -1.04
CLK4-202ENST00000519132 RECQLP46063 649 aaPredicted RBP8.54□□□□□ -1.04
CLK4-202ENST00000519132 MSL3Q8N5Y2 521 aaKnown RBP8.54□□□□□ -1.04
CLK4-202ENST00000519132 KCNH5Q8NCM2 988 aa8.54□□□□□ -1.04
CLK4-202ENST00000519132 TRMT2BQ96GJ1 504 aaKnown RBP8.54□□□□□ -1.04
CLK4-202ENST00000519132 NUB1Q9Y5A7 615 aa8.54□□□□□ -1.04
CLK4-202ENST00000519132 RTL1A6NKG5 1358 aa8.54□□□□□ -1.04
CLK4-202ENST00000519132 TM4SF5O14894 197 aa8.53□□□□□ -1.04
CLK4-202ENST00000519132 DRD2P14416 443 aa8.53□□□□□ -1.04
CLK4-202ENST00000519132 YBX3P16989 372 aaKnown RBP eCLIP8.53□□□□□ -1.04
CLK4-202ENST00000519132 SCRN1Q12765 414 aa8.53□□□□□ -1.04
CLK4-202ENST00000519132 SLBPQ14493 270 aaKnown RBP eCLIP8.53□□□□□ -1.04
CLK4-202ENST00000519132 SPATA31A3Q5VYP0 1347 aa8.53□□□□□ -1.04
CLK4-202ENST00000519132 CREB3L3Q68CJ9 461 aa8.53□□□□□ -1.04
CLK4-202ENST00000519132 UBE2R2Q712K3 238 aaPredicted RBP8.53□□□□□ -1.04
CLK4-202ENST00000519132 FIBCD1Q8N539 461 aa8.53□□□□□ -1.04
CLK4-202ENST00000519132 COL22A1Q8NFW1 1626 aaPredicted RBP8.53□□□□□ -1.04
CLK4-202ENST00000519132 TEKT5Q96M29 485 aa8.53□□□□□ -1.04
CLK4-202ENST00000519132 CAMKK2Q96RR4 588 aa8.53□□□□□ -1.04
CLK4-202ENST00000519132 PHF20Q9BVI0 1012 aa8.53□□□□□ -1.04
CLK4-202ENST00000519132 RCAN3Q9UKA8 241 aa8.53□□□□□ -1.04
CLK4-202ENST00000519132 TGM5O43548 720 aa8.53□□□□□ -1.04
CLK4-202ENST00000519132 PPM1BO75688 479 aa8.53□□□□□ -1.04
CLK4-202ENST00000519132 ALDH5A1P51649 535 aaPredicted RBP8.53□□□□□ -1.04
CLK4-202ENST00000519132 AFF1P51825 1210 aaKnown RBP8.53□□□□□ -1.04
CLK4-202ENST00000519132 GTF2A2P52657 109 aa8.53□□□□□ -1.04
CLK4-202ENST00000519132 C19orf57Q0VDD7 668 aa8.53□□□□□ -1.04
CLK4-202ENST00000519132 WDR43Q15061 677 aaKnown RBP eCLIP8.53□□□□□ -1.04
CLK4-202ENST00000519132 SCLT1Q96NL6 688 aa8.53□□□□□ -1.04
CLK4-202ENST00000519132 GTPBP4Q9BZE4 634 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms